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The map label for this gene is pcm1 [H]

Identifier: 237813467

GI number: 237813467

Start: 3130694

End: 3131347

Strand: Direct

Name: pcm1 [H]

Synonym: GBP346_A3243

Alternate gene names: 237813467

Gene position: 3130694-3131347 (Clockwise)

Preceding gene: 237813466

Following gene: 237813468

Centisome position: 76.38

GC content: 64.68

Gene sequence:

>654_bases
ATGAATATCGAAAAAGCACGTTTCAACATGATCGAACAGCAGATCCGGCCTTGGGATGTACTGGATCAGGACGTCTTGAG
CCTGCTGTCGGTCGTCAAGCGTGAGAATTTCGTGCCGGCCGCGTATCGCGACCTGGCGTTCGCCGACGTCGAGCTGCCGC
TGCCGAGCGGCCAGAAGATGCTGTTCCCGCGCGTCGAGGCCCGCATCCTGCAGGAGCTCGCGGTGAAGAAGCACGAGAAC
GTGCTCGAGATCGGGGCGGGCTGCGGCTACATGGCGGCCTTGCTGGCCGCGCGCGGCCAGCGCGTGACGACGGTCGAGAT
CGATCCGGATCTCGCGAAGTTCGCCGAAGAGAACCTGAAGAAGAACGGCGTGACGAACGCCGAGGTCGTGCTCGGCGACG
GCTCGCGCGGCTGGCCCGCGAAAGCGCCGTACGACGTGATCTGCGTGTCGGGCGGCCTGCCCGTCGTCCCGCAGGAACTG
CTCGAGCAACTGAAGGTGGGCGGCCGCCTCGCGGCGTTCGTCGGCGGCCGGCCGGTGATGAAGGCGCAGATCATCACGCG
CATCGACGACACGCAATATCGCGTCGCCGACGTATTCGAGACCTACGTCGATCACCTCGTCAACGCGATCGAGCCGTCGC
GCTTCAAGTTCTGA

Upstream 100 bases:

>100_bases
CGGATCGCAGGCGTTCTGAAGGCAAGACGTCGACCCCGTTTGGTACAATTCGAGAGTTTTTCGTCCCCTCGCTGACGGCC
GTCCAGGCCCGCATGACACC

Downstream 100 bases:

>100_bases
GGCCCCGCGTGCCGATGCAGATCCTGAGCGCTTCCGCCCTCGCCGAATGGCTGCGCGACCCGGCGCGCCCGGCGCCCATC
GTGCTCGACGTGCGCGAGCC

Product: protein-L-isoaspartate

Products: NA

Alternate protein names: L-isoaspartyl protein carboxyl methyltransferase 1; Protein L-isoaspartyl methyltransferase 1; Protein-beta-aspartate methyltransferase 1; PIMT 1 [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNIEKARFNMIEQQIRPWDVLDQDVLSLLSVVKRENFVPAAYRDLAFADVELPLPSGQKMLFPRVEARILQELAVKKHEN
VLEIGAGCGYMAALLAARGQRVTTVEIDPDLAKFAEENLKKNGVTNAEVVLGDGSRGWPAKAPYDVICVSGGLPVVPQEL
LEQLKVGGRLAAFVGGRPVMKAQIITRIDDTQYRVADVFETYVDHLVNAIEPSRFKF

Sequences:

>Translated_217_residues
MNIEKARFNMIEQQIRPWDVLDQDVLSLLSVVKRENFVPAAYRDLAFADVELPLPSGQKMLFPRVEARILQELAVKKHEN
VLEIGAGCGYMAALLAARGQRVTTVEIDPDLAKFAEENLKKNGVTNAEVVLGDGSRGWPAKAPYDVICVSGGLPVVPQEL
LEQLKVGGRLAAFVGGRPVMKAQIITRIDDTQYRVADVFETYVDHLVNAIEPSRFKF
>Mature_217_residues
MNIEKARFNMIEQQIRPWDVLDQDVLSLLSVVKRENFVPAAYRDLAFADVELPLPSGQKMLFPRVEARILQELAVKKHEN
VLEIGAGCGYMAALLAARGQRVTTVEIDPDLAKFAEENLKKNGVTNAEVVLGDGSRGWPAKAPYDVICVSGGLPVVPQEL
LEQLKVGGRLAAFVGGRPVMKAQIITRIDDTQYRVADVFETYVDHLVNAIEPSRFKF

Specific function: Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins [H]

COG id: COG2518

COG function: function code O; Protein-L-isoaspartate carboxylmethyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. L- isoaspartyl/D-aspartyl protein methyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI226530908, Length=140, Percent_Identity=33.5714285714286, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1789100, Length=169, Percent_Identity=37.2781065088757, Blast_Score=105, Evalue=2e-24,
Organism=Drosophila melanogaster, GI17981723, Length=193, Percent_Identity=27.4611398963731, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000682 [H]

Pfam domain/function: PF01135 PCMT [H]

EC number: =2.1.1.77 [H]

Molecular weight: Translated: 24075; Mature: 24075

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS01279 PCMT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEKARFNMIEQQIRPWDVLDQDVLSLLSVVKRENFVPAAYRDLAFADVELPLPSGQKM
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCCCCCC
LFPRVEARILQELAVKKHENVLEIGAGCGYMAALLAARGQRVTTVEIDPDLAKFAEENLK
HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHH
KNGVTNAEVVLGDGSRGWPAKAPYDVICVSGGLPVVPQELLEQLKVGGRLAAFVGGRPVM
HCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCHH
KAQIITRIDDTQYRVADVFETYVDHLVNAIEPSRFKF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNIEKARFNMIEQQIRPWDVLDQDVLSLLSVVKRENFVPAAYRDLAFADVELPLPSGQKM
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCCCCCC
LFPRVEARILQELAVKKHENVLEIGAGCGYMAALLAARGQRVTTVEIDPDLAKFAEENLK
HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHH
KNGVTNAEVVLGDGSRGWPAKAPYDVICVSGGLPVVPQELLEQLKVGGRLAAFVGGRPVM
HCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCHH
KAQIITRIDDTQYRVADVFETYVDHLVNAIEPSRFKF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA