| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is puuA [H]
Identifier: 237813073
GI number: 237813073
Start: 2771186
End: 2772520
Strand: Reverse
Name: puuA [H]
Synonym: GBP346_A2835
Alternate gene names: 237813073
Gene position: 2772520-2771186 (Counterclockwise)
Preceding gene: 237813074
Following gene: 237813072
Centisome position: 67.65
GC content: 64.34
Gene sequence:
>1335_bases ATGCAAGACATCGATGATTTTTTGAGGCAGCACCGGATCACCGAAGTGGAAGCGATCATTCCCGACATGGCGGGCATCGC GCGCGGCAAGATCATTCCGCGCAACAAGTTCGAAACCGGCGAATCGATGCGCCTGCCGCAAGCGGTGATGGTGCAGACCG TCACCGGCGATTATCCGGAGGACGGCACGCTCACGGGCGTCACGGATCCCGACATGGTGTGCGTGGCCGACGCGTCGACG ATCTGCCTGATTCCGTGGGCAGTCGACCCCACCGCGCAGGTGATTCACGATTGCGTGCATTTCGACGGCTCGCCCGTCGA AATCTCGCCGCGCTACGTGCTGCGCCGCGTGCTCGACCTGTATCGCGCGAGGGGGTGGAAGCCCGTCGTCGCGCCGGAGC TCGAGTTCTATCTGGTCGACATGAACAAGGACCCGGACCTGCCGCTGCGGCCGCCCGTCGGACGCACGGGGCGCGCGGAA ACGGGGCGGCAGTCGTACTCGATCGAAGCGGTCAACGAATTCGATCCGCTCTTCGAGGACATCTACGAGTACTGCGAGCT GCAGGGCCTCGACATCGACACGCTGATTCACGAAGTCGGCGCCGCGCAGATGGAGATCAACTTCCTGCACGGCGATGCGC TATCGCTCGCCGACCAGGTGTTTCTGTTCAAGCGCACGGTGCGCGAGGCGGCGCTGCGCCACAACATGTACGCCACCTTC ATGGCAAAGCCGATGGAGAGCGAGCCCGGCTCGGCGATGCACATTCATCAGAGCGTCGTCGACATCGAGACCGGGCGCAA TCTCTTCATCGGCGCGAGCGGCGACGTGACGCCGATGTTCCGCAGCTATCTCGCCGGGCTGCAGAAGTACACGCCCGCGC TGATGCCGATCTTCGCGCCGTACATCAACTCGTACCGGCGGCTGTCGCGCTTCATGGCCGCGCCGATCAACGTGCAATGG GGCTACGACAACCGCACGGTCGGCTTCCGGATTCCGCACTCGGCCGCCGCCGCGCGGCGGATCGAGAACCGGATTCCGGG CGTCGACTGCAACCCGTATCTCGCGATCGCGGGCACGCTCGCGGCGGGCTACCTCGGCGTCACGCAGGGGCTCGAGCCGA CCGAGCCGCTCGCGAGCGACGGCTACAGCCTGCCGTATCAACTGCCGCGCAATCTGGAGGAAGGGCTCACGCTGATGAGC GCATGCGCGCCGCTTGCCGAGATGCTCGGCGAGAAATTCGTGAAAGCCTATCTCGCATTGAAGGAAACGGAGTACGAAGC ATTTTTCCGCGTGATCAGCTCGTGGGAGCGCAGGCACCTGCTGCTGCACGTTTGA
Upstream 100 bases:
>100_bases TTGCGGCGTTCGGCGCGGCGTGCCGCGCGCGAAGACGCGCGACGGCCGGGCGCGCGCCGCGCGCGTGACGGCCGTCGACG CTTATCGAAGAGAGGCTCAC
Downstream 100 bases:
>100_bases GCGTGCGCACGCACGCCGCATTCAGGAGATCCAAGTGACGTATCGAACCGAAGACATCGCCTATGTAGCGCCGCTGCACG CGAGCGCCGCGCCCGCGCAC
Product: glutamine synthetase family protein
Products: NA
Alternate protein names: Gamma-Glu-Put synthetase; Glutamate--putrescine ligase [H]
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MQDIDDFLRQHRITEVEAIIPDMAGIARGKIIPRNKFETGESMRLPQAVMVQTVTGDYPEDGTLTGVTDPDMVCVADAST ICLIPWAVDPTAQVIHDCVHFDGSPVEISPRYVLRRVLDLYRARGWKPVVAPELEFYLVDMNKDPDLPLRPPVGRTGRAE TGRQSYSIEAVNEFDPLFEDIYEYCELQGLDIDTLIHEVGAAQMEINFLHGDALSLADQVFLFKRTVREAALRHNMYATF MAKPMESEPGSAMHIHQSVVDIETGRNLFIGASGDVTPMFRSYLAGLQKYTPALMPIFAPYINSYRRLSRFMAAPINVQW GYDNRTVGFRIPHSAAAARRIENRIPGVDCNPYLAIAGTLAAGYLGVTQGLEPTEPLASDGYSLPYQLPRNLEEGLTLMS ACAPLAEMLGEKFVKAYLALKETEYEAFFRVISSWERRHLLLHV
Sequences:
>Translated_444_residues MQDIDDFLRQHRITEVEAIIPDMAGIARGKIIPRNKFETGESMRLPQAVMVQTVTGDYPEDGTLTGVTDPDMVCVADAST ICLIPWAVDPTAQVIHDCVHFDGSPVEISPRYVLRRVLDLYRARGWKPVVAPELEFYLVDMNKDPDLPLRPPVGRTGRAE TGRQSYSIEAVNEFDPLFEDIYEYCELQGLDIDTLIHEVGAAQMEINFLHGDALSLADQVFLFKRTVREAALRHNMYATF MAKPMESEPGSAMHIHQSVVDIETGRNLFIGASGDVTPMFRSYLAGLQKYTPALMPIFAPYINSYRRLSRFMAAPINVQW GYDNRTVGFRIPHSAAAARRIENRIPGVDCNPYLAIAGTLAAGYLGVTQGLEPTEPLASDGYSLPYQLPRNLEEGLTLMS ACAPLAEMLGEKFVKAYLALKETEYEAFFRVISSWERRHLLLHV >Mature_444_residues MQDIDDFLRQHRITEVEAIIPDMAGIARGKIIPRNKFETGESMRLPQAVMVQTVTGDYPEDGTLTGVTDPDMVCVADAST ICLIPWAVDPTAQVIHDCVHFDGSPVEISPRYVLRRVLDLYRARGWKPVVAPELEFYLVDMNKDPDLPLRPPVGRTGRAE TGRQSYSIEAVNEFDPLFEDIYEYCELQGLDIDTLIHEVGAAQMEINFLHGDALSLADQVFLFKRTVREAALRHNMYATF MAKPMESEPGSAMHIHQSVVDIETGRNLFIGASGDVTPMFRSYLAGLQKYTPALMPIFAPYINSYRRLSRFMAAPINVQW GYDNRTVGFRIPHSAAAARRIENRIPGVDCNPYLAIAGTLAAGYLGVTQGLEPTEPLASDGYSLPYQLPRNLEEGLTLMS ACAPLAEMLGEKFVKAYLALKETEYEAFFRVISSWERRHLLLHV
Specific function: Involved in the breakdown of putrescine via the biosynthesis of gamma-L-glutamylputrescine [H]
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=443, Percent_Identity=26.86230248307, Blast_Score=153, Evalue=2e-37, Organism=Escherichia coli, GI87081870, Length=450, Percent_Identity=35.3333333333333, Blast_Score=243, Evalue=2e-65, Organism=Escherichia coli, GI1790301, Length=463, Percent_Identity=28.0777537796976, Blast_Score=129, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 [H]
Pfam domain/function: PF00120 Gln-synt_C [H]
EC number: =6.3.1.11 [H]
Molecular weight: Translated: 49735; Mature: 49735
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDIDDFLRQHRITEVEAIIPDMAGIARGKIIPRNKFETGESMRLPQAVMVQTVTGDYPE CCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCC DGTLTGVTDPDMVCVADASTICLIPWAVDPTAQVIHDCVHFDGSPVEISPRYVLRRVLDL CCEEECCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH YRARGWKPVVAPELEFYLVDMNKDPDLPLRPPVGRTGRAETGRQSYSIEAVNEFDPLFED HHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH IYEYCELQGLDIDTLIHEVGAAQMEINFLHGDALSLADQVFLFKRTVREAALRHNMYATF HHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAKPMESEPGSAMHIHQSVVDIETGRNLFIGASGDVTPMFRSYLAGLQKYTPALMPIFAP HCCCCCCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHH YINSYRRLSRFMAAPINVQWGYDNRTVGFRIPHSAAAARRIENRIPGVDCNPYLAIAGTL HHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHH AAGYLGVTQGLEPTEPLASDGYSLPYQLPRNLEEGLTLMSACAPLAEMLGEKFVKAYLAL HHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KETEYEAFFRVISSWERRHLLLHV HHHHHHHHHHHHHHHHHCEEEEEC >Mature Secondary Structure MQDIDDFLRQHRITEVEAIIPDMAGIARGKIIPRNKFETGESMRLPQAVMVQTVTGDYPE CCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCC DGTLTGVTDPDMVCVADASTICLIPWAVDPTAQVIHDCVHFDGSPVEISPRYVLRRVLDL CCEEECCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH YRARGWKPVVAPELEFYLVDMNKDPDLPLRPPVGRTGRAETGRQSYSIEAVNEFDPLFED HHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH IYEYCELQGLDIDTLIHEVGAAQMEINFLHGDALSLADQVFLFKRTVREAALRHNMYATF HHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAKPMESEPGSAMHIHQSVVDIETGRNLFIGASGDVTPMFRSYLAGLQKYTPALMPIFAP HCCCCCCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHH YINSYRRLSRFMAAPINVQWGYDNRTVGFRIPHSAAAARRIENRIPGVDCNPYLAIAGTL HHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHH AAGYLGVTQGLEPTEPLASDGYSLPYQLPRNLEEGLTLMSACAPLAEMLGEKFVKAYLAL HHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KETEYEAFFRVISSWERRHLLLHV HHHHHHHHHHHHHHHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]