| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is pstS [H]
Identifier: 229918144
GI number: 229918144
Start: 2374171
End: 2375343
Strand: Direct
Name: pstS [H]
Synonym: EAT1b_2424
Alternate gene names: 229918144
Gene position: 2374171-2375343 (Clockwise)
Preceding gene: 229918143
Following gene: 229918145
Centisome position: 79.14
GC content: 46.55
Gene sequence:
>1173_bases ATGAAACTATTGAAATTTAGTGTGGGAACCGTTTTTATTTTATTTGTCACGATTGTGATTTCTGTCTTCGTCGCCCTTTT TACGATGGGAGACCCCATCACACTCGGGCGACCGATTCTTTGGACGATATGGTATATGGCCGTTCTACTAATCGTATGTA TGGGACTCTATGATTTCTCGTCCTTTTCAAAACAAAAGATTCGAAAAGTTCTCGGCTGGGGTACGTTGGTCGGTGTTCTC CTCTTCGCTTCTGTGAAAGGATATTATATGTATCAGGATAGCTTGAAGATTGAGGAACGCGGAGTGGAGTTGACGGACTA TCAGCCGTTCACGGATTCAGGACAATTGGCGAGACTCGATCACGAGGCTTCGGTGAAGTTTGGGGAAGGGTTGCCGCGAT TAGACGGAGCGACGGCGCTCTATCCGATGTACGCTTCATTCGTAGAAGCAGTCTATCCGGACTCGGAAACGTATGATCCA TACAATGATCAAACGAGTAAAGTCGTGTCGACGACAACGCCGGAAGCATACAGCCGACTAATGAACGATCAGACTGACGT GATTTTTGTCGCGGGTCCATCTGACCGTCAATTGAAGGTCGCGAAACAAAAAAACGTTTCTCTACATATGACGCCGATTG GAAGGGAAGCATTTGTTTTCTTCGTCCATGAAGATAACCCGGTCGATTCGTTGACGATGGAACAAGTCCGGGGGATTTAT TCAGGCGACATTCGGAATTGGGAAGAGGTCGGCGGCAACTCGGAAGCCGTTCGAGCTTTCCAACGTCCTGAGGATAGCGG CAGTCAAACGGCGTTACAAAAGATGATGGGCGAACAAAAGCTCATGGAGGCGCCGGTAGAAGATGTTCCTGAAGGGATGG GTGGAATCATCCAACAAACTTCATCGTATCGAAACCATAAAAATGCGATTGGATTCTCATTTAGATACTATGCGACAGAA ATGGTGAAGGACCATAAAATCAAGTTACTTCGTATAGAAGGAATTGAGCCGACCGTTGAAACGATTCAGGATGGATCGTA TCCACTGACGTCTGAATTCTATGCGGTGACTACGGATGAGAAAGCAAAGCAATATGAAGATTTTCTTCAATGGCTCGAAA GCGAGGATGGGCAGACGTTAGTGGAGAAGACGGGCTATGTTCGTCTCGATTAA
Upstream 100 bases:
>100_bases TACGGTCACGAGACCGACAAAAGGAGTCGGGGTAGAAGCAGTGCTTTATGAGATTGCTTAACTTCCCTTTCCTAGGAACA ACGAGGAGAAAATCAGTTAT
Downstream 100 bases:
>100_bases TACAAAACAAAAGGTTTACTTCTCGTCATGTTGACGGGAAGTAAATCTTTTTTTAATTTTTATTGTTTTTTGTATTGACG AAGTGGTAAATAGAGATTAT
Product: phosphate ABC transporter periplasmic protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKLLKFSVGTVFILFVTIVISVFVALFTMGDPITLGRPILWTIWYMAVLLIVCMGLYDFSSFSKQKIRKVLGWGTLVGVL LFASVKGYYMYQDSLKIEERGVELTDYQPFTDSGQLARLDHEASVKFGEGLPRLDGATALYPMYASFVEAVYPDSETYDP YNDQTSKVVSTTTPEAYSRLMNDQTDVIFVAGPSDRQLKVAKQKNVSLHMTPIGREAFVFFVHEDNPVDSLTMEQVRGIY SGDIRNWEEVGGNSEAVRAFQRPEDSGSQTALQKMMGEQKLMEAPVEDVPEGMGGIIQQTSSYRNHKNAIGFSFRYYATE MVKDHKIKLLRIEGIEPTVETIQDGSYPLTSEFYAVTTDEKAKQYEDFLQWLESEDGQTLVEKTGYVRLD
Sequences:
>Translated_390_residues MKLLKFSVGTVFILFVTIVISVFVALFTMGDPITLGRPILWTIWYMAVLLIVCMGLYDFSSFSKQKIRKVLGWGTLVGVL LFASVKGYYMYQDSLKIEERGVELTDYQPFTDSGQLARLDHEASVKFGEGLPRLDGATALYPMYASFVEAVYPDSETYDP YNDQTSKVVSTTTPEAYSRLMNDQTDVIFVAGPSDRQLKVAKQKNVSLHMTPIGREAFVFFVHEDNPVDSLTMEQVRGIY SGDIRNWEEVGGNSEAVRAFQRPEDSGSQTALQKMMGEQKLMEAPVEDVPEGMGGIIQQTSSYRNHKNAIGFSFRYYATE MVKDHKIKLLRIEGIEPTVETIQDGSYPLTSEFYAVTTDEKAKQYEDFLQWLESEDGQTLVEKTGYVRLD >Mature_390_residues MKLLKFSVGTVFILFVTIVISVFVALFTMGDPITLGRPILWTIWYMAVLLIVCMGLYDFSSFSKQKIRKVLGWGTLVGVL LFASVKGYYMYQDSLKIEERGVELTDYQPFTDSGQLARLDHEASVKFGEGLPRLDGATALYPMYASFVEAVYPDSETYDP YNDQTSKVVSTTTPEAYSRLMNDQTDVIFVAGPSDRQLKVAKQKNVSLHMTPIGREAFVFFVHEDNPVDSLTMEQVRGIY SGDIRNWEEVGGNSEAVRAFQRPEDSGSQTALQKMMGEQKLMEAPVEDVPEGMGGIIQQTSSYRNHKNAIGFSFRYYATE MVKDHKIKLLRIEGIEPTVETIQDGSYPLTSEFYAVTTDEKAKQYEDFLQWLESEDGQTLVEKTGYVRLD
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44076; Mature: 44076
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKFSVGTVFILFVTIVISVFVALFTMGDPITLGRPILWTIWYMAVLLIVCMGLYDFS CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SFSKQKIRKVLGWGTLVGVLLFASVKGYYMYQDSLKIEERGVELTDYQPFTDSGQLARLD HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHCCCEEECCCCCCCCCCEEECC HEASVKFGEGLPRLDGATALYPMYASFVEAVYPDSETYDPYNDQTSKVVSTTTPEAYSRL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHH MNDQTDVIFVAGPSDRQLKVAKQKNVSLHMTPIGREAFVFFVHEDNPVDSLTMEQVRGIY HCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHH SGDIRNWEEVGGNSEAVRAFQRPEDSGSQTALQKMMGEQKLMEAPVEDVPEGMGGIIQQT CCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SSYRNHKNAIGFSFRYYATEMVKDHKIKLLRIEGIEPTVETIQDGSYPLTSEFYAVTTDE HHHHCCCCCCCEEHHHHHHHHHHCCCEEEEEEECCCHHHHHHCCCCCCCCCCEEEEECCH KAKQYEDFLQWLESEDGQTLVEKTGYVRLD HHHHHHHHHHHHHCCCCCCHHHCCCCEECC >Mature Secondary Structure MKLLKFSVGTVFILFVTIVISVFVALFTMGDPITLGRPILWTIWYMAVLLIVCMGLYDFS CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SFSKQKIRKVLGWGTLVGVLLFASVKGYYMYQDSLKIEERGVELTDYQPFTDSGQLARLD HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHCCCEEECCCCCCCCCCEEECC HEASVKFGEGLPRLDGATALYPMYASFVEAVYPDSETYDPYNDQTSKVVSTTTPEAYSRL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHH MNDQTDVIFVAGPSDRQLKVAKQKNVSLHMTPIGREAFVFFVHEDNPVDSLTMEQVRGIY HCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHH SGDIRNWEEVGGNSEAVRAFQRPEDSGSQTALQKMMGEQKLMEAPVEDVPEGMGGIIQQT CCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SSYRNHKNAIGFSFRYYATEMVKDHKIKLLRIEGIEPTVETIQDGSYPLTSEFYAVTTDE HHHHCCCCCCCEEHHHHHHHHHHCCCEEEEEEECCCHHHHHHCCCCCCCCCCEEEEECCH KAKQYEDFLQWLESEDGQTLVEKTGYVRLD HHHHHHHHHHHHHCCCCCCHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA