| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918145
Identifier: 229918145
GI number: 229918145
Start: 2381736
End: 2382806
Strand: Direct
Name: 229918145
Synonym: EAT1b_2425
Alternate gene names: NA
Gene position: 2381736-2382806 (Clockwise)
Preceding gene: 229918144
Following gene: 229918146
Centisome position: 79.39
GC content: 45.19
Gene sequence:
>1071_bases GTGGATGTTATTCAAGATACAGAACAATCAAATCGGTTTATCCGATTTGCTGACAACGAATGTGTGGAATCTAGTCGCTT ATACGAAGTGCTAGCTCGAGAAGTGGCCCAGCATGAATGGCTCTTGTCTTTGTGTGAAGACATACCGAAGGGACAACCTG CTCCAAATCTATTGTTTGCAGCCGTTCATGAGTTGGTACTTCAACACTCTGCTGATGAGTTGGCCACCTATTATCCTAGC GTGACACAATATCCAAAACGAGCTGAAGATGTATTTCCCTCTTTTTTAGCATTTTGCCATACATACGAAAGTGAGCTCCG TCATCGATTGAGAACTCGTCGTGTGCAAACGAACGAGGTTCAACGATGCGCCTACTTGTATCCAATCTTTTCGAAGATTC AACAACAGACGAAACGACCACTCGGACTGCTCGAAATCGGAACGAGTGCAGGGCTTCAACTATTTGTGGATCAATATGCT TATGAGTATAATGGCGTCCCATTCAATCCGATAAACGCCTCATCAGTAAACATCACAGCGGCCGTTGAATCAGACGAACC ATTCCGTCTCGAAGTTACGACGCCATTAGACATCGGAACACGTCTTGGTGTCGATTTGAACATTGTGGATTTGACAGACG AAGCAGAGCGGTCATGGTTGAATGCGTTAATCTGGCCAGAACATGAGACACGACGGCAACTGCTTCAGGCCGCCATGAAT GAAGTCAATTTAAATATGGTGACGCTCATTGAAGGGGATGGTGTGACGATGTTACAAGAACTCGTATCGCGTGTACCTGA AGTGGAGATGCTATGTATCTTCCATACACACGTTGCGAATCAGATGTCACGTCCCGTCAAAGAAGAACTCTTGAGGCAAG TCGAGCGAATTGGACAAACACGAGACGTCTTCCATATCTATAACAATGTTCAAGATTGTTATCTACATGTCGATTTGTAT CTGGACGGTCAACTCACAGCGGTGACGTATGCAGAAACGGAGGGACACGGCCGTCAATTTCAAATTCTGACGCCACTCGA TTCCTTGTTTCATCAAGGATCATTTGAATGA
Upstream 100 bases:
>100_bases ATGACTCTAACTGAGGTTAGGGTCTTTTTTGTGTTCTCTATCCCTTTTTGAGAAGGAAGGACATTCATTCAGCTCGAATT TTTTAACAAGAAGAAATGAG
Downstream 100 bases:
>100_bases TTAAGGTATACCAAGATATTATTTCTAATGATTTTAGAAAAACTTACGAATACTTGTTGACAGTTTAATAGTATAGGTGT ATATTAACTATAGTCGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MDVIQDTEQSNRFIRFADNECVESSRLYEVLAREVAQHEWLLSLCEDIPKGQPAPNLLFAAVHELVLQHSADELATYYPS VTQYPKRAEDVFPSFLAFCHTYESELRHRLRTRRVQTNEVQRCAYLYPIFSKIQQQTKRPLGLLEIGTSAGLQLFVDQYA YEYNGVPFNPINASSVNITAAVESDEPFRLEVTTPLDIGTRLGVDLNIVDLTDEAERSWLNALIWPEHETRRQLLQAAMN EVNLNMVTLIEGDGVTMLQELVSRVPEVEMLCIFHTHVANQMSRPVKEELLRQVERIGQTRDVFHIYNNVQDCYLHVDLY LDGQLTAVTYAETEGHGRQFQILTPLDSLFHQGSFE
Sequences:
>Translated_356_residues MDVIQDTEQSNRFIRFADNECVESSRLYEVLAREVAQHEWLLSLCEDIPKGQPAPNLLFAAVHELVLQHSADELATYYPS VTQYPKRAEDVFPSFLAFCHTYESELRHRLRTRRVQTNEVQRCAYLYPIFSKIQQQTKRPLGLLEIGTSAGLQLFVDQYA YEYNGVPFNPINASSVNITAAVESDEPFRLEVTTPLDIGTRLGVDLNIVDLTDEAERSWLNALIWPEHETRRQLLQAAMN EVNLNMVTLIEGDGVTMLQELVSRVPEVEMLCIFHTHVANQMSRPVKEELLRQVERIGQTRDVFHIYNNVQDCYLHVDLY LDGQLTAVTYAETEGHGRQFQILTPLDSLFHQGSFE >Mature_356_residues MDVIQDTEQSNRFIRFADNECVESSRLYEVLAREVAQHEWLLSLCEDIPKGQPAPNLLFAAVHELVLQHSADELATYYPS VTQYPKRAEDVFPSFLAFCHTYESELRHRLRTRRVQTNEVQRCAYLYPIFSKIQQQTKRPLGLLEIGTSAGLQLFVDQYA YEYNGVPFNPINASSVNITAAVESDEPFRLEVTTPLDIGTRLGVDLNIVDLTDEAERSWLNALIWPEHETRRQLLQAAMN EVNLNMVTLIEGDGVTMLQELVSRVPEVEMLCIFHTHVANQMSRPVKEELLRQVERIGQTRDVFHIYNNVQDCYLHVDLY LDGQLTAVTYAETEGHGRQFQILTPLDSLFHQGSFE
Specific function: Unknown
COG id: COG4427
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40904; Mature: 40904
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVIQDTEQSNRFIRFADNECVESSRLYEVLAREVAQHEWLLSLCEDIPKGQPAPNLLFA CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH AVHELVLQHSADELATYYPSVTQYPKRAEDVFPSFLAFCHTYESELRHRLRTRRVQTNEV HHHHHHHHCCHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH QRCAYLYPIFSKIQQQTKRPLGLLEIGTSAGLQLFVDQYAYEYNGVPFNPINASSVNITA HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEE AVESDEPFRLEVTTPLDIGTRLGVDLNIVDLTDEAERSWLNALIWPEHETRRQLLQAAMN EECCCCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH EVNLNMVTLIEGDGVTMLQELVSRVPEVEMLCIFHTHVANQMSRPVKEELLRQVERIGQT HCCCEEEEEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCH RDVFHIYNNVQDCYLHVDLYLDGQLTAVTYAETEGHGRQFQILTPLDSLFHQGSFE HHHHHHHCCCEEEEEEEEEEECCEEEEEEEEECCCCCCEEEEECHHHHHHCCCCCC >Mature Secondary Structure MDVIQDTEQSNRFIRFADNECVESSRLYEVLAREVAQHEWLLSLCEDIPKGQPAPNLLFA CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH AVHELVLQHSADELATYYPSVTQYPKRAEDVFPSFLAFCHTYESELRHRLRTRRVQTNEV HHHHHHHHCCHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH QRCAYLYPIFSKIQQQTKRPLGLLEIGTSAGLQLFVDQYAYEYNGVPFNPINASSVNITA HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEE AVESDEPFRLEVTTPLDIGTRLGVDLNIVDLTDEAERSWLNALIWPEHETRRQLLQAAMN EECCCCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH EVNLNMVTLIEGDGVTMLQELVSRVPEVEMLCIFHTHVANQMSRPVKEELLRQVERIGQT HCCCEEEEEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCH RDVFHIYNNVQDCYLHVDLYLDGQLTAVTYAETEGHGRQFQILTPLDSLFHQGSFE HHHHHHHCCCEEEEEEEEEEECCEEEEEEEEECCCCCCEEEEECHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA