Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237811792

Identifier: 237811792

GI number: 237811792

Start: 1469170

End: 1470243

Strand: Direct

Name: 237811792

Synonym: GBP346_A1530

Alternate gene names: NA

Gene position: 1469170-1470243 (Clockwise)

Preceding gene: 237811790

Following gene: 237811793

Centisome position: 35.85

GC content: 71.69

Gene sequence:

>1074_bases
ATGCCGAATTGCGCCGACATTGCCGCCGCCGACCATGCCCGCCGCCGCGCGCTCGCGATGCGCCGCTATCGTGCCGGCGC
GGCGTCGTGCGCGGCGGTGGCGCTCGTCGACGCCGTGTGGCTGCACGCGGGCGGCTATGCGTTGCAATGGTCCGGCGTGG
CCGTGGCCGCGCGGGCGATCGCCGTCTGCGCGGCGTTCTCGCTCGTATTGCGCGGCGTCGCACGCGTGCCGCGCTACGCG
AGCGTCGCGGCACGTTTTCGCTACGGTGAGGCCGCTCGCACGTTCGCATGGCTGGCGCTGCTGGCGGCGTTCGTCGCGGC
GGCGGGCATCCTGTCCTACCTGTGCGTGACATTGAAGCCGCCGTTGATCGACGGTGCGCTGATTCGGCTCGACGCCCGCC
TCGGCTTCGACTGGCCCGCCGTCTACGAGCGGATTCGCGCGCATCCGGCGCTGCGGCGCGCGCTCGCGTTCGCGTACGAC
AGCGCGCAGTGGCAGTTGATCGGGATACCGGTCTGGCTGGGCTTGACGAGGCGCGACGACGACCTGTCCGAGTTCATCGC
GCTTTTCATGCTGACGAGCGTGATGGTGCTGCTGATTTCGACGCCGTTTCCGGCGGCGAGCGCGTTCCTGCATTTCCGGG
TGGCCGATCCGATCGCGCTCGCCGGCGTGAGCGATTTCGTGCGATTGCGCGACGGGACGCTGCGCGTGATCGATCCGGCC
GCGCTGCAAGGCATGGTATCGATGCCATCGTTCCATACGGTGCTTGGCGTGTTGTTCGCGTATGCGTTGCGGCGCGGGCG
TGTCGTCGCGCCGCTCGCGCTGCTGTTCAACGGCTGGATGATCGCGTCGACGCCGACGCAGGGCGGTCATTACTTCGTCG
ACGTGCTCGCCGGCCTGCTCGTTGCGTGTGCGGCGATCGCCGCGCTGCGCTACGCGGCCGATGCGCGCGCGGGAACCGGC
GACACCGCGCGCTCCGGCCGGCCGCGGCCGTCGATGGCGGGGCCGGCGGCGGACGGCGAGGCGGCGCTTTCGGCGCGCGC
CGCGCGCGCATCGCGGCCGAGCGGCGACGCGTGA

Upstream 100 bases:

>100_bases
GGCCGCGTTTCGTCGGCTCCGGGCGCGCCGCGCACGGCGAACCGCCGAAACCATGCTGGAGACCGCCGGGCGTAACCGTC
CGCCCGCCTCAGAGTGAATC

Downstream 100 bases:

>100_bases
ACCGCCGACGGGCCTCGGGATTACATTGCGTTCGCCTGATTCGCTTGCTATCACAGATGACGACGGACGTTCGCATCCCG
CGATATTCGCCCCGTCTACG

Product: PAP2 family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MPNCADIAAADHARRRALAMRRYRAGAASCAAVALVDAVWLHAGGYALQWSGVAVAARAIAVCAAFSLVLRGVARVPRYA
SVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKPPLIDGALIRLDARLGFDWPAVYERIRAHPALRRALAFAYD
SAQWQLIGIPVWLGLTRRDDDLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA
ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLLVACAAIAALRYAADARAGTG
DTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA

Sequences:

>Translated_357_residues
MPNCADIAAADHARRRALAMRRYRAGAASCAAVALVDAVWLHAGGYALQWSGVAVAARAIAVCAAFSLVLRGVARVPRYA
SVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKPPLIDGALIRLDARLGFDWPAVYERIRAHPALRRALAFAYD
SAQWQLIGIPVWLGLTRRDDDLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA
ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLLVACAAIAALRYAADARAGTG
DTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA
>Mature_356_residues
PNCADIAAADHARRRALAMRRYRAGAASCAAVALVDAVWLHAGGYALQWSGVAVAARAIAVCAAFSLVLRGVARVPRYAS
VAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKPPLIDGALIRLDARLGFDWPAVYERIRAHPALRRALAFAYDS
AQWQLIGIPVWLGLTRRDDDLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPAA
LQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLLVACAAIAALRYAADARAGTGD
TARSGRPRPSMAGPAADGEAALSARAARASRPSGDA

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37816; Mature: 37685

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNCADIAAADHARRRALAMRRYRAGAASCAAVALVDAVWLHAGGYALQWSGVAVAARAI
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
AVCAAFSLVLRGVARVPRYASVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKP
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLIDGALIRLDARLGFDWPAVYERIRAHPALRRALAFAYDSAQWQLIGIPVWLGLTRRDD
CCCCCEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCC
DLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCHHHHHHHHHHHHCCCCEEEECHH
ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLL
HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH
VACAAIAALRYAADARAGTGDTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PNCADIAAADHARRRALAMRRYRAGAASCAAVALVDAVWLHAGGYALQWSGVAVAARAI
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
AVCAAFSLVLRGVARVPRYASVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKP
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLIDGALIRLDARLGFDWPAVYERIRAHPALRRALAFAYDSAQWQLIGIPVWLGLTRRDD
CCCCCEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCC
DLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCHHHHHHHHHHHHCCCCEEEECHH
ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLL
HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH
VACAAIAALRYAADARAGTGDTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA