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The map label for this gene is pecS [H]

Identifier: 238023612

GI number: 238023612

Start: 129270

End: 129809

Strand: Direct

Name: pecS [H]

Synonym: bglu_2g01170

Alternate gene names: 238023612

Gene position: 129270-129809 (Clockwise)

Preceding gene: 238023610

Following gene: 238023613

Centisome position: 4.57

GC content: 64.44

Gene sequence:

>540_bases
ATGACGGCTCTGCCCATGCAAGATCACGTCGACCTTGTCGTCGCGCAATGGCGGGACGAGCGGCCGGAGCTCGATGTGGC
GTCGATGGAGGTTCTAGGACGTCTGGCTCGCCTGGCAAAGCACTGCGAGAAGGCGAGAACCGAGGCCTTGTCGCCGTTCG
GCTTCAAGGAGGGCGAATTCGACGTGCTTGCCACGCTTCGACGGGCGGGCGCCCCCTACGAACTATCGCCGACCCAGCTA
TACCGGTCACTGATGATTACCTCAGGGGCGGTCACCCACCGGCTGATGCGGCTCGAGCAGGCCGGCCTCGTCGAGCGTGT
CCCGAATCCGCAGGACGGCCGGGGCATGGCCGTGCGATTGACTCGTGAGGGGCTCGCCCTGATCGACAAGGCGGTAAATG
TGCACGTGGACACGCAGAATCTGTTGCTCGGCGGGCTGGATCGGGACGATCGGCAAATACTTGCCGCACTTCTGAAGCGC
GCGCTTCTCGCGCTACCGGGCCAAGCACTCCTACCCGACGACGCCGCGCAATGGAGATGA

Upstream 100 bases:

>100_bases
CTCCATTGCTGCCCCCACGTGTGCCCCGTGATTATCTTAATGTTAAGATATATTGACGACAAGTGGAGCACCTGAGCCCC
TTTCAAATGCGAGGATATTG

Downstream 100 bases:

>100_bases
GGGGAGCGAATGTGACATGCCGCGCGTCGATGAGTTTAAGATGGGCACTGAAAAGATGATACCGGCGATAACAAAAATGA
TAAGGATATATCGTGCTTAA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTALPMQDHVDLVVAQWRDERPELDVASMEVLGRLARLAKHCEKARTEALSPFGFKEGEFDVLATLRRAGAPYELSPTQL
YRSLMITSGAVTHRLMRLEQAGLVERVPNPQDGRGMAVRLTREGLALIDKAVNVHVDTQNLLLGGLDRDDRQILAALLKR
ALLALPGQALLPDDAAQWR

Sequences:

>Translated_179_residues
MTALPMQDHVDLVVAQWRDERPELDVASMEVLGRLARLAKHCEKARTEALSPFGFKEGEFDVLATLRRAGAPYELSPTQL
YRSLMITSGAVTHRLMRLEQAGLVERVPNPQDGRGMAVRLTREGLALIDKAVNVHVDTQNLLLGGLDRDDRQILAALLKR
ALLALPGQALLPDDAAQWR
>Mature_178_residues
TALPMQDHVDLVVAQWRDERPELDVASMEVLGRLARLAKHCEKARTEALSPFGFKEGEFDVLATLRRAGAPYELSPTQLY
RSLMITSGAVTHRLMRLEQAGLVERVPNPQDGRGMAVRLTREGLALIDKAVNVHVDTQNLLLGGLDRDDRQILAALLKRA
LLALPGQALLPDDAAQWR

Specific function: Negative regulator of pectinase, cellulase, blue pigment production and virulence genes. Also binds to promoter sites in the pecS-pecM intergenic region and negatively autoregulate its expression as well as that of pecM [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081927, Length=134, Percent_Identity=36.5671641791045, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19851; Mature: 19720

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALPMQDHVDLVVAQWRDERPELDVASMEVLGRLARLAKHCEKARTEALSPFGFKEGEF
CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
DVLATLRRAGAPYELSPTQLYRSLMITSGAVTHRLMRLEQAGLVERVPNPQDGRGMAVRL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
TREGLALIDKAVNVHVDTQNLLLGGLDRDDRQILAALLKRALLALPGQALLPDDAAQWR
EHHHHHHHHHHHHEEECHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TALPMQDHVDLVVAQWRDERPELDVASMEVLGRLARLAKHCEKARTEALSPFGFKEGEF
CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
DVLATLRRAGAPYELSPTQLYRSLMITSGAVTHRLMRLEQAGLVERVPNPQDGRGMAVRL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
TREGLALIDKAVNVHVDTQNLLLGGLDRDDRQILAALLKRALLALPGQALLPDDAAQWR
EHHHHHHHHHHHHEEECHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8022282; 9194707 [H]