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The map label for this gene is yhbA [H]

Identifier: 229918146

GI number: 229918146

Start: 2383064

End: 2384212

Strand: Direct

Name: yhbA [H]

Synonym: EAT1b_2426

Alternate gene names: 229918146

Gene position: 2383064-2384212 (Clockwise)

Preceding gene: 229918145

Following gene: 229918147

Centisome position: 79.44

GC content: 50.04

Gene sequence:

>1149_bases
ATGGACCCGTACACATTAAAACAACAAATCTTAGCGTATGCCGAGACCATCGGGATTGATGAGTTGAAAGTGACGACGGC
TGATCCGTTCATCGTCATGAAACAGCGACTTATTCGGCAACAAGAGAAAGGGTTTGCCTCTGGGTTTGAAGAGCCCGACT
TAGAGAAACGTACGAACCCGGAGCTCTTACTTGAAGAAGCCCAGTCGATCATTGCGATTGCCATCGCCTATCCGAGTAAA
TTAAAAGATGCTCCTCGGAGTGTCGCCGGCGAGAGACGAGGGTTGTTTGCTCGGGCCTCATGGGGACTTGATTACCATCG
GGCCGTCGGCAATCGATTAGAGAAGCTTCAAGCGTACATTGAAGAATTGGTTCCAAATGTGCGGACGCGTTCGATGGTCG
ACACGGGTGAGCTCGTCGACCGTGCCGTCGCAGAACGTGCTGGGATTGGATTTAGTGGGAAAAACTGCTCCATCATCTCA
CCTGAGAAGGGATCGTACTTATATTTGGGGGAAATGATTTTAGATGTTTACTTACCACCGGATGAAGCGATTGAAGACGG
ATGTGGGGATTGCGATAAATGTATGACAGCTTGTCCGACGACGGCCCTTGTTGAGCCAGGTGTCCTCGATGCGAAGCGCT
GTATCGCCTATCTCACGCAGATGAAGACGTTGATGCCACGAGAGTTTCGATCGAAGCTTGGTGGTCGATTATATGGATGT
GACACGTGTCAGCAAGTCTGTCCATATAACCGCAAAAAGGACTGGCGCCACCACGAAGAACTGTTGCCGGAAGCTGAGAT
CGTCAAACCGCTCTTAGAGCCTCTTCTGACATTGAGCAACCGGGAGTTCAAACAAAAGTTCGGACATTTATCGGGCGCAT
GGCGCGGGAAGAAACCGATTCAACGAAATGCGATTTTAGCACTCGCGCACTACCGTGAGCCTTCAGCGATTCCAATCTTA
CGGGAATTCATCAAACAGGATGAACGCGAAGACATGCGCGCGACGGCTGTTTGGGCAATCGGTGCGATTCTTGGACCTGA
GGCCGATTCGATATTTGAAGAGATTGAACGGAATGAAACGTCTGACATGGTTCATGAAGAGATTCGTATCTATCGAGAGG
AGTGGGCACATGAAGATCGTGTCGTCTAA

Upstream 100 bases:

>100_bases
CTGATGACGAGAGTTCGATTCTCTTCACCCGCTTCACATCTCTCTGCCGAGTGGCGGAGAGATTTTTTGTATGCGAAAAT
ATATAGAGGAGGTGAACGGA

Downstream 100 bases:

>100_bases
ATGGGGACCGTTAGCGTATGAATTAAACGCAGCAAACAAACTGACGGCTCTTGAGTTCACAACACATGAGCCGACTGACG
AGGCACCTGAGTGGTTGCAA

Product: iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MDPYTLKQQILAYAETIGIDELKVTTADPFIVMKQRLIRQQEKGFASGFEEPDLEKRTNPELLLEEAQSIIAIAIAYPSK
LKDAPRSVAGERRGLFARASWGLDYHRAVGNRLEKLQAYIEELVPNVRTRSMVDTGELVDRAVAERAGIGFSGKNCSIIS
PEKGSYLYLGEMILDVYLPPDEAIEDGCGDCDKCMTACPTTALVEPGVLDAKRCIAYLTQMKTLMPREFRSKLGGRLYGC
DTCQQVCPYNRKKDWRHHEELLPEAEIVKPLLEPLLTLSNREFKQKFGHLSGAWRGKKPIQRNAILALAHYREPSAIPIL
REFIKQDEREDMRATAVWAIGAILGPEADSIFEEIERNETSDMVHEEIRIYREEWAHEDRVV

Sequences:

>Translated_382_residues
MDPYTLKQQILAYAETIGIDELKVTTADPFIVMKQRLIRQQEKGFASGFEEPDLEKRTNPELLLEEAQSIIAIAIAYPSK
LKDAPRSVAGERRGLFARASWGLDYHRAVGNRLEKLQAYIEELVPNVRTRSMVDTGELVDRAVAERAGIGFSGKNCSIIS
PEKGSYLYLGEMILDVYLPPDEAIEDGCGDCDKCMTACPTTALVEPGVLDAKRCIAYLTQMKTLMPREFRSKLGGRLYGC
DTCQQVCPYNRKKDWRHHEELLPEAEIVKPLLEPLLTLSNREFKQKFGHLSGAWRGKKPIQRNAILALAHYREPSAIPIL
REFIKQDEREDMRATAVWAIGAILGPEADSIFEEIERNETSDMVHEEIRIYREEWAHEDRVV
>Mature_382_residues
MDPYTLKQQILAYAETIGIDELKVTTADPFIVMKQRLIRQQEKGFASGFEEPDLEKRTNPELLLEEAQSIIAIAIAYPSK
LKDAPRSVAGERRGLFARASWGLDYHRAVGNRLEKLQAYIEELVPNVRTRSMVDTGELVDRAVAERAGIGFSGKNCSIIS
PEKGSYLYLGEMILDVYLPPDEAIEDGCGDCDKCMTACPTTALVEPGVLDAKRCIAYLTQMKTLMPREFRSKLGGRLYGC
DTCQQVCPYNRKKDWRHHEELLPEAEIVKPLLEPLLTLSNREFKQKFGHLSGAWRGKKPIQRNAILALAHYREPSAIPIL
REFIKQDEREDMRATAVWAIGAILGPEADSIFEEIERNETSDMVHEEIRIYREEWAHEDRVV

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=304, Percent_Identity=32.5657894736842, Blast_Score=179, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 43382; Mature: 43382

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPYTLKQQILAYAETIGIDELKVTTADPFIVMKQRLIRQQEKGFASGFEEPDLEKRTNP
CCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
ELLLEEAQSIIAIAIAYPSKLKDAPRSVAGERRGLFARASWGLDYHRAVGNRLEKLQAYI
HHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHHHH
EELVPNVRTRSMVDTGELVDRAVAERAGIGFSGKNCSIISPEKGSYLYLGEMILDVYLPP
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEHHHHHHHHCCCC
DEAIEDGCGDCDKCMTACPTTALVEPGVLDAKRCIAYLTQMKTLMPREFRSKLGGRLYGC
HHHHHCCCCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCEEECC
DTCQQVCPYNRKKDWRHHEELLPEAEIVKPLLEPLLTLSNREFKQKFGHLSGAWRGKKPI
HHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC
QRNAILALAHYREPSAIPILREFIKQDEREDMRATAVWAIGAILGPEADSIFEEIERNET
HHHHHEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCH
SDMVHEEIRIYREEWAHEDRVV
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDPYTLKQQILAYAETIGIDELKVTTADPFIVMKQRLIRQQEKGFASGFEEPDLEKRTNP
CCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
ELLLEEAQSIIAIAIAYPSKLKDAPRSVAGERRGLFARASWGLDYHRAVGNRLEKLQAYI
HHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHHHH
EELVPNVRTRSMVDTGELVDRAVAERAGIGFSGKNCSIISPEKGSYLYLGEMILDVYLPP
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEHHHHHHHHCCCC
DEAIEDGCGDCDKCMTACPTTALVEPGVLDAKRCIAYLTQMKTLMPREFRSKLGGRLYGC
HHHHHCCCCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCEEECC
DTCQQVCPYNRKKDWRHHEELLPEAEIVKPLLEPLLTLSNREFKQKFGHLSGAWRGKKPI
HHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC
QRNAILALAHYREPSAIPILREFIKQDEREDMRATAVWAIGAILGPEADSIFEEIERNET
HHHHHEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCH
SDMVHEEIRIYREEWAHEDRVV
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]