Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229918145

Identifier: 229918145

GI number: 229918145

Start: 2381736

End: 2382806

Strand: Direct

Name: 229918145

Synonym: EAT1b_2425

Alternate gene names: NA

Gene position: 2381736-2382806 (Clockwise)

Preceding gene: 229918144

Following gene: 229918146

Centisome position: 79.39

GC content: 45.19

Gene sequence:

>1071_bases
GTGGATGTTATTCAAGATACAGAACAATCAAATCGGTTTATCCGATTTGCTGACAACGAATGTGTGGAATCTAGTCGCTT
ATACGAAGTGCTAGCTCGAGAAGTGGCCCAGCATGAATGGCTCTTGTCTTTGTGTGAAGACATACCGAAGGGACAACCTG
CTCCAAATCTATTGTTTGCAGCCGTTCATGAGTTGGTACTTCAACACTCTGCTGATGAGTTGGCCACCTATTATCCTAGC
GTGACACAATATCCAAAACGAGCTGAAGATGTATTTCCCTCTTTTTTAGCATTTTGCCATACATACGAAAGTGAGCTCCG
TCATCGATTGAGAACTCGTCGTGTGCAAACGAACGAGGTTCAACGATGCGCCTACTTGTATCCAATCTTTTCGAAGATTC
AACAACAGACGAAACGACCACTCGGACTGCTCGAAATCGGAACGAGTGCAGGGCTTCAACTATTTGTGGATCAATATGCT
TATGAGTATAATGGCGTCCCATTCAATCCGATAAACGCCTCATCAGTAAACATCACAGCGGCCGTTGAATCAGACGAACC
ATTCCGTCTCGAAGTTACGACGCCATTAGACATCGGAACACGTCTTGGTGTCGATTTGAACATTGTGGATTTGACAGACG
AAGCAGAGCGGTCATGGTTGAATGCGTTAATCTGGCCAGAACATGAGACACGACGGCAACTGCTTCAGGCCGCCATGAAT
GAAGTCAATTTAAATATGGTGACGCTCATTGAAGGGGATGGTGTGACGATGTTACAAGAACTCGTATCGCGTGTACCTGA
AGTGGAGATGCTATGTATCTTCCATACACACGTTGCGAATCAGATGTCACGTCCCGTCAAAGAAGAACTCTTGAGGCAAG
TCGAGCGAATTGGACAAACACGAGACGTCTTCCATATCTATAACAATGTTCAAGATTGTTATCTACATGTCGATTTGTAT
CTGGACGGTCAACTCACAGCGGTGACGTATGCAGAAACGGAGGGACACGGCCGTCAATTTCAAATTCTGACGCCACTCGA
TTCCTTGTTTCATCAAGGATCATTTGAATGA

Upstream 100 bases:

>100_bases
ATGACTCTAACTGAGGTTAGGGTCTTTTTTGTGTTCTCTATCCCTTTTTGAGAAGGAAGGACATTCATTCAGCTCGAATT
TTTTAACAAGAAGAAATGAG

Downstream 100 bases:

>100_bases
TTAAGGTATACCAAGATATTATTTCTAATGATTTTAGAAAAACTTACGAATACTTGTTGACAGTTTAATAGTATAGGTGT
ATATTAACTATAGTCGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MDVIQDTEQSNRFIRFADNECVESSRLYEVLAREVAQHEWLLSLCEDIPKGQPAPNLLFAAVHELVLQHSADELATYYPS
VTQYPKRAEDVFPSFLAFCHTYESELRHRLRTRRVQTNEVQRCAYLYPIFSKIQQQTKRPLGLLEIGTSAGLQLFVDQYA
YEYNGVPFNPINASSVNITAAVESDEPFRLEVTTPLDIGTRLGVDLNIVDLTDEAERSWLNALIWPEHETRRQLLQAAMN
EVNLNMVTLIEGDGVTMLQELVSRVPEVEMLCIFHTHVANQMSRPVKEELLRQVERIGQTRDVFHIYNNVQDCYLHVDLY
LDGQLTAVTYAETEGHGRQFQILTPLDSLFHQGSFE

Sequences:

>Translated_356_residues
MDVIQDTEQSNRFIRFADNECVESSRLYEVLAREVAQHEWLLSLCEDIPKGQPAPNLLFAAVHELVLQHSADELATYYPS
VTQYPKRAEDVFPSFLAFCHTYESELRHRLRTRRVQTNEVQRCAYLYPIFSKIQQQTKRPLGLLEIGTSAGLQLFVDQYA
YEYNGVPFNPINASSVNITAAVESDEPFRLEVTTPLDIGTRLGVDLNIVDLTDEAERSWLNALIWPEHETRRQLLQAAMN
EVNLNMVTLIEGDGVTMLQELVSRVPEVEMLCIFHTHVANQMSRPVKEELLRQVERIGQTRDVFHIYNNVQDCYLHVDLY
LDGQLTAVTYAETEGHGRQFQILTPLDSLFHQGSFE
>Mature_356_residues
MDVIQDTEQSNRFIRFADNECVESSRLYEVLAREVAQHEWLLSLCEDIPKGQPAPNLLFAAVHELVLQHSADELATYYPS
VTQYPKRAEDVFPSFLAFCHTYESELRHRLRTRRVQTNEVQRCAYLYPIFSKIQQQTKRPLGLLEIGTSAGLQLFVDQYA
YEYNGVPFNPINASSVNITAAVESDEPFRLEVTTPLDIGTRLGVDLNIVDLTDEAERSWLNALIWPEHETRRQLLQAAMN
EVNLNMVTLIEGDGVTMLQELVSRVPEVEMLCIFHTHVANQMSRPVKEELLRQVERIGQTRDVFHIYNNVQDCYLHVDLY
LDGQLTAVTYAETEGHGRQFQILTPLDSLFHQGSFE

Specific function: Unknown

COG id: COG4427

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40904; Mature: 40904

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVIQDTEQSNRFIRFADNECVESSRLYEVLAREVAQHEWLLSLCEDIPKGQPAPNLLFA
CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
AVHELVLQHSADELATYYPSVTQYPKRAEDVFPSFLAFCHTYESELRHRLRTRRVQTNEV
HHHHHHHHCCHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QRCAYLYPIFSKIQQQTKRPLGLLEIGTSAGLQLFVDQYAYEYNGVPFNPINASSVNITA
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
AVESDEPFRLEVTTPLDIGTRLGVDLNIVDLTDEAERSWLNALIWPEHETRRQLLQAAMN
EECCCCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
EVNLNMVTLIEGDGVTMLQELVSRVPEVEMLCIFHTHVANQMSRPVKEELLRQVERIGQT
HCCCEEEEEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCH
RDVFHIYNNVQDCYLHVDLYLDGQLTAVTYAETEGHGRQFQILTPLDSLFHQGSFE
HHHHHHHCCCEEEEEEEEEEECCEEEEEEEEECCCCCCEEEEECHHHHHHCCCCCC
>Mature Secondary Structure
MDVIQDTEQSNRFIRFADNECVESSRLYEVLAREVAQHEWLLSLCEDIPKGQPAPNLLFA
CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
AVHELVLQHSADELATYYPSVTQYPKRAEDVFPSFLAFCHTYESELRHRLRTRRVQTNEV
HHHHHHHHCCHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QRCAYLYPIFSKIQQQTKRPLGLLEIGTSAGLQLFVDQYAYEYNGVPFNPINASSVNITA
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
AVESDEPFRLEVTTPLDIGTRLGVDLNIVDLTDEAERSWLNALIWPEHETRRQLLQAAMN
EECCCCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
EVNLNMVTLIEGDGVTMLQELVSRVPEVEMLCIFHTHVANQMSRPVKEELLRQVERIGQT
HCCCEEEEEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCH
RDVFHIYNNVQDCYLHVDLYLDGQLTAVTYAETEGHGRQFQILTPLDSLFHQGSFE
HHHHHHHCCCEEEEEEEEEEECCEEEEEEEEECCCCCCEEEEECHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA