| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813314
Identifier: 237813314
GI number: 237813314
Start: 2996642
End: 2996905
Strand: Reverse
Name: 237813314
Synonym: GBP346_A3083
Alternate gene names: NA
Gene position: 2996905-2996642 (Counterclockwise)
Preceding gene: 237813315
Following gene: 237813313
Centisome position: 73.12
GC content: 61.74
Gene sequence:
>264_bases ATGTCCGCAAAGACTCAATTCGCATTTCAGGCTCCGGCCGGATTGCCGCTCGATGGCTTTTCGCGCTGGGGGGATCTCCG TGCCTTCATTCCTCTGTCCCGCGAAACCGTCCGCCAGCGCGAGCTGGAAGGCCGGTTTCCCCGCGCTCGTCGTCTGACGC AGCGCTGCACCATTTGGCCGAATCGCGAAATCCATCGCTGGATCGCTGACCCGTTGAATTATCGTGCCGACGGCGCAGCG ATCGAGATGAAGGAGGGCGCGTAA
Upstream 100 bases:
>100_bases ACCGGCGAGTCGAAATGTTCCGTGTTCTGATTTTTCGCGCTTAATTACGATGCTCCCGCTTCTGCGCCAATGGTGGCGTA GATTTGCTTAGGGAGCACAA
Downstream 100 bases:
>100_bases TGGCGAACCTGACGAAGGCGTGCGAATGCTCGGCAGCGCGTGCGGCCAAGAAGCAAGCGGACGCAGAATTTTACGAAAGC GAGTTGGAGCGCCACCGCGA
Product: phage transcriptional regulator, AlpA
Products: NA
Alternate protein names: Prophage CP4-57 Regulatory Protein; Phage Transcriptional Regulator; Conserved Domain Protein; Prophage CP4-57 Regulatory
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSAKTQFAFQAPAGLPLDGFSRWGDLRAFIPLSRETVRQRELEGRFPRARRLTQRCTIWPNREIHRWIADPLNYRADGAA IEMKEGA
Sequences:
>Translated_87_residues MSAKTQFAFQAPAGLPLDGFSRWGDLRAFIPLSRETVRQRELEGRFPRARRLTQRCTIWPNREIHRWIADPLNYRADGAA IEMKEGA >Mature_86_residues SAKTQFAFQAPAGLPLDGFSRWGDLRAFIPLSRETVRQRELEGRFPRARRLTQRCTIWPNREIHRWIADPLNYRADGAAI EMKEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10071; Mature: 9939
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKTQFAFQAPAGLPLDGFSRWGDLRAFIPLSRETVRQRELEGRFPRARRLTQRCTIWP CCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCCCC NREIHRWIADPLNYRADGAAIEMKEGA CHHHHHHHHCCCCCCCCCCEEEECCCC >Mature Secondary Structure SAKTQFAFQAPAGLPLDGFSRWGDLRAFIPLSRETVRQRELEGRFPRARRLTQRCTIWP CCCCCEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCCCC NREIHRWIADPLNYRADGAAIEMKEGA CHHHHHHHHCCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA