| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813315
Identifier: 237813315
GI number: 237813315
Start: 2997008
End: 2997673
Strand: Reverse
Name: 237813315
Synonym: GBP346_A3084
Alternate gene names: NA
Gene position: 2997673-2997008 (Counterclockwise)
Preceding gene: 237813316
Following gene: 237813314
Centisome position: 73.14
GC content: 57.96
Gene sequence:
>666_bases GTGGCGTGGCGGCTATGGTTTCAGGTTGCGCTGTCCGTGACGAACAGAGACGAGAAGGGCCAGCGTGAAGCAGTGGCGCG ACAGCGAGAGAATGTGTCGCAGCTCGTTCGCGTGCTTGGCGACGCGCGTGAATTGCTTAACGATATCGCGCGGGAACAGG CGCACGCGCCCATTTCGGTGCCACTGGAGTTCACGGATATCCTGCATCTGATCGAGGCAACCGCCGCACATCCGGGGATC GTCGAGCCGTATGATCGTGCGCGGTATGAAGAAAATGCACGTCCTCGCCTTGACGAAATACTCAGTTTCAACGGCAGTTC GGCTTGTTTCATTCCGTCGGTGGTTCAGGTGTTGACCGGGTTGGAGAGCATCGCATTCGGTTTGGAAGCGGCGCTAGAGA GCCGCCAGACTATCCCGTGGCGTGGGAGCTTCGTGGCCGATCAGCTTACGTCACAAAAATCGAGCGAGATTCGCGCCTAC GTCCGAACCGTTGACCGCGCTATGTGGGAAATTCGATGGGAATTCACGAACTCCGATGGTGCGGAATGCTGGCGGCTTCC CGACTCGCTGGTTGCGCTCCAGTGCAAAGTGGCTTTGGGCCTGAACGACCTTGAGGGCTTCGTTGATCGCGTGCGAAAAA GTCGAATGAAGCCGGAAGATTTCTAG
Upstream 100 bases:
>100_bases AAGAGAGGTCGAGGCGGCGAGGCGACTTGCAGCAGATCCCCGGATGGAAGTTTTTTACGGCTCCGCGTCCCTTAAGTGGG CGTGCGGGCTGAATGCCGAC
Downstream 100 bases:
>100_bases CCACCGGCGAGTCGAAATGTTCCGTGTTCTGATTTTTCGCGCTTAATTACGATGCTCCCGCTTCTGCGCCAATGGTGGCG TAGATTTGCTTAGGGAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MAWRLWFQVALSVTNRDEKGQREAVARQRENVSQLVRVLGDARELLNDIAREQAHAPISVPLEFTDILHLIEATAAHPGI VEPYDRARYEENARPRLDEILSFNGSSACFIPSVVQVLTGLESIAFGLEAALESRQTIPWRGSFVADQLTSQKSSEIRAY VRTVDRAMWEIRWEFTNSDGAECWRLPDSLVALQCKVALGLNDLEGFVDRVRKSRMKPEDF
Sequences:
>Translated_221_residues MAWRLWFQVALSVTNRDEKGQREAVARQRENVSQLVRVLGDARELLNDIAREQAHAPISVPLEFTDILHLIEATAAHPGI VEPYDRARYEENARPRLDEILSFNGSSACFIPSVVQVLTGLESIAFGLEAALESRQTIPWRGSFVADQLTSQKSSEIRAY VRTVDRAMWEIRWEFTNSDGAECWRLPDSLVALQCKVALGLNDLEGFVDRVRKSRMKPEDF >Mature_220_residues AWRLWFQVALSVTNRDEKGQREAVARQRENVSQLVRVLGDARELLNDIAREQAHAPISVPLEFTDILHLIEATAAHPGIV EPYDRARYEENARPRLDEILSFNGSSACFIPSVVQVLTGLESIAFGLEAALESRQTIPWRGSFVADQLTSQKSSEIRAYV RTVDRAMWEIRWEFTNSDGAECWRLPDSLVALQCKVALGLNDLEGFVDRVRKSRMKPEDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25100; Mature: 24968
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWRLWFQVALSVTNRDEKGQREAVARQRENVSQLVRVLGDARELLNDIAREQAHAPISV CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PLEFTDILHLIEATAAHPGIVEPYDRARYEENARPRLDEILSFNGSSACFIPSVVQVLTG CHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH LESIAFGLEAALESRQTIPWRGSFVADQLTSQKSSEIRAYVRTVDRAMWEIRWEFTNSDG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC AECWRLPDSLVALQCKVALGLNDLEGFVDRVRKSRMKPEDF CHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AWRLWFQVALSVTNRDEKGQREAVARQRENVSQLVRVLGDARELLNDIAREQAHAPISV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PLEFTDILHLIEATAAHPGIVEPYDRARYEENARPRLDEILSFNGSSACFIPSVVQVLTG CHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH LESIAFGLEAALESRQTIPWRGSFVADQLTSQKSSEIRAYVRTVDRAMWEIRWEFTNSDG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC AECWRLPDSLVALQCKVALGLNDLEGFVDRVRKSRMKPEDF CHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA