| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812697
Identifier: 237812697
GI number: 237812697
Start: 2399027
End: 2399221
Strand: Direct
Name: 237812697
Synonym: GBP346_A2449
Alternate gene names: NA
Gene position: 2399027-2399221 (Clockwise)
Preceding gene: 237812695
Following gene: 237812698
Centisome position: 58.53
GC content: 50.77
Gene sequence:
>195_bases TTGGTCACGTTTTCCGTGAATTGGAACAATACCGCGGCCCGCTACAACAGTATTACGACGTGGTCGGGGCTTTGCCAAAT CACGAACAACGTGCCGACGATCACGGCGCTCTACTATTACTCGAATGCTTTCGCCCAGTACTCCTGGAAGCACGTCAATG TGGGACAAGACATTTTTCATCCGATTGCTCCTTGA
Upstream 100 bases:
>100_bases CACCTATGTTTCACCGTCCGGAACCACCGGACAAACCTTTTCTCTTTCTGGCTGGTTCTATGCAGCACCGCCGGCAAATA ACGGCCTAGATCAAGTGACA
Downstream 100 bases:
>100_bases TAAAAAAGCATAAAGCGGTAGGCGCCATTTGAACGTGCTGCAATTTCGGTTCCGCTTGCAATGCGCCAGAAGGTGATGCT GAACGCTGTGACTTCTACGG
Product: putative exported avidin family protein
Products: NA
Alternate protein names: Streptavidin
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MVTFSVNWNNTAARYNSITTWSGLCQITNNVPTITALYYYSNAFAQYSWKHVNVGQDIFHPIAP
Sequences:
>Translated_64_residues MVTFSVNWNNTAARYNSITTWSGLCQITNNVPTITALYYYSNAFAQYSWKHVNVGQDIFHPIAP >Mature_64_residues MVTFSVNWNNTAARYNSITTWSGLCQITNNVPTITALYYYSNAFAQYSWKHVNVGQDIFHPIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7302; Mature: 7302
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTFSVNWNNTAARYNSITTWSGLCQITNNVPTITALYYYSNAFAQYSWKHVNVGQDIFH CEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCEEECCCCHHHHC PIAP CCCC >Mature Secondary Structure MVTFSVNWNNTAARYNSITTWSGLCQITNNVPTITALYYYSNAFAQYSWKHVNVGQDIFH CEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCEEECCCCHHHHC PIAP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA