| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023514
Identifier: 238023514
GI number: 238023514
Start: 14275
End: 14754
Strand: Direct
Name: 238023514
Synonym: bglu_2g00140
Alternate gene names: NA
Gene position: 14275-14754 (Clockwise)
Preceding gene: 238023513
Following gene: 238023516
Centisome position: 0.5
GC content: 67.29
Gene sequence:
>480_bases ATGACCGAAATCAGTGAAGTCCGCCCGCCGGTGCCGCCGTTTTCGCGCGACACCGCCATCCAGAAGGTGCGTGCCGCCGA AGACGGCTGGAACACCCGCGATCCGCAGCGCGTGTCGCTCGCCTACACGCGCGACAGCAAGTGGCGCAACCGTGCCGAGT TCGTGACCGGCCGCGAGGCGATCGTCGGCCTGCTCACGCGCAAGTGGGCGCGCGAGTTGGACTATCGCCTGATCAAGGAG CTGTGGGCGTTCGACGGCAACCGCATCGCCGTGCGCTTCGCCTATGAATGGCACGACGACGCCGGCAACTGGTTCCGCTC GTATGGCAACGAGAACTGGGAGTTCGACGAGAACGGCCTGATGGCGCACCGCCACGCGAGCATCAACGACCTGCCGATCC GCGAGCAGGATCGGCTGTTCAAGTGGCCGCTCGGCCGCCGTCCCGACGACCACCCCGGCCTGTCGGCCCTCGGGCTGTAA
Upstream 100 bases:
>100_bases AGGCCGGCGAGGCGCTGCTGGCCGCGTTCGAGGCGCGCGCCGCATGATGGCGGCGCCGCGCGGAAATGTTTTGCGATCCT GATGAAGCCTGGAGAATACG
Downstream 100 bases:
>100_bases GGCCCGCGGCGCGGCATGCCGCTCGCGGCTCGGCCGCGCGGCCCGAGGGTGAGCCGATACGGGAGCCGAACGCGCGCTGA GGTGAGTCTTTTCGGGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTEISEVRPPVPPFSRDTAIQKVRAAEDGWNTRDPQRVSLAYTRDSKWRNRAEFVTGREAIVGLLTRKWARELDYRLIKE LWAFDGNRIAVRFAYEWHDDAGNWFRSYGNENWEFDENGLMAHRHASINDLPIREQDRLFKWPLGRRPDDHPGLSALGL
Sequences:
>Translated_159_residues MTEISEVRPPVPPFSRDTAIQKVRAAEDGWNTRDPQRVSLAYTRDSKWRNRAEFVTGREAIVGLLTRKWARELDYRLIKE LWAFDGNRIAVRFAYEWHDDAGNWFRSYGNENWEFDENGLMAHRHASINDLPIREQDRLFKWPLGRRPDDHPGLSALGL >Mature_158_residues TEISEVRPPVPPFSRDTAIQKVRAAEDGWNTRDPQRVSLAYTRDSKWRNRAEFVTGREAIVGLLTRKWARELDYRLIKEL WAFDGNRIAVRFAYEWHDDAGNWFRSYGNENWEFDENGLMAHRHASINDLPIREQDRLFKWPLGRRPDDHPGLSALGL
Specific function: Unknown
COG id: COG3558
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18722; Mature: 18591
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEISEVRPPVPPFSRDTAIQKVRAAEDGWNTRDPQRVSLAYTRDSKWRNRAEFVTGREA CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH IVGLLTRKWARELDYRLIKELWAFDGNRIAVRFAYEWHDDAGNWFRSYGNENWEFDENGL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCC MAHRHASINDLPIREQDRLFKWPLGRRPDDHPGLSALGL EEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TEISEVRPPVPPFSRDTAIQKVRAAEDGWNTRDPQRVSLAYTRDSKWRNRAEFVTGREA CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH IVGLLTRKWARELDYRLIKELWAFDGNRIAVRFAYEWHDDAGNWFRSYGNENWEFDENGL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCC MAHRHASINDLPIREQDRLFKWPLGRRPDDHPGLSALGL EEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA