| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813466
Identifier: 237813466
GI number: 237813466
Start: 3130329
End: 3130586
Strand: Direct
Name: 237813466
Synonym: GBP346_A3242
Alternate gene names: NA
Gene position: 3130329-3130586 (Clockwise)
Preceding gene: 237813465
Following gene: 237813467
Centisome position: 76.38
GC content: 67.44
Gene sequence:
>258_bases ATGCGCACCACGCAAGCGACCCGCGCGGTCGAACGCCTCAGAGCCCGCGCCGGCAATCCGCAGTATTCGGCGGTCGGCAT GCCGGGCGGCCTCTTCTACCTCGTCGACCGCTCGAGCGGCGCCGCCGAGAAGCTGTGCGCGCCGATGCCGCTCGAGGATT TCGTCGCGTTCGTCGACGGCCTCGGCCCGAAAAAGCCGCGCAAGGTCAGCAAGCTCGACGTCGCGTTCGAGCAGCAGATC AAGAACAGCAAGCGCTAA
Upstream 100 bases:
>100_bases CTATTCGAAGACGGTCTGAGCGCGCCGGCCGCCGCGGCGCGCGCGGCCCGGGTTGTTGATAAAGTGTCGGTTTCCTCGCA CTTTCGCTTTTGACGCCACG
Downstream 100 bases:
>100_bases GGCGCTTCGGATCGCAGGCGTTCTGAAGGCAAGACGTCGACCCCGTTTGGTACAATTCGAGAGTTTTTCGTCCCCTCGCT GACGGCCGTCCAGGCCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MRTTQATRAVERLRARAGNPQYSAVGMPGGLFYLVDRSSGAAEKLCAPMPLEDFVAFVDGLGPKKPRKVSKLDVAFEQQI KNSKR
Sequences:
>Translated_85_residues MRTTQATRAVERLRARAGNPQYSAVGMPGGLFYLVDRSSGAAEKLCAPMPLEDFVAFVDGLGPKKPRKVSKLDVAFEQQI KNSKR >Mature_85_residues MRTTQATRAVERLRARAGNPQYSAVGMPGGLFYLVDRSSGAAEKLCAPMPLEDFVAFVDGLGPKKPRKVSKLDVAFEQQI KNSKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9325; Mature: 9325
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTQATRAVERLRARAGNPQYSAVGMPGGLFYLVDRSSGAAEKLCAPMPLEDFVAFVDG CCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCHHHHCCCCCHHHHHHHHHC LGPKKPRKVSKLDVAFEQQIKNSKR CCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTTQATRAVERLRARAGNPQYSAVGMPGGLFYLVDRSSGAAEKLCAPMPLEDFVAFVDG CCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCHHHHCCCCCHHHHHHHHHC LGPKKPRKVSKLDVAFEQQIKNSKR CCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA