| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is argM [C]
Identifier: 237813072
GI number: 237813072
Start: 2769724
End: 2771151
Strand: Reverse
Name: argM [C]
Synonym: GBP346_A2834
Alternate gene names: 237813072
Gene position: 2771151-2769724 (Counterclockwise)
Preceding gene: 237813073
Following gene: 237813071
Centisome position: 67.61
GC content: 67.58
Gene sequence:
>1428_bases GTGACGTATCGAACCGAAGACATCGCCTATGTAGCGCCGCTGCACGCGAGCGCCGCGCCCGCGCACCGCACGAGCGCCGA ATACCGCGCGCTCGACGCCGCGCACCACCTCCACCCGTTCTCGGACATGGGCTCGCTCAATCGCGCGGGCAGCCGCGTGA TCGTGAAGGCCGAAGGCGTCCACCTGTGGGATTCCGACGGCAACAGGATCATCGACGGCATGGCCGGGCTCTGGTGCGTG AACGTCGGCTACGGCCGCGACGAACTGATCGAGGCCGGCAGCCGCCAGTTGCGCGAGCTGCCGTTCTACAACACCTTCTT CAAGACCACCCATCCGCCCGTCATCGAGCTGTCCGCGCTGCTCGCGCAGATCGCGCCGCCCGCGTTCAACCGCTTCTTCT ATTGCAACAGCGGCTCCGAGGGCAACGACACGGTGCTGCGCATCGCGCATCAGTACTGGCGCGCGCAGAACCGCCCGCAG AAGAAGTTCGTCATTTCGCGCCGAAACGGCTACCACGGCTCGACGATCGCGGGCGCGACGCTCGGCGGCATGGGCTACAT GCACGAGCAGATGCCCTCGAAGGTCGAGCACATCGTCCACATCGATCAGCCCTATTACTTCGGCGAAGCGCGCGAGGGGC AGACGCCCGAGGCGTTCGGCCTCGAGCGCGCGCGACAGCTCGAAGCGAAGATTCTCGAGCTCGGCGCGCAGAACGTCGCG GCGTTCATCGGCGAGCCGTTCCAGGGCGCGGGCGGCGTGATCTTTCCGCCGTCGACGTACTGGCCGGAGATCGAGCGGAT CTGCCGCCAGTACGACGTGCTGCTCGTCGCCGACGAAGTGATCGGCGGCTTCGGGCGCACCGGCGAATGGTTCGCGCACC AGCACTTCGGCTTCGCGCCCGACCTGATGACGCTCGCCAAGGGCCTGACGAGCGGTTACGTGCCGATGGGCGCGGTCGCG CTGTCGGACCGGATCGCCGACGCGCTGATCGCGCACGGCGAGTTCAACCACGGGATGACGTACTCCGGGCATCCGGTCGC GGCGGCGGTGGCCGTCGCGAATCTGAAGGTGCTGCGCGACGAGCGGATCGTCGAGCGCGTGAAGACCGATACCGGCCCCT ACTTCCAGCAGCGGTTGCGCGAAACGTTCGCGAACCATCCGATCGTCGGCGACATCGCCGGCGCGGGGCTCGTCGCCGGC ATCCAGCTCGCGCGCGAGCCGCGCACGCGCAAGCGCTTCGAGAACGGCGGCGAAGTCGGCACGATCTGCCGCGACTACTG CTTCAACGGCAACCTGATCATGCGCGCGACGGGCGACCGGATGCTGCTGTCGCCGCCGCTCGTGATCTCGAAACCGCAGA TCGACGAGATCGTCGAGAAGGCGAAGCGCGCGATCGATGCGACGGCCAAGCAGTTGGGGTTTGCGTGA
Upstream 100 bases:
>100_bases GAGTACGAAGCATTTTTCCGCGTGATCAGCTCGTGGGAGCGCAGGCACCTGCTGCTGCACGTTTGAGCGTGCGCACGCAC GCCGCATTCAGGAGATCCAA
Downstream 100 bases:
>100_bases TGCGGGGTAGGGGGCGCAGCGGCCTTGTCGGGCATTCTTTTCGTGCGATAGGCGTGGCTTCTATCCACCGTTGCCGCAAT GCCGCTGATCGAATGCGCTG
Product: putative aminotransferase
Products: L-glutamate; N2-succinylglutamic-semialdehyde [C]
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MTYRTEDIAYVAPLHASAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLWDSDGNRIIDGMAGLWCV NVGYGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQ KKFVISRRNGYHGSTIAGATLGGMGYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVA AFIGEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLMTLAKGLTSGYVPMGAVA LSDRIADALIAHGEFNHGMTYSGHPVAAAVAVANLKVLRDERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAG IQLAREPRTRKRFENGGEVGTICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAKQLGFA
Sequences:
>Translated_475_residues MTYRTEDIAYVAPLHASAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLWDSDGNRIIDGMAGLWCV NVGYGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQ KKFVISRRNGYHGSTIAGATLGGMGYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVA AFIGEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLMTLAKGLTSGYVPMGAVA LSDRIADALIAHGEFNHGMTYSGHPVAAAVAVANLKVLRDERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAG IQLAREPRTRKRFENGGEVGTICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAKQLGFA >Mature_474_residues TYRTEDIAYVAPLHASAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLWDSDGNRIIDGMAGLWCVN VGYGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQK KFVISRRNGYHGSTIAGATLGGMGYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAA FIGEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLMTLAKGLTSGYVPMGAVAL SDRIADALIAHGEFNHGMTYSGHPVAAAVAVANLKVLRDERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGI QLAREPRTRKRFENGGEVGTICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAKQLGFA
Specific function: Catalyzes The Transmination Of N(2)-Succinylornithine And Alpha-Ketoglutarate Into N(2)-Succinylglutamate Semialdehyde And Glutamate. Can Also Act As A Acetylornithine Aminotransferase. [C]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI24119277, Length=360, Percent_Identity=29.1666666666667, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI37574042, Length=370, Percent_Identity=29.7297297297297, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI13994255, Length=423, Percent_Identity=28.1323877068558, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI226442705, Length=365, Percent_Identity=29.3150684931507, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI226442709, Length=323, Percent_Identity=30.6501547987616, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI4557809, Length=446, Percent_Identity=27.1300448430493, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI284507298, Length=228, Percent_Identity=32.8947368421053, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI188536080, Length=338, Percent_Identity=26.0355029585799, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI38679950, Length=338, Percent_Identity=26.0355029585799, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI38679946, Length=338, Percent_Identity=26.0355029585799, Blast_Score=86, Evalue=5e-17, Organism=Escherichia coli, GI1788044, Length=415, Percent_Identity=26.9879518072289, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1786991, Length=447, Percent_Identity=28.8590604026846, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1789759, Length=415, Percent_Identity=27.710843373494, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI145693181, Length=411, Percent_Identity=25.7907542579075, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1789016, Length=429, Percent_Identity=27.039627039627, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1787560, Length=370, Percent_Identity=29.7297297297297, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1786349, Length=307, Percent_Identity=25.7328990228013, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71992977, Length=427, Percent_Identity=28.3372365339578, Blast_Score=154, Evalue=9e-38, Organism=Caenorhabditis elegans, GI25144271, Length=423, Percent_Identity=27.6595744680851, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI32564660, Length=449, Percent_Identity=29.1759465478842, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI25144274, Length=235, Percent_Identity=33.6170212765957, Blast_Score=135, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6323470, Length=462, Percent_Identity=26.4069264069264, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6324386, Length=366, Percent_Identity=30.8743169398907, Blast_Score=139, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6324432, Length=432, Percent_Identity=25.462962962963, Blast_Score=130, Evalue=4e-31, Organism=Drosophila melanogaster, GI161085790, Length=426, Percent_Identity=28.8732394366197, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI28574759, Length=430, Percent_Identity=29.3023255813954, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI21357415, Length=442, Percent_Identity=27.6018099547511, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI21356575, Length=371, Percent_Identity=29.9191374663073, Blast_Score=144, Evalue=9e-35, Organism=Drosophila melanogaster, GI281366494, Length=342, Percent_Identity=23.6842105263158, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24667139, Length=342, Percent_Identity=23.6842105263158, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24667143, Length=342, Percent_Identity=23.6842105263158, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: 2.6.1.- [C]
Molecular weight: Translated: 52347; Mature: 52216
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYRTEDIAYVAPLHASAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGV CCCCCCCEEEEECCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHCCHHCCCCEEEEEECCE HLWDSDGNRIIDGMAGLWCVNVGYGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSAL EEECCCCCEEHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHH LAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKFVISRRNGYHGSTIAGAT HHHHCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCHH LGGMGYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVA HCCHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHH AFIGEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAP HHHCCCCCCCCCEEECCCCCCHHHHHHHHHHCEEEEEHHHHCCCCCCCHHHHHHCCCCCH DLMTLAKGLTSGYVPMGAVALSDRIADALIAHGEFNHGMTYSGHPVAAAVAVANLKVLRD HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQLAREPRTRKRFENGGEVG HHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHCCCHHHHHHHCCCCHH TICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAKQLGFA HHHHHHHCCCCEEEEECCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TYRTEDIAYVAPLHASAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGV CCCCCCEEEEECCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHCCHHCCCCEEEEEECCE HLWDSDGNRIIDGMAGLWCVNVGYGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSAL EEECCCCCEEHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHH LAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKFVISRRNGYHGSTIAGAT HHHHCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCHH LGGMGYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVA HCCHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHH AFIGEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAP HHHCCCCCCCCCEEECCCCCCHHHHHHHHHHCEEEEEHHHHCCCCCCCHHHHHHCCCCCH DLMTLAKGLTSGYVPMGAVALSDRIADALIAHGEFNHGMTYSGHPVAAAVAVANLKVLRD HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQLAREPRTRKRFENGGEVG HHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHCCCHHHHHHHCCCCHH TICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAKQLGFA HHHHHHHCCCCEEEEECCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-alpha-acetylornithine; 2-oxoglutarate [C]
Specific reaction: N-alpha-acetylornithine + 2-oxoglutarate = N-acetylglutamate semialdehyde + L-glutamate N2-succinylornithine + 2-oxoglutarate = N2-succinylglutamic-semialdehyde + L-glutamate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]