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The map label for this gene is 237814458

Identifier: 237814458

GI number: 237814458

Start: 4075726

End: 4076712

Strand: Reverse

Name: 237814458

Synonym: GBP346_A4256

Alternate gene names: NA

Gene position: 4076712-4075726 (Counterclockwise)

Preceding gene: 237814459

Following gene: 237814457

Centisome position: 99.47

GC content: 70.11

Gene sequence:

>987_bases
ATGAACGACAGAATCCGCATTCGCGATCTCTTCACCCGCGACGAGATCCGCGCGCTGACCGCGCGCTCGAACTGGCGCGG
CGCGTGGGCGGTCGGCTCGACGTGGGCGGTGATCGCGCTCGCGTTCGCGGGCCTCGCGTATGCGCGCGCGCATTTTCCGG
CCTGGGGCTTCGCGCTCGCGCTCGCGGCCGGCATGACGATCATCGCCGGACGCCAGCTCTGCCTCGGCATCCTCCAGCAC
GACGCCGCGCACGGCACGCTGTTTCGCACGCGCTGGGCGAACGACGTGCTCGTCGACTGGCTCTGCGCGCGGCCGATCTG
GAACGCGCTGCACAAGTATCGCCCGTATCACCTGATGCACCATGCGACGACGTCGTCGCGCGCCGATCCCGACCTGTCGC
TCGTCGCGGGCCTGCCGACGACGCGCGCCTCGCTCGCGCGCAAGTGCCTGCGCGACCTCTCGGGCGTCACGGGCATCAAG
TTCCTGATCGGCCGGGCGCTGATGGACGCGGGCGTGCTCCAGTGGTCGCTGACGAACGACATCCGGCGCCTGCCGCAGAC
GGGCCGCCGCTGGTGGGACTATCCGCGCGCGTTCCTGCGCGCCGCGGCCGGCATGCTGATCACGAACGCCATCCTGCTCG
GCGCACTGTGGGCGAGCGGCCATCCGTGGCTGTACGGCGTCTGGGTGCTCGCGTACGTGACGCCGTTCCCGCTGTTCATC
CGCATCCGCTCGATGGCCGAACACGCATGCCTCGAAACGAGCGACGATCCGCTGCGCAACACGCGCACGACGCATGCCGG
CTGGCTCGCGCGCGCAACCGTCGCGCCGATCCGCGTGAACTACCACGTCGAACATCACCTGATGGCGTCGGTGCCGTACT
TCCGGCTGCCGAAGATGCACCGGATGCTGCGTGCGCGCGGCTGCGTCGCGCGGCCGCCGTCGTACTGGCAGGTATTGAGG
ACCGTCAGCGCGAAGACGGCGGCTTGA

Upstream 100 bases:

>100_bases
CCCTCCTCGACAGCGAGCACCCGTCCGCGCCGGGCGCGGCGCGCGACGCGATCGTGGGCCACCTGCACTAGCGCGAGAAG
CGGCTGGAGGAGATATCGAC

Downstream 100 bases:

>100_bases
ACGCATCGAGCCGGCGGCATTCCATGACGCGCTCCTCGCGCACCCGCGCCTCGGATGTCGCCGCCACGCGATCGGCCTCA
TTGCGCGCAGTCGATCCGAT

Product: stearoyl-CoA 9-desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Subfamily Protein

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNDRIRIRDLFTRDEIRALTARSNWRGAWAVGSTWAVIALAFAGLAYARAHFPAWGFALALAAGMTIIAGRQLCLGILQH
DAAHGTLFRTRWANDVLVDWLCARPIWNALHKYRPYHLMHHATTSSRADPDLSLVAGLPTTRASLARKCLRDLSGVTGIK
FLIGRALMDAGVLQWSLTNDIRRLPQTGRRWWDYPRAFLRAAAGMLITNAILLGALWASGHPWLYGVWVLAYVTPFPLFI
RIRSMAEHACLETSDDPLRNTRTTHAGWLARATVAPIRVNYHVEHHLMASVPYFRLPKMHRMLRARGCVARPPSYWQVLR
TVSAKTAA

Sequences:

>Translated_328_residues
MNDRIRIRDLFTRDEIRALTARSNWRGAWAVGSTWAVIALAFAGLAYARAHFPAWGFALALAAGMTIIAGRQLCLGILQH
DAAHGTLFRTRWANDVLVDWLCARPIWNALHKYRPYHLMHHATTSSRADPDLSLVAGLPTTRASLARKCLRDLSGVTGIK
FLIGRALMDAGVLQWSLTNDIRRLPQTGRRWWDYPRAFLRAAAGMLITNAILLGALWASGHPWLYGVWVLAYVTPFPLFI
RIRSMAEHACLETSDDPLRNTRTTHAGWLARATVAPIRVNYHVEHHLMASVPYFRLPKMHRMLRARGCVARPPSYWQVLR
TVSAKTAA
>Mature_328_residues
MNDRIRIRDLFTRDEIRALTARSNWRGAWAVGSTWAVIALAFAGLAYARAHFPAWGFALALAAGMTIIAGRQLCLGILQH
DAAHGTLFRTRWANDVLVDWLCARPIWNALHKYRPYHLMHHATTSSRADPDLSLVAGLPTTRASLARKCLRDLSGVTGIK
FLIGRALMDAGVLQWSLTNDIRRLPQTGRRWWDYPRAFLRAAAGMLITNAILLGALWASGHPWLYGVWVLAYVTPFPLFI
RIRSMAEHACLETSDDPLRNTRTTHAGWLARATVAPIRVNYHVEHHLMASVPYFRLPKMHRMLRARGCVARPPSYWQVLR
TVSAKTAA

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36957; Mature: 36957

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRIRIRDLFTRDEIRALTARSNWRGAWAVGSTWAVIALAFAGLAYARAHFPAWGFALA
CCCCEEHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
LAAGMTIIAGRQLCLGILQHDAAHGTLFRTRWANDVLVDWLCARPIWNALHKYRPYHLMH
HHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
HATTSSRADPDLSLVAGLPTTRASLARKCLRDLSGVTGIKFLIGRALMDAGVLQWSLTND
HCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHHHH
IRRLPQTGRRWWDYPRAFLRAAAGMLITNAILLGALWASGHPWLYGVWVLAYVTPFPLFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH
RIRSMAEHACLETSDDPLRNTRTTHAGWLARATVAPIRVNYHVEHHLMASVPYFRLPKMH
HHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHEECEEEEEEEEHHHHHHHCCHHHCHHHH
RMLRARGCVARPPSYWQVLRTVSAKTAA
HHHHHCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNDRIRIRDLFTRDEIRALTARSNWRGAWAVGSTWAVIALAFAGLAYARAHFPAWGFALA
CCCCEEHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
LAAGMTIIAGRQLCLGILQHDAAHGTLFRTRWANDVLVDWLCARPIWNALHKYRPYHLMH
HHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
HATTSSRADPDLSLVAGLPTTRASLARKCLRDLSGVTGIKFLIGRALMDAGVLQWSLTND
HCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHHHH
IRRLPQTGRRWWDYPRAFLRAAAGMLITNAILLGALWASGHPWLYGVWVLAYVTPFPLFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH
RIRSMAEHACLETSDDPLRNTRTTHAGWLARATVAPIRVNYHVEHHLMASVPYFRLPKMH
HHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHEECEEEEEEEEHHHHHHHCCHHHCHHHH
RMLRARGCVARPPSYWQVLRTVSAKTAA
HHHHHCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA