| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813101
Identifier: 237813101
GI number: 237813101
Start: 2797823
End: 2798302
Strand: Direct
Name: 237813101
Synonym: GBP346_A2863
Alternate gene names: NA
Gene position: 2797823-2798302 (Clockwise)
Preceding gene: 237813100
Following gene: 237813102
Centisome position: 68.26
GC content: 74.38
Gene sequence:
>480_bases ATGCCGCGGCTCGGCGGCGCGCATCGCGTCCGCCGCGTGCGCGCTTGCCATACGCGGCGGTCGGCCGCCACCGATCCGAT CCCGCAGCGCGGAGCTTCAATCCAAGAACGCTCGACCAGCGCGACGCCTTTGCGCGCCGCATCGTGGCGCGCGCAACGCA CTCACGCCTCGCACCGCCTGGCTCGGCCCCACGGGCCGTGCACTCATCACGTTCCGGCGCGAGGCTCGTCGCCGCTGCGA TCGCCGGTCGTTCAACACGGCTTCGCCCGTCGCCGGCGATGGCCGGCACACCATCGCCCCACGCTGCGATGCTCGCGGGC TGCGCGCCGTCGCGATCGTCGCGCCCTCGCCCGCTTCCCGTCGCTCGCCGGCATCGCGCATTCGCGGCCGCGCAGCGCAT CCTGCCATCCGCGCGAGCGCCGCGCGTTCGATCCGCGCAACCGGGGTTCGATGCCGCAGCCCGAATGCGCGCCGCCTTAA
Upstream 100 bases:
>100_bases ACGGCCGCGCTGCTCGTCTATGTCGTGCGCTATGCCGGGCTTCTGATGTCGCCGGCGCCCAGCGCGCCCGGCCCGGACGC GCGCTCCGGCGGATAGCCCG
Downstream 100 bases:
>100_bases TCACGGTCAAGTACGCGTCAAACTTCGCCGGATCGCCGTTGACCCATACAACATCTGGTATTTAGCATTCACCCCGTCAC CAGATTTTGTGCCACCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPRLGGAHRVRRVRACHTRRSAATDPIPQRGASIQERSTSATPLRAASWRAQRTHASHRLARPHGPCTHHVPARGSSPLR SPVVQHGFARRRRWPAHHRPTLRCSRAARRRDRRALARFPSLAGIAHSRPRSASCHPRERRAFDPRNRGSMPQPECAPP
Sequences:
>Translated_159_residues MPRLGGAHRVRRVRACHTRRSAATDPIPQRGASIQERSTSATPLRAASWRAQRTHASHRLARPHGPCTHHVPARGSSPLR SPVVQHGFARRRRWPAHHRPTLRCSRAARRRDRRALARFPSLAGIAHSRPRSASCHPRERRAFDPRNRGSMPQPECAPP >Mature_158_residues PRLGGAHRVRRVRACHTRRSAATDPIPQRGASIQERSTSATPLRAASWRAQRTHASHRLARPHGPCTHHVPARGSSPLRS PVVQHGFARRRRWPAHHRPTLRCSRAARRRDRRALARFPSLAGIAHSRPRSASCHPRERRAFDPRNRGSMPQPECAPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17944; Mature: 17813
Theoretical pI: Translated: 12.80; Mature: 12.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLGGAHRVRRVRACHTRRSAATDPIPQRGASIQERSTSATPLRAASWRAQRTHASHRL CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH ARPHGPCTHHVPARGSSPLRSPVVQHGFARRRRWPAHHRPTLRCSRAARRRDRRALARFP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC SLAGIAHSRPRSASCHPRERRAFDPRNRGSMPQPECAPP HHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRLGGAHRVRRVRACHTRRSAATDPIPQRGASIQERSTSATPLRAASWRAQRTHASHRL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH ARPHGPCTHHVPARGSSPLRSPVVQHGFARRRRWPAHHRPTLRCSRAARRRDRRALARFP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC SLAGIAHSRPRSASCHPRERRAFDPRNRGSMPQPECAPP HHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA