Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237813316

Identifier: 237813316

GI number: 237813316

Start: 2998211

End: 2999785

Strand: Reverse

Name: 237813316

Synonym: GBP346_A3085

Alternate gene names: NA

Gene position: 2999785-2998211 (Counterclockwise)

Preceding gene: 237813319

Following gene: 237813315

Centisome position: 73.19

GC content: 51.56

Gene sequence:

>1575_bases
ATGGAAACACTAACGATACGCGAGATACTTGATGCGGTTTACCGTGGGCAAATTCGAATCCCAGCCTTTCAGCGGGGCTT
TGTCTGGGAGCCTGATCGCGTCGCCTTTTTGATCGATAGTATTTATAAGGGCTATCCGTTTGGCGCGTTACTCTTCTGGC
GGACGAGTGAGAGACTCCAGACGGAGAACAAATTAGGACCGTTTGACCTGCCGGCTCCGCAGGCTGATTTTCCCATCGAT
TACGTTCTTGATGGACAGCAACGCGTCACTTCGATATTTGGCGTATTCCAAACTGAGCTTCAGGGCGATTCCCCTACCTG
GAAGGATATTTACTTCGATTTTCAGCAAATTGTCGATGTCCAAGAGACGCAGTTCTTTGCATTAGCTTCTGACGAAGTTG
ATCCGAATCGGCACTTTCCGCTGCGAGCGATTTTCGACACTACAGAGTATCGTCGGCTCACGCGTTCCATGACCGACGAA
CTGGCGCTTCAGATCGATCGCATGCAAACCATCTTCCGGGAGGCTCGCGTACCTGTTCAGACCTTTAGGACCGACGAGAA
GGAAAAGGTCGCGATTATCTTTGAGCGGATTAATCGGCAGGGCGTACCCCTCGATACGCTCCAGTTGCTGTCTGCTTGGA
CGTGGAGCGAGGATTTTCAACTCAAATCAGAGTTTGAAGACTTGATCGAGGAACTAGGTGACTACGGTTTCACTGAACTC
TCCAACGACATTAGCTTATTGCTTCGCTGCACGGCGGCCATCCTCACTGGTTCGTCACGTCCTGAAAGCCTAGTGCAACT
CAACGGTTCCGTGGTTCGCCAACGGTTCAGCGAAGTTGTCAACGGCATTCGAGGCGCGCTTGACTTCTTGGCGACTGAGT
ATGACCTGCCTTCGATCGAAAATTTGCCCTACGAGAACTGTCTGATTCCGTTGTCGGTCTTCTTTGCTGCGCCTGGAAAT
TCAGAAGTGGCGGTGAGCGATATACAGCGAATTACCCTATCTCGATGGTTCTGGAGAGCAGCGTTTTCAGGTCGCTACAG
TGCTGGAGTTTTACGGCACCTAGATGCTGATATTAGCGAAGCGATAAAGTTGAAGCAGGGACAGCCATCTCAACTAGCGA
ACATCCTCGTCAATGTAACGGCAGATCACTTCCTTGAAAATCGGTTTGTGATCGGAACTGTGAACACGAAGACGTTCATT
GCTCTTCTTGCCCAAATGGCGCCTCTGAACTTTGTTAGCGGAACTCCGGTAGATCTTCGGCAGAAGCTTCAAAGTTATAA
CCGAAAGGAATTTCACCACCTGATGCCCAAGGCTTTTCTCACGGCGTCGGGACAAGCACAACGCAGCGAAAACATTCTGG
CGAATTTTTGCTTCATCGCCCGCAGTGACAATCGTGTACTTGGCGGCGACTCTCCGAGCGCGTACCGGGGGAAGATGGCT
GCGAACGTCGACGATATTCTCCAGTCCCATCTGTGTCCAAACGCACTGTTCGACGATAACTACGAGGCCTTTGTAACACT
CCGCGCCGCGAGCCTCGCTGCCAAGGCTCGGGAGCTTTGTGGTGCCGACGATTAG

Upstream 100 bases:

>100_bases
AGGATAATATGACGTCGAACTGGCTGCGATGGATGGCTACCGCCAATCGTTTTGCCTAGGCATTTAGCCTATAAACTACC
TAAATTCCTTACTATTTGTC

Downstream 100 bases:

>100_bases
CGTTTCTCGCACGCTTTGGGTTATCTGGTACCACTGATGGTCATCAAAAGCGGCCGGTAACTGATCGAAGCTGACACCCG
AACGTCTGATTGACGCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
METLTIREILDAVYRGQIRIPAFQRGFVWEPDRVAFLIDSIYKGYPFGALLFWRTSERLQTENKLGPFDLPAPQADFPID
YVLDGQQRVTSIFGVFQTELQGDSPTWKDIYFDFQQIVDVQETQFFALASDEVDPNRHFPLRAIFDTTEYRRLTRSMTDE
LALQIDRMQTIFREARVPVQTFRTDEKEKVAIIFERINRQGVPLDTLQLLSAWTWSEDFQLKSEFEDLIEELGDYGFTEL
SNDISLLLRCTAAILTGSSRPESLVQLNGSVVRQRFSEVVNGIRGALDFLATEYDLPSIENLPYENCLIPLSVFFAAPGN
SEVAVSDIQRITLSRWFWRAAFSGRYSAGVLRHLDADISEAIKLKQGQPSQLANILVNVTADHFLENRFVIGTVNTKTFI
ALLAQMAPLNFVSGTPVDLRQKLQSYNRKEFHHLMPKAFLTASGQAQRSENILANFCFIARSDNRVLGGDSPSAYRGKMA
ANVDDILQSHLCPNALFDDNYEAFVTLRAASLAAKARELCGADD

Sequences:

>Translated_524_residues
METLTIREILDAVYRGQIRIPAFQRGFVWEPDRVAFLIDSIYKGYPFGALLFWRTSERLQTENKLGPFDLPAPQADFPID
YVLDGQQRVTSIFGVFQTELQGDSPTWKDIYFDFQQIVDVQETQFFALASDEVDPNRHFPLRAIFDTTEYRRLTRSMTDE
LALQIDRMQTIFREARVPVQTFRTDEKEKVAIIFERINRQGVPLDTLQLLSAWTWSEDFQLKSEFEDLIEELGDYGFTEL
SNDISLLLRCTAAILTGSSRPESLVQLNGSVVRQRFSEVVNGIRGALDFLATEYDLPSIENLPYENCLIPLSVFFAAPGN
SEVAVSDIQRITLSRWFWRAAFSGRYSAGVLRHLDADISEAIKLKQGQPSQLANILVNVTADHFLENRFVIGTVNTKTFI
ALLAQMAPLNFVSGTPVDLRQKLQSYNRKEFHHLMPKAFLTASGQAQRSENILANFCFIARSDNRVLGGDSPSAYRGKMA
ANVDDILQSHLCPNALFDDNYEAFVTLRAASLAAKARELCGADD
>Mature_524_residues
METLTIREILDAVYRGQIRIPAFQRGFVWEPDRVAFLIDSIYKGYPFGALLFWRTSERLQTENKLGPFDLPAPQADFPID
YVLDGQQRVTSIFGVFQTELQGDSPTWKDIYFDFQQIVDVQETQFFALASDEVDPNRHFPLRAIFDTTEYRRLTRSMTDE
LALQIDRMQTIFREARVPVQTFRTDEKEKVAIIFERINRQGVPLDTLQLLSAWTWSEDFQLKSEFEDLIEELGDYGFTEL
SNDISLLLRCTAAILTGSSRPESLVQLNGSVVRQRFSEVVNGIRGALDFLATEYDLPSIENLPYENCLIPLSVFFAAPGN
SEVAVSDIQRITLSRWFWRAAFSGRYSAGVLRHLDADISEAIKLKQGQPSQLANILVNVTADHFLENRFVIGTVNTKTFI
ALLAQMAPLNFVSGTPVDLRQKLQSYNRKEFHHLMPKAFLTASGQAQRSENILANFCFIARSDNRVLGGDSPSAYRGKMA
ANVDDILQSHLCPNALFDDNYEAFVTLRAASLAAKARELCGADD

Specific function: Unknown

COG id: COG3472

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018651
- InterPro:   IPR004919 [H]

Pfam domain/function: PF09854 DUF2081; PF03235 DUF262 [H]

EC number: NA

Molecular weight: Translated: 59398; Mature: 59398

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLTIREILDAVYRGQIRIPAFQRGFVWEPDRVAFLIDSIYKGYPFGALLFWRTSERLQ
CCCCCHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHH
TENKLGPFDLPAPQADFPIDYVLDGQQRVTSIFGVFQTELQGDSPTWKDIYFDFQQIVDV
HCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCH
QETQFFALASDEVDPNRHFPLRAIFDTTEYRRLTRSMTDELALQIDRMQTIFREARVPVQ
HHCEEEEEECCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TFRTDEKEKVAIIFERINRQGVPLDTLQLLSAWTWSEDFQLKSEFEDLIEELGDYGFTEL
HHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH
SNDISLLLRCTAAILTGSSRPESLVQLNGSVVRQRFSEVVNGIRGALDFLATEYDLPSIE
HHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NLPYENCLIPLSVFFAAPGNSEVAVSDIQRITLSRWFWRAAFSGRYSAGVLRHLDADISE
CCCCCCCEEEEHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
AIKLKQGQPSQLANILVNVTADHFLENRFVIGTVNTKTFIALLAQMAPLNFVSGTPVDLR
HHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHH
QKLQSYNRKEFHHLMPKAFLTASGQAQRSENILANFCFIARSDNRVLGGDSPSAYRGKMA
HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCCEEECCCCCCHHCCCCC
ANVDDILQSHLCPNALFDDNYEAFVTLRAASLAAKARELCGADD
CCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
METLTIREILDAVYRGQIRIPAFQRGFVWEPDRVAFLIDSIYKGYPFGALLFWRTSERLQ
CCCCCHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHH
TENKLGPFDLPAPQADFPIDYVLDGQQRVTSIFGVFQTELQGDSPTWKDIYFDFQQIVDV
HCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCH
QETQFFALASDEVDPNRHFPLRAIFDTTEYRRLTRSMTDELALQIDRMQTIFREARVPVQ
HHCEEEEEECCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TFRTDEKEKVAIIFERINRQGVPLDTLQLLSAWTWSEDFQLKSEFEDLIEELGDYGFTEL
HHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH
SNDISLLLRCTAAILTGSSRPESLVQLNGSVVRQRFSEVVNGIRGALDFLATEYDLPSIE
HHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NLPYENCLIPLSVFFAAPGNSEVAVSDIQRITLSRWFWRAAFSGRYSAGVLRHLDADISE
CCCCCCCEEEEHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
AIKLKQGQPSQLANILVNVTADHFLENRFVIGTVNTKTFIALLAQMAPLNFVSGTPVDLR
HHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHH
QKLQSYNRKEFHHLMPKAFLTASGQAQRSENILANFCFIARSDNRVLGGDSPSAYRGKMA
HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCCEEECCCCCCHHCCCCC
ANVDDILQSHLCPNALFDDNYEAFVTLRAASLAAKARELCGADD
CCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]