| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is pld [H]
Identifier: 237812695
GI number: 237812695
Start: 2396889
End: 2397512
Strand: Direct
Name: pld [H]
Synonym: GBP346_A2447
Alternate gene names: 237812695
Gene position: 2396889-2397512 (Clockwise)
Preceding gene: 237812694
Following gene: 237812697
Centisome position: 58.48
GC content: 66.19
Gene sequence:
>624_bases ATGCAGTTGCCGAAGCGGTTCGCCGCCGCATGTCTCGCCGCCGCTTTCCTGTGCGGCGCCCCGCCCGCCGTCAGCAAGAC GACCTCCGAATCACTGCTCGAGCGCCTCGTCGCGCTGATCGCCGACGCACTGCCGTCATCCGCGAAGCAAGCGCCGGCGG GCCAGGTCGTCGAGGCCGCGTTCTCGCCGGACGGCGGCGCCGAAGCACTCGTGTTGAAAGTGATCGGCACGTCGCGCGCG TCGCTGCGCCTCGCCGGCTATTCGTTCACGTCGCCGAAGGTCGTGCGCGCGCTGCTCGACGCACATCGGCGCGGTGTCGA CGTCGCGATCGTCGTCGACAACGACGGCAATCGCTCGAAGGCGTCGAAGCAGGCGCTCAATCTGCTCGTCAACGCGAAAG TACCGACGCGCACGATCGATCGCTACGCGATCCACCATGACAAGTACATCGTCGTCGACGGCCGCCACGTGGAGACGGGG TCGTTCAACTACAGCGCCGCCGCGGCCGCGCGCAATTCGGAAAACGTGCTCGTCGTCTGGAACAACCCTGCGCTCGCCGC GCAATACCTGAAGCACTGGCAGAACCGGTTCGATCAAGGAACCGCCTATCGGTCGGCTTATTGA
Upstream 100 bases:
>100_bases CGGCGATGCGCGTCGACAGGAACTTTCCGGAGAATCGACGAAAACCGCGCCGATGCCGTTACACTCTCGTCCTCCTCAGT TTCGAACGTCCGCCCCTCTC
Downstream 100 bases:
>100_bases CCGGCGATCGGCTGGCGCGCACCGCTTGGCGCGTCAACTCGACGACGAGCGCAGCCTTCGCTGCGGACGCGCTCGAGCAG CCCTTCACGCTCGCCGGTCC
Product: phospholipase D (PLD) family protein
Products: NA
Alternate protein names: PLD; Choline phosphatase [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MQLPKRFAAACLAAAFLCGAPPAVSKTTSESLLERLVALIADALPSSAKQAPAGQVVEAAFSPDGGAEALVLKVIGTSRA SLRLAGYSFTSPKVVRALLDAHRRGVDVAIVVDNDGNRSKASKQALNLLVNAKVPTRTIDRYAIHHDKYIVVDGRHVETG SFNYSAAAAARNSENVLVVWNNPALAAQYLKHWQNRFDQGTAYRSAY
Sequences:
>Translated_207_residues MQLPKRFAAACLAAAFLCGAPPAVSKTTSESLLERLVALIADALPSSAKQAPAGQVVEAAFSPDGGAEALVLKVIGTSRA SLRLAGYSFTSPKVVRALLDAHRRGVDVAIVVDNDGNRSKASKQALNLLVNAKVPTRTIDRYAIHHDKYIVVDGRHVETG SFNYSAAAAARNSENVLVVWNNPALAAQYLKHWQNRFDQGTAYRSAY >Mature_207_residues MQLPKRFAAACLAAAFLCGAPPAVSKTTSESLLERLVALIADALPSSAKQAPAGQVVEAAFSPDGGAEALVLKVIGTSRA SLRLAGYSFTSPKVVRALLDAHRRGVDVAIVVDNDGNRSKASKQALNLLVNAKVPTRTIDRYAIHHDKYIVVDGRHVETG SFNYSAAAAARNSENVLVVWNNPALAAQYLKHWQNRFDQGTAYRSAY
Specific function: Could be a virulence factor [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PLD phosphodiesterase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 [H]
Pfam domain/function: NA
EC number: =3.1.4.4 [H]
Molecular weight: Translated: 22129; Mature: 22129
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPKRFAAACLAAAFLCGAPPAVSKTTSESLLERLVALIADALPSSAKQAPAGQVVEAA CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEE FSPDGGAEALVLKVIGTSRASLRLAGYSFTSPKVVRALLDAHRRGVDVAIVVDNDGNRSK CCCCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHH ASKQALNLLVNAKVPTRTIDRYAIHHDKYIVVDGRHVETGSFNYSAAAAARNSENVLVVW HHHHHHHHHEECCCCCHHHHHHEEECCCEEEEECCEEECCCCCCHHHHHCCCCCCEEEEE NNPALAAQYLKHWQNRFDQGTAYRSAY CCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQLPKRFAAACLAAAFLCGAPPAVSKTTSESLLERLVALIADALPSSAKQAPAGQVVEAA CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEE FSPDGGAEALVLKVIGTSRASLRLAGYSFTSPKVVRALLDAHRRGVDVAIVVDNDGNRSK CCCCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHH ASKQALNLLVNAKVPTRTIDRYAIHHDKYIVVDGRHVETGSFNYSAAAAARNSENVLVVW HHHHHHHHHEECCCCCHHHHHHEEECCCEEEEECCEEECCCCCCHHHHHCCCCCCEEEEE NNPALAAQYLKHWQNRFDQGTAYRSAY CCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA