| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yceJ [H]
Identifier: 238023577
GI number: 238023577
Start: 81317
End: 81880
Strand: Reverse
Name: yceJ [H]
Synonym: bglu_2g00800
Alternate gene names: 238023577
Gene position: 81880-81317 (Counterclockwise)
Preceding gene: 238023578
Following gene: 238023576
Centisome position: 2.9
GC content: 64.01
Gene sequence:
>564_bases ATGGAAAGCCAGGCCATTGCATTCACCGCGCAGAAATACCCGCTCGCGCTCCGGCTGCTGCACTGGGTCAGGGCGATCCT GATAGGCGCGCAACTCTGGACCGGATGGACGATGGTCCGGCTCGACGACAAGCTGCCGGCCAAATTCGACTGGTACTACC CGACGCACAAGGAGTTCGGCGTGCTCACGCTGCTGGTGGTCGTCACGCAACTGGCGATTCGCGCCATGAAGCCGGTGCCG CCGCTGCCCCCCACCCTGCCGACGCTCGATCGCAGGCTCGCCAAGATCGGCCACTACCTGCTGTATGCGCTGGCGGTCAG CGTGCCGCTGATGGGCTATTCGATGTCCAGCACGTATACGCAGAGCGACGGCGTGCCGTTCTTCTTTTTCCGCGTCCCCG AGCTGCTGCCGAAGAACGACCGCTGGTTCGAGGCGTTTCAGTGGTTGCACGCGACGCTCGCCTACACCTTGCTCGCGCTC GTCGTGCTGCACGTGCTTGGCGCACTGAAGCACCGCTTCTTCGACCGCAACCCGGAACACGACGTGCTGCGGCGGATGCT GTAA
Upstream 100 bases:
>100_bases CGTCATCCTGCCGGCGGGCGACGAAGATCGGCGCGGCACGCCGCAGCCAACGGCCGGCGTTCCGCTTATTGCAATGTCGC TTGAGAGGAAGACGAGTCAC
Downstream 100 bases:
>100_bases CGCCCCCGTCACGCGGGGCCTCGCGGGCAGGCGCGGCCCCGCGTTCGGCCCGCTTGCCGGGTACGCCGCCGCCCGGGCGC TGCCGCGCCGTCGGAACTGA
Product: cytochrome B561
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MESQAIAFTAQKYPLALRLLHWVRAILIGAQLWTGWTMVRLDDKLPAKFDWYYPTHKEFGVLTLLVVVTQLAIRAMKPVP PLPPTLPTLDRRLAKIGHYLLYALAVSVPLMGYSMSSTYTQSDGVPFFFFRVPELLPKNDRWFEAFQWLHATLAYTLLAL VVLHVLGALKHRFFDRNPEHDVLRRML
Sequences:
>Translated_187_residues MESQAIAFTAQKYPLALRLLHWVRAILIGAQLWTGWTMVRLDDKLPAKFDWYYPTHKEFGVLTLLVVVTQLAIRAMKPVP PLPPTLPTLDRRLAKIGHYLLYALAVSVPLMGYSMSSTYTQSDGVPFFFFRVPELLPKNDRWFEAFQWLHATLAYTLLAL VVLHVLGALKHRFFDRNPEHDVLRRML >Mature_187_residues MESQAIAFTAQKYPLALRLLHWVRAILIGAQLWTGWTMVRLDDKLPAKFDWYYPTHKEFGVLTLLVVVTQLAIRAMKPVP PLPPTLPTLDRRLAKIGHYLLYALAVSVPLMGYSMSSTYTQSDGVPFFFFRVPELLPKNDRWFEAFQWLHATLAYTLLAL VVLHVLGALKHRFFDRNPEHDVLRRML
Specific function: Unknown
COG id: COG3038
COG function: function code C; Cytochrome B561
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome b561 family [H]
Homologues:
Organism=Escherichia coli, GI1787296, Length=186, Percent_Identity=31.1827956989247, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005797 - InterPro: IPR016174 [H]
Pfam domain/function: PF00033 Cytochrom_B_N [H]
EC number: NA
Molecular weight: Translated: 21647; Mature: 21647
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESQAIAFTAQKYPLALRLLHWVRAILIGAQLWTGWTMVRLDDKLPAKFDWYYPTHKEFG CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCHHHH VLTLLVVVTQLAIRAMKPVPPLPPTLPTLDRRLAKIGHYLLYALAVSVPLMGYSMSSTYT HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC QSDGVPFFFFRVPELLPKNDRWFEAFQWLHATLAYTLLALVVLHVLGALKHRFFDRNPEH CCCCCCCCEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DVLRRML HHHHHCC >Mature Secondary Structure MESQAIAFTAQKYPLALRLLHWVRAILIGAQLWTGWTMVRLDDKLPAKFDWYYPTHKEFG CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCHHHH VLTLLVVVTQLAIRAMKPVPPLPPTLPTLDRRLAKIGHYLLYALAVSVPLMGYSMSSTYT HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC QSDGVPFFFFRVPELLPKNDRWFEAFQWLHATLAYTLLALVVLHVLGALKHRFFDRNPEH CCCCCCCCEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DVLRRML HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]