| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811793
Identifier: 237811793
GI number: 237811793
Start: 1470365
End: 1470934
Strand: Direct
Name: 237811793
Synonym: GBP346_A1531
Alternate gene names: NA
Gene position: 1470365-1470934 (Clockwise)
Preceding gene: 237811792
Following gene: 237811796
Centisome position: 35.88
GC content: 65.61
Gene sequence:
>570_bases ATGGCCAGCCCGGTTGCCCACAAGATCATGATCGTGCGTCATGCGGAGAAACCGGCCGGTGACGGCGCGCCATACGGGGT GAACGCCAAGGGCGAGCAGGACGTGGAGGCGCTCACCGTGTTCGGCTGGCAACGCGCGGGCGCGCTCGCGGTGCTGTTTG CGCCGAGCCGGGGTCCGCTGCAGCACGCCGAGCTGGCGACGCCGGATTGGCTGTTCGCGGCGGCGGTCGCCAAGCATGCG AAGAGCGAGCGTCCGATCGACACGATCACGCCGCTCGCGCACAAACTGGGGCTCGCGATCGGCGACGCCTATACGAAAGG CCAGGAGAAGGATTTGGCCCAGGCAGCCGTCGCCAGCAAGGGATGCGTGCTGATCGCGTGGCAGCACGAAGACATTCCCG CCATCGCCGATGCGCTTCCGCTCGGCAAGCAGACGGTGCCGCAGAAATGGCCCGATGATCGCTTCGATATCGTCTGGGTG TTCGATCTCGACACCGGGAGCGGCACGTATCGGTTTAGCCAGGTGCCGCAGATGTTGTTGAAGGGCGATCGGAACAGCGT GATCGAGTGA
Upstream 100 bases:
>100_bases TACATTGCGTTCGCCTGATTCGCTTGCTATCACAGATGACGACGGACGTTCGCATCCCGCGATATTCGCCCCGTCTACGA ACAACGACAAGGAGGACGCC
Downstream 100 bases:
>100_bases GCGGCGAGGGCATTCGGCGCGGCGCGGATCGTTACACGGCCGTTCGACGGCGTTCGTCGATCGGGGGCGTGTTGCCGATG CCGGCGGGAATGGCGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MASPVAHKIMIVRHAEKPAGDGAPYGVNAKGEQDVEALTVFGWQRAGALAVLFAPSRGPLQHAELATPDWLFAAAVAKHA KSERPIDTITPLAHKLGLAIGDAYTKGQEKDLAQAAVASKGCVLIAWQHEDIPAIADALPLGKQTVPQKWPDDRFDIVWV FDLDTGSGTYRFSQVPQMLLKGDRNSVIE
Sequences:
>Translated_189_residues MASPVAHKIMIVRHAEKPAGDGAPYGVNAKGEQDVEALTVFGWQRAGALAVLFAPSRGPLQHAELATPDWLFAAAVAKHA KSERPIDTITPLAHKLGLAIGDAYTKGQEKDLAQAAVASKGCVLIAWQHEDIPAIADALPLGKQTVPQKWPDDRFDIVWV FDLDTGSGTYRFSQVPQMLLKGDRNSVIE >Mature_188_residues ASPVAHKIMIVRHAEKPAGDGAPYGVNAKGEQDVEALTVFGWQRAGALAVLFAPSRGPLQHAELATPDWLFAAAVAKHAK SERPIDTITPLAHKLGLAIGDAYTKGQEKDLAQAAVASKGCVLIAWQHEDIPAIADALPLGKQTVPQKWPDDRFDIVWVF DLDTGSGTYRFSQVPQMLLKGDRNSVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20354; Mature: 20223
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPVAHKIMIVRHAEKPAGDGAPYGVNAKGEQDVEALTVFGWQRAGALAVLFAPSRGPL CCCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEEECCCCCC QHAELATPDWLFAAAVAKHAKSERPIDTITPLAHKLGLAIGDAYTKGQEKDLAQAAVASK CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCC GCVLIAWQHEDIPAIADALPLGKQTVPQKWPDDRFDIVWVFDLDTGSGTYRFSQVPQMLL CEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEHHHHHHHHH KGDRNSVIE CCCCCCCCC >Mature Secondary Structure ASPVAHKIMIVRHAEKPAGDGAPYGVNAKGEQDVEALTVFGWQRAGALAVLFAPSRGPL CCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEEECCCCCC QHAELATPDWLFAAAVAKHAKSERPIDTITPLAHKLGLAIGDAYTKGQEKDLAQAAVASK CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCC GCVLIAWQHEDIPAIADALPLGKQTVPQKWPDDRFDIVWVFDLDTGSGTYRFSQVPQMLL CEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEHHHHHHHHH KGDRNSVIE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA