| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814459
Identifier: 237814459
GI number: 237814459
Start: 4076742
End: 4077578
Strand: Reverse
Name: 237814459
Synonym: GBP346_A4257
Alternate gene names: NA
Gene position: 4077578-4076742 (Counterclockwise)
Preceding gene: 237814460
Following gene: 237814458
Centisome position: 99.49
GC content: 72.16
Gene sequence:
>837_bases ATGACGCAACCTACCGCGAGACATCTGATCCTCGATTTGCTGGTCGCCAAGGACGGCGAGCCGATGCAAGTGCGCGAAGC GATCATCGCGTGCCGGCTGTTCGGCCTCACCGAAAACAGCGTGCGAGTCGCGCTCGCGCGGCTGGCGGCCGAATCGCTCG TCGAGGGGGCGGAGCGCGGCAGCTACCGGCTCGGGCCGTCGGCCGTCGAGCTGTCCGAGGAGTTGACCGCGTGGCGCACC GTCGAATCGCGGCTGCGCCGCTGGAGCGGCGCGTACCTGATGGTGTCGTGCATCTCGCTCGGCCGGGTCGACCGCACCGC CCTCGCCCGCCGCGAGCGCGCGCTCGAGATGCTCGGCTTCCGCGAATGGGACAAGAGCCTGTACGTACGCCCGGACAACA TCGCCGGCAATGTCGACTCGGTGCGCCGGCGGCTGACCAAGCTCGGCGTCGAGCCGGCGGCGGCCGTGTTCGTCGCGATG GGCTTCGACGCCCCGCAGGAAGCGCGCATCCGCGCGCTGTGGGACGGCGACGCGCTGTCGGACACGTACCGCACGCTCGG CGCGCAGCTCGAAGACTGGCTTGCGCGCGCGCCGGAGCTCGATCTCGACGTGGCCGCGCGCGAGGCGTTCCTGCTCGGCG GCAAGGCGATCCGGCAGGTCGTCTTCGATCCGCTGCTGCCGGAGCCGTTCGTCGACGTCGACGCGCGCGCGGCGTTCATC GAATGCGCGCGGCGCTACGTCGGCGCGGGCCACCGGATCTGGCGCGCCCTCCTCGACAGCGAGCACCCGTCCGCGCCGGG CGCGGCGCGCGACGCGATCGTGGGCCACCTGCACTAG
Upstream 100 bases:
>100_bases CACCGCCATTTCCTTCGTTGTCCCCTTGAAACATTACACAAAATTCTATATAAATAAATCTTGAGTAATCACCTTTTGTT TTCCAGCCGCGAAACTTCCC
Downstream 100 bases:
>100_bases CGCGAGAAGCGGCTGGAGGAGATATCGACATGAACGACAGAATCCGCATTCGCGATCTCTTCACCCGCGACGAGATCCGC GCGCTGACCGCGCGCTCGAA
Product: PaaX domain protein, C- domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTQPTARHLILDLLVAKDGEPMQVREAIIACRLFGLTENSVRVALARLAAESLVEGAERGSYRLGPSAVELSEELTAWRT VESRLRRWSGAYLMVSCISLGRVDRTALARRERALEMLGFREWDKSLYVRPDNIAGNVDSVRRRLTKLGVEPAAAVFVAM GFDAPQEARIRALWDGDALSDTYRTLGAQLEDWLARAPELDLDVAAREAFLLGGKAIRQVVFDPLLPEPFVDVDARAAFI ECARRYVGAGHRIWRALLDSEHPSAPGAARDAIVGHLH
Sequences:
>Translated_278_residues MTQPTARHLILDLLVAKDGEPMQVREAIIACRLFGLTENSVRVALARLAAESLVEGAERGSYRLGPSAVELSEELTAWRT VESRLRRWSGAYLMVSCISLGRVDRTALARRERALEMLGFREWDKSLYVRPDNIAGNVDSVRRRLTKLGVEPAAAVFVAM GFDAPQEARIRALWDGDALSDTYRTLGAQLEDWLARAPELDLDVAAREAFLLGGKAIRQVVFDPLLPEPFVDVDARAAFI ECARRYVGAGHRIWRALLDSEHPSAPGAARDAIVGHLH >Mature_277_residues TQPTARHLILDLLVAKDGEPMQVREAIIACRLFGLTENSVRVALARLAAESLVEGAERGSYRLGPSAVELSEELTAWRTV ESRLRRWSGAYLMVSCISLGRVDRTALARRERALEMLGFREWDKSLYVRPDNIAGNVDSVRRRLTKLGVEPAAAVFVAMG FDAPQEARIRALWDGDALSDTYRTLGAQLEDWLARAPELDLDVAAREAFLLGGKAIRQVVFDPLLPEPFVDVDARAAFIE CARRYVGAGHRIWRALLDSEHPSAPGAARDAIVGHLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30779; Mature: 30647
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPTARHLILDLLVAKDGEPMQVREAIIACRLFGLTENSVRVALARLAAESLVEGAERG CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC SYRLGPSAVELSEELTAWRTVESRLRRWSGAYLMVSCISLGRVDRTALARRERALEMLGF CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH REWDKSLYVRPDNIAGNVDSVRRRLTKLGVEPAAAVFVAMGFDAPQEARIRALWDGDALS HHHCCCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCEEEEECCCHHH DTYRTLGAQLEDWLARAPELDLDVAAREAFLLGGKAIRQVVFDPLLPEPFVDVDARAAFI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ECARRYVGAGHRIWRALLDSEHPSAPGAARDAIVGHLH HHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure TQPTARHLILDLLVAKDGEPMQVREAIIACRLFGLTENSVRVALARLAAESLVEGAERG CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC SYRLGPSAVELSEELTAWRTVESRLRRWSGAYLMVSCISLGRVDRTALARRERALEMLGF CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH REWDKSLYVRPDNIAGNVDSVRRRLTKLGVEPAAAVFVAMGFDAPQEARIRALWDGDALS HHHCCCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCEEEEECCCHHH DTYRTLGAQLEDWLARAPELDLDVAAREAFLLGGKAIRQVVFDPLLPEPFVDVDARAAFI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ECARRYVGAGHRIWRALLDSEHPSAPGAARDAIVGHLH HHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA