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The map label for this gene is yjdC [C]

Identifier: 238023513

GI number: 238023513

Start: 13544

End: 14221

Strand: Direct

Name: yjdC [C]

Synonym: bglu_2g00130

Alternate gene names: 238023513

Gene position: 13544-14221 (Clockwise)

Preceding gene: 238023510

Following gene: 238023514

Centisome position: 0.48

GC content: 73.16

Gene sequence:

>678_bases
TTGACAAGGGAGAACGATCGTTCTACCTTGTGCGGCATGAACCATCCGACCCAATCCCCGCCGCGCGCCGGCGAGGCGCC
CGACCCGCAGGCCGGCGGCGCGCGCGAGCGGCTGCTCGAGGCGGCCGAGGCGCTCTTCTACGCGGGCGGCATCCACGCGA
CCGGCGTCGATGCGATCGTCAAGCGCTCGGGCGCTGCGCGCAAGAGCTTCTACACGCATTTCGAATCGAAGGAAGCGCTG
GTGGCCGCCGCGCTCGCGCGGCGCGACGAACGCTGGATGGCCTGGTTCGTCGACGGCACGCTCGAGCGCGGGCGCACGCC
GCGTGCCCGCCTGCTGGCGATGTTCGACGTGCTGCATGGTTGGTTCGAGCAGCCCGGCTTCCATGGCTGCGCGTTCATCA
ACGCGGCCGGCGAGATCGGCGATGCGGGCGATCCGATTCGCGGCGTGGCGCGCTATCACAAGGCGCGGCTGCTCGACTTC
GCGCGCGCGCAGAGCGAGGCGTTCGCGCAGGCCTGCGGCGCGTCGCAGCCCGACGCCGCGCGGCTCGCGCGCCAGTGGCT
GGTGCTGATGGACGGCGCGATCGCGGTGGCCCTCGTGAGCGGCGACCCCTCGGCCGCTCGCGATGCGCGCGAGGCCGGCG
AGGCGCTGCTGGCCGCGTTCGAGGCGCGCGCCGCATGA

Upstream 100 bases:

>100_bases
ATGTCCGTCTCTCCTGTCCCGGTCCGCGCACGATAGCGCATCCGGGCCGGGCGCGCCGGGCCGTCAGCGGCAAGATTCGG
CGGGTTTCGCCGACGCACCC

Downstream 100 bases:

>100_bases
TGGCGGCGCCGCGCGGAAATGTTTTGCGATCCTGATGAAGCCTGGAGAATACGATGACCGAAATCAGTGAAGTCCGCCCG
CCGGTGCCGCCGTTTTCGCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein; Regulatory Protein; Transcriptional Regulator Tetr Family; Transcriptional Regulator Protein; Transcriptional Regulatory Protein; Transcription Regulator Protein; Transcription Regulator TetR; TetR-Family Protein Transcriptional Regulator; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; TetR/AcrR-Family Trancriptional Regulatory Protein

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTRENDRSTLCGMNHPTQSPPRAGEAPDPQAGGARERLLEAAEALFYAGGIHATGVDAIVKRSGAARKSFYTHFESKEAL
VAAALARRDERWMAWFVDGTLERGRTPRARLLAMFDVLHGWFEQPGFHGCAFINAAGEIGDAGDPIRGVARYHKARLLDF
ARAQSEAFAQACGASQPDAARLARQWLVLMDGAIAVALVSGDPSAARDAREAGEALLAAFEARAA

Sequences:

>Translated_225_residues
MTRENDRSTLCGMNHPTQSPPRAGEAPDPQAGGARERLLEAAEALFYAGGIHATGVDAIVKRSGAARKSFYTHFESKEAL
VAAALARRDERWMAWFVDGTLERGRTPRARLLAMFDVLHGWFEQPGFHGCAFINAAGEIGDAGDPIRGVARYHKARLLDF
ARAQSEAFAQACGASQPDAARLARQWLVLMDGAIAVALVSGDPSAARDAREAGEALLAAFEARAA
>Mature_224_residues
TRENDRSTLCGMNHPTQSPPRAGEAPDPQAGGARERLLEAAEALFYAGGIHATGVDAIVKRSGAARKSFYTHFESKEALV
AAALARRDERWMAWFVDGTLERGRTPRARLLAMFDVLHGWFEQPGFHGCAFINAAGEIGDAGDPIRGVARYHKARLLDFA
RAQSEAFAQACGASQPDAARLARQWLVLMDGAIAVALVSGDPSAARDAREAGEALLAAFEARAA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24117; Mature: 23986

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRENDRSTLCGMNHPTQSPPRAGEAPDPQAGGARERLLEAAEALFYAGGIHATGVDAIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
KRSGAARKSFYTHFESKEALVAAALARRDERWMAWFVDGTLERGRTPRARLLAMFDVLHG
HHCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHEEEEECCHHHCCCCHHHHHHHHHHHHHH
WFEQPGFHGCAFINAAGEIGDAGDPIRGVARYHKARLLDFARAQSEAFAQACGASQPDAA
HHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RLARQWLVLMDGAIAVALVSGDPSAARDAREAGEALLAAFEARAA
HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRENDRSTLCGMNHPTQSPPRAGEAPDPQAGGARERLLEAAEALFYAGGIHATGVDAIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
KRSGAARKSFYTHFESKEALVAAALARRDERWMAWFVDGTLERGRTPRARLLAMFDVLHG
HHCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHEEEEECCHHHCCCCHHHHHHHHHHHHHH
WFEQPGFHGCAFINAAGEIGDAGDPIRGVARYHKARLLDFARAQSEAFAQACGASQPDAA
HHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RLARQWLVLMDGAIAVALVSGDPSAARDAREAGEALLAAFEARAA
HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA