| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813100
Identifier: 237813100
GI number: 237813100
Start: 2796490
End: 2797818
Strand: Direct
Name: 237813100
Synonym: GBP346_A2862
Alternate gene names: NA
Gene position: 2796490-2797818 (Clockwise)
Preceding gene: 237813099
Following gene: 237813101
Centisome position: 68.23
GC content: 72.16
Gene sequence:
>1329_bases TTGCGCGCGGACAACACCGCGGCCGCGCAATCTTGTCGCAGCGCACGCGCGCGCTTCTTCTCCTATCATGCATCAAGAAA GCAACATATCGAAAAGGGGAACGTCATGCCGCTCGTCCGCTCGACGAACCACAGCCCGCTCGCGCCGCCCGACGGCCGCC ATGCCGCGCTATGGTCGACCGGCTTCCGGTCCTTCTATCTCGGCGGCGCCGGCTTCGGCGCGATCGCGATGCTCGCGTGG CTCGGCGCGCTCGCGGGCCACGATTCGGCCGGACGCGCGGCCCCCGCGAGCGGCCTGTTCTGGCACGCGCACGAAATGGT GTTCGGCTTCGGCGGCGCGATCGTGTCCGGCTTCCTGCTGACGTCGCTGCGCACCTGGACGTCGACGAATCCCGCGCAAG GCCCGTCGCTCGCCGCGCTGTGGCTGCTGTGGTTGGCCGGCCGCGTGCTGATGTGGACCGGGCCCGGCTGGGCCGCGGCC GCGGTCGACATCGCATTGCTGCCGGCGATCGCCTATGCGCTCGTTCGCGCGCTGATCGGCGCGAAAAATCGGCACGGCAT CTTCCTGCCCGTCGCGCTCGGCATGCTCGCCGCGCTCAACGCGCTCTTTCACCTGTGGATCCGGCAAGGCCACGCCGACT GGGCGCTGCGCTGCGTCGACCTCGCCGCCGGACTGCTCGTGCTCTTCATCGTCATCATCGGCGGGCGCATCATCCCGTCG ATCACGGCTACCGCGCGGCCCGAGTTGCCCGTCAGGCAGTGGCGGCTCGTCGAATCGTCGGTGATGTCGGTGACGCTCGC CGCGCTGCTCGCCGACGCGACGGGCGCGCCCGCGCCCGCGATCGCCGCGCTCGCGGCGGCCGCCGCCGCGCTGCATGCCG CGCGGCTCGTCGGCTGGCGCTTCTGGGCGGTTGGGCGGCGGCCGATGCTGTCGATCCTGCACGTCGCCTACGCATCGATC GCCGCCGGCTTCGCGCTGACGGCCCTGAGCGCATACGGGTTCGTCGCGCACTCGCTCGCGCTGCACACGTTCACGACGGG CGCGATCGGCTGCGCGATCGTCGGGATGATCACGCGCACCGCGCTCGAGCACACGGGGCGAGAACCCGTCGCGAAGCTCG CCGAACGCATTTGCTACGGGCTGCTGATCGTCGCGACGCTCGCGCGCGTCGCGGGGCCCGCGCTCGCGCCCGCCGCGACC GCGCAATGGCTTGCCGTCGCGGGCGTCGGCTGGACGGCCGCGCTGCTCGTCTATGTCGTGCGCTATGCCGGGCTTCTGAT GTCGCCGGCGCCCAGCGCGCCCGGCCCGGACGCGCGCTCCGGCGGATAG
Upstream 100 bases:
>100_bases GGCATCGCGCTCGCGCGCCGTTCGGCGTCGCACCGCGGCGCCGGCAAGCGCGCCGCTTAGTCCGTCGCGTCCGCCGCGTC AACGCGCGGACGCGCGCGCC
Downstream 100 bases:
>100_bases CCCGATGCCGCGGCTCGGCGGCGCGCATCGCGTCCGCCGCGTGCGCGCTTGCCATACGCGGCGGTCGGCCGCCACCGATC CGATCCCGCAGCGCGGAGCT
Product: heme/copper membrane protein
Products: NA
Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; NnrS Transmembrane Protein; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; Heme-Cu Protein NnrS; NnrS-Like Protein; Asparagine Synthetase B; Nnrs Family Protein; NnrS Protein Superfamily
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MRADNTAAAQSCRSARARFFSYHASRKQHIEKGNVMPLVRSTNHSPLAPPDGRHAALWSTGFRSFYLGGAGFGAIAMLAW LGALAGHDSAGRAAPASGLFWHAHEMVFGFGGAIVSGFLLTSLRTWTSTNPAQGPSLAALWLLWLAGRVLMWTGPGWAAA AVDIALLPAIAYALVRALIGAKNRHGIFLPVALGMLAALNALFHLWIRQGHADWALRCVDLAAGLLVLFIVIIGGRIIPS ITATARPELPVRQWRLVESSVMSVTLAALLADATGAPAPAIAALAAAAAALHAARLVGWRFWAVGRRPMLSILHVAYASI AAGFALTALSAYGFVAHSLALHTFTTGAIGCAIVGMITRTALEHTGREPVAKLAERICYGLLIVATLARVAGPALAPAAT AQWLAVAGVGWTAALLVYVVRYAGLLMSPAPSAPGPDARSGG
Sequences:
>Translated_442_residues MRADNTAAAQSCRSARARFFSYHASRKQHIEKGNVMPLVRSTNHSPLAPPDGRHAALWSTGFRSFYLGGAGFGAIAMLAW LGALAGHDSAGRAAPASGLFWHAHEMVFGFGGAIVSGFLLTSLRTWTSTNPAQGPSLAALWLLWLAGRVLMWTGPGWAAA AVDIALLPAIAYALVRALIGAKNRHGIFLPVALGMLAALNALFHLWIRQGHADWALRCVDLAAGLLVLFIVIIGGRIIPS ITATARPELPVRQWRLVESSVMSVTLAALLADATGAPAPAIAALAAAAAALHAARLVGWRFWAVGRRPMLSILHVAYASI AAGFALTALSAYGFVAHSLALHTFTTGAIGCAIVGMITRTALEHTGREPVAKLAERICYGLLIVATLARVAGPALAPAAT AQWLAVAGVGWTAALLVYVVRYAGLLMSPAPSAPGPDARSGG >Mature_442_residues MRADNTAAAQSCRSARARFFSYHASRKQHIEKGNVMPLVRSTNHSPLAPPDGRHAALWSTGFRSFYLGGAGFGAIAMLAW LGALAGHDSAGRAAPASGLFWHAHEMVFGFGGAIVSGFLLTSLRTWTSTNPAQGPSLAALWLLWLAGRVLMWTGPGWAAA AVDIALLPAIAYALVRALIGAKNRHGIFLPVALGMLAALNALFHLWIRQGHADWALRCVDLAAGLLVLFIVIIGGRIIPS ITATARPELPVRQWRLVESSVMSVTLAALLADATGAPAPAIAALAAAAAALHAARLVGWRFWAVGRRPMLSILHVAYASI AAGFALTALSAYGFVAHSLALHTFTTGAIGCAIVGMITRTALEHTGREPVAKLAERICYGLLIVATLARVAGPALAPAAT AQWLAVAGVGWTAALLVYVVRYAGLLMSPAPSAPGPDARSGG
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46058; Mature: 46058
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRADNTAAAQSCRSARARFFSYHASRKQHIEKGNVMPLVRSTNHSPLAPPDGRHAALWST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEHHHHH GFRSFYLGGAGFGAIAMLAWLGALAGHDSAGRAAPASGLFWHAHEMVFGFGGAIVSGFLL CCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TSLRTWTSTNPAQGPSLAALWLLWLAGRVLMWTGPGWAAAAVDIALLPAIAYALVRALIG HHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC AKNRHGIFLPVALGMLAALNALFHLWIRQGHADWALRCVDLAAGLLVLFIVIIGGRIIPS CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCC ITATARPELPVRQWRLVESSVMSVTLAALLADATGAPAPAIAALAAAAAALHAARLVGWR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FWAVGRRPMLSILHVAYASIAAGFALTALSAYGFVAHSLALHTFTTGAIGCAIVGMITRT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALEHTGREPVAKLAERICYGLLIVATLARVAGPALAPAATAQWLAVAGVGWTAALLVYVV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH RYAGLLMSPAPSAPGPDARSGG HHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRADNTAAAQSCRSARARFFSYHASRKQHIEKGNVMPLVRSTNHSPLAPPDGRHAALWST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEHHHHH GFRSFYLGGAGFGAIAMLAWLGALAGHDSAGRAAPASGLFWHAHEMVFGFGGAIVSGFLL CCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TSLRTWTSTNPAQGPSLAALWLLWLAGRVLMWTGPGWAAAAVDIALLPAIAYALVRALIG HHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC AKNRHGIFLPVALGMLAALNALFHLWIRQGHADWALRCVDLAAGLLVLFIVIIGGRIIPS CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCC ITATARPELPVRQWRLVESSVMSVTLAALLADATGAPAPAIAALAAAAAALHAARLVGWR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FWAVGRRPMLSILHVAYASIAAGFALTALSAYGFVAHSLALHTFTTGAIGCAIVGMITRT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALEHTGREPVAKLAERICYGLLIVATLARVAGPALAPAATAQWLAVAGVGWTAALLVYVV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH RYAGLLMSPAPSAPGPDARSGG HHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA