Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is kdgR [C]

Identifier: 238023576

GI number: 238023576

Start: 79838

End: 80566

Strand: Reverse

Name: kdgR [C]

Synonym: bglu_2g00780

Alternate gene names: 238023576

Gene position: 80566-79838 (Counterclockwise)

Preceding gene: 238023577

Following gene: 238023566

Centisome position: 2.85

GC content: 65.29

Gene sequence:

>729_bases
ATGTCGAGCCTCACCAAAATGCTGTCCATCCTCGACGTCTTCTCTTCGTCCGCGATGTCGATGACCGCCGAGGAAATCGC
CGAGCATCTGGGCTTCTCGCGCACCACTTGCTACCGTTACGTGAAGGAGCTGGCTTCGGTCGGCCTGCTCGTCGGCACCA
ACGGCCGCTATACGCTCGGCCCGCGCATCATCCATCTCGACTACAACATGCGGCAGTCGGACCCGACGCTGACCGCCGCA
CGGCCCGTCATCCAGAAACTGGTTCAGGTCACCGGCGGCGACGCGCTCGTCTCGACGCTGTTCGACGAGCAAATCATCAA
CGTGATGCACGAAACCGGCGCCGAGAACCTGCAGCTGGGCTTCGGCCGCGGCCGCATCATGCCGCTGTTCCAGGGTGCGT
CGTCGAAAGTGATCGTGGCCGCGATGTCGCGCTCGCGGCTGAAGCGCCTGCACGAACGGCACCACGCCGAGCTGGGCGAG
TTCGCCGCCGACTGGACGCAGTTCTGGCGTGCCTGCCAGCAGATCGTCGAGGCCGGATACTGCATCTCGCGGGGCGAGCT
GGACGCCGGGTTCGTCGGCATCGCCGCGCCGATCCGCACGGCCAGCAGCGGCGAGATCAACAGCAGCCTGTCGCTGATCT
TTCGCGCCGAACACTTCGCGCTGTTCGACGAACAGGTACTCGGCAAGCTCCTGATCGACGCCACGGCACGGATCGGCGAC
GCCACCTGA

Upstream 100 bases:

>100_bases
AGGGCCTGCTGCCCGCGGCCGCGCATGCCGTGCCGCAGCCCGACCCGCGTTCGTCTTCCCCGTTCCATTGCCGCCAGCCG
TCTGAATCCCGGATCCCCTC

Downstream 100 bases:

>100_bases
GCCTGCCTGCGGCGCCGCCAGCGAGGCGCCGGCCGATCGCCCGGCCGCGCGCGCTCAATTCATCTGCGTGATGAACTTGG
TGACCAGGTAGCCGTCGAAG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator IclR Family; Regulatory Proteins IclR; Transcriptional Regulator Family; Transcription Regulator Protein; IclR Helix-Turn-Helix Domain-Containing; Transcriptional Regulatory Protein; Helix-Turn-Helix Type; DeoR-Like Helix-Turn-Helix Domain-Containing; Regulatory Protein IclR; IclR Family Transcription Regulator Protein; Transcriptional Regulator Family Protein; IclR-Family Transcriptional Regulator

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSSLTKMLSILDVFSSSAMSMTAEEIAEHLGFSRTTCYRYVKELASVGLLVGTNGRYTLGPRIIHLDYNMRQSDPTLTAA
RPVIQKLVQVTGGDALVSTLFDEQIINVMHETGAENLQLGFGRGRIMPLFQGASSKVIVAAMSRSRLKRLHERHHAELGE
FAADWTQFWRACQQIVEAGYCISRGELDAGFVGIAAPIRTASSGEINSSLSLIFRAEHFALFDEQVLGKLLIDATARIGD
AT

Sequences:

>Translated_242_residues
MSSLTKMLSILDVFSSSAMSMTAEEIAEHLGFSRTTCYRYVKELASVGLLVGTNGRYTLGPRIIHLDYNMRQSDPTLTAA
RPVIQKLVQVTGGDALVSTLFDEQIINVMHETGAENLQLGFGRGRIMPLFQGASSKVIVAAMSRSRLKRLHERHHAELGE
FAADWTQFWRACQQIVEAGYCISRGELDAGFVGIAAPIRTASSGEINSSLSLIFRAEHFALFDEQVLGKLLIDATARIGD
AT
>Mature_241_residues
SSLTKMLSILDVFSSSAMSMTAEEIAEHLGFSRTTCYRYVKELASVGLLVGTNGRYTLGPRIIHLDYNMRQSDPTLTAAR
PVIQKLVQVTGGDALVSTLFDEQIINVMHETGAENLQLGFGRGRIMPLFQGASSKVIVAAMSRSRLKRLHERHHAELGEF
AADWTQFWRACQQIVEAGYCISRGELDAGFVGIAAPIRTASSGEINSSLSLIFRAEHFALFDEQVLGKLLIDATARIGDA
T

Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26511; Mature: 26380

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLTKMLSILDVFSSSAMSMTAEEIAEHLGFSRTTCYRYVKELASVGLLVGTNGRYTLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCEEEC
PRIIHLDYNMRQSDPTLTAARPVIQKLVQVTGGDALVSTLFDEQIINVMHETGAENLQLG
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
FGRGRIMPLFQGASSKVIVAAMSRSRLKRLHERHHAELGEFAADWTQFWRACQQIVEAGY
CCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
CISRGELDAGFVGIAAPIRTASSGEINSSLSLIFRAEHFALFDEQVLGKLLIDATARIGD
EECCCCCCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AT
CC
>Mature Secondary Structure 
SSLTKMLSILDVFSSSAMSMTAEEIAEHLGFSRTTCYRYVKELASVGLLVGTNGRYTLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCEEEC
PRIIHLDYNMRQSDPTLTAARPVIQKLVQVTGGDALVSTLFDEQIINVMHETGAENLQLG
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
FGRGRIMPLFQGASSKVIVAAMSRSRLKRLHERHHAELGEFAADWTQFWRACQQIVEAGY
CCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
CISRGELDAGFVGIAAPIRTASSGEINSSLSLIFRAEHFALFDEQVLGKLLIDATARIGD
EECCCCCCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AT
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA