| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811792
Identifier: 237811792
GI number: 237811792
Start: 1469170
End: 1470243
Strand: Direct
Name: 237811792
Synonym: GBP346_A1530
Alternate gene names: NA
Gene position: 1469170-1470243 (Clockwise)
Preceding gene: 237811790
Following gene: 237811793
Centisome position: 35.85
GC content: 71.69
Gene sequence:
>1074_bases ATGCCGAATTGCGCCGACATTGCCGCCGCCGACCATGCCCGCCGCCGCGCGCTCGCGATGCGCCGCTATCGTGCCGGCGC GGCGTCGTGCGCGGCGGTGGCGCTCGTCGACGCCGTGTGGCTGCACGCGGGCGGCTATGCGTTGCAATGGTCCGGCGTGG CCGTGGCCGCGCGGGCGATCGCCGTCTGCGCGGCGTTCTCGCTCGTATTGCGCGGCGTCGCACGCGTGCCGCGCTACGCG AGCGTCGCGGCACGTTTTCGCTACGGTGAGGCCGCTCGCACGTTCGCATGGCTGGCGCTGCTGGCGGCGTTCGTCGCGGC GGCGGGCATCCTGTCCTACCTGTGCGTGACATTGAAGCCGCCGTTGATCGACGGTGCGCTGATTCGGCTCGACGCCCGCC TCGGCTTCGACTGGCCCGCCGTCTACGAGCGGATTCGCGCGCATCCGGCGCTGCGGCGCGCGCTCGCGTTCGCGTACGAC AGCGCGCAGTGGCAGTTGATCGGGATACCGGTCTGGCTGGGCTTGACGAGGCGCGACGACGACCTGTCCGAGTTCATCGC GCTTTTCATGCTGACGAGCGTGATGGTGCTGCTGATTTCGACGCCGTTTCCGGCGGCGAGCGCGTTCCTGCATTTCCGGG TGGCCGATCCGATCGCGCTCGCCGGCGTGAGCGATTTCGTGCGATTGCGCGACGGGACGCTGCGCGTGATCGATCCGGCC GCGCTGCAAGGCATGGTATCGATGCCATCGTTCCATACGGTGCTTGGCGTGTTGTTCGCGTATGCGTTGCGGCGCGGGCG TGTCGTCGCGCCGCTCGCGCTGCTGTTCAACGGCTGGATGATCGCGTCGACGCCGACGCAGGGCGGTCATTACTTCGTCG ACGTGCTCGCCGGCCTGCTCGTTGCGTGTGCGGCGATCGCCGCGCTGCGCTACGCGGCCGATGCGCGCGCGGGAACCGGC GACACCGCGCGCTCCGGCCGGCCGCGGCCGTCGATGGCGGGGCCGGCGGCGGACGGCGAGGCGGCGCTTTCGGCGCGCGC CGCGCGCGCATCGCGGCCGAGCGGCGACGCGTGA
Upstream 100 bases:
>100_bases GGCCGCGTTTCGTCGGCTCCGGGCGCGCCGCGCACGGCGAACCGCCGAAACCATGCTGGAGACCGCCGGGCGTAACCGTC CGCCCGCCTCAGAGTGAATC
Downstream 100 bases:
>100_bases ACCGCCGACGGGCCTCGGGATTACATTGCGTTCGCCTGATTCGCTTGCTATCACAGATGACGACGGACGTTCGCATCCCG CGATATTCGCCCCGTCTACG
Product: PAP2 family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPNCADIAAADHARRRALAMRRYRAGAASCAAVALVDAVWLHAGGYALQWSGVAVAARAIAVCAAFSLVLRGVARVPRYA SVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKPPLIDGALIRLDARLGFDWPAVYERIRAHPALRRALAFAYD SAQWQLIGIPVWLGLTRRDDDLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLLVACAAIAALRYAADARAGTG DTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA
Sequences:
>Translated_357_residues MPNCADIAAADHARRRALAMRRYRAGAASCAAVALVDAVWLHAGGYALQWSGVAVAARAIAVCAAFSLVLRGVARVPRYA SVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKPPLIDGALIRLDARLGFDWPAVYERIRAHPALRRALAFAYD SAQWQLIGIPVWLGLTRRDDDLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLLVACAAIAALRYAADARAGTG DTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA >Mature_356_residues PNCADIAAADHARRRALAMRRYRAGAASCAAVALVDAVWLHAGGYALQWSGVAVAARAIAVCAAFSLVLRGVARVPRYAS VAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKPPLIDGALIRLDARLGFDWPAVYERIRAHPALRRALAFAYDS AQWQLIGIPVWLGLTRRDDDLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPAA LQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLLVACAAIAALRYAADARAGTGD TARSGRPRPSMAGPAADGEAALSARAARASRPSGDA
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37816; Mature: 37685
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNCADIAAADHARRRALAMRRYRAGAASCAAVALVDAVWLHAGGYALQWSGVAVAARAI CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH AVCAAFSLVLRGVARVPRYASVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKP HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLIDGALIRLDARLGFDWPAVYERIRAHPALRRALAFAYDSAQWQLIGIPVWLGLTRRDD CCCCCEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCC DLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA CHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCHHHHHHHHHHHHCCCCEEEECHH ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLL HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH VACAAIAALRYAADARAGTGDTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PNCADIAAADHARRRALAMRRYRAGAASCAAVALVDAVWLHAGGYALQWSGVAVAARAI CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH AVCAAFSLVLRGVARVPRYASVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKP HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLIDGALIRLDARLGFDWPAVYERIRAHPALRRALAFAYDSAQWQLIGIPVWLGLTRRDD CCCCCEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCC DLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA CHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCHHHHHHHHHHHHCCCCEEEECHH ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLL HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH VACAAIAALRYAADARAGTGDTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA