| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is asd [H]
Identifier: 229917982
GI number: 229917982
Start: 2215453
End: 2216448
Strand: Direct
Name: asd [H]
Synonym: EAT1b_2261
Alternate gene names: 229917982
Gene position: 2215453-2216448 (Clockwise)
Preceding gene: 229917981
Following gene: 229917983
Centisome position: 73.85
GC content: 51.0
Gene sequence:
>996_bases ATGTATAACGTAGCAGTCGTCGGTGCAACAGGTGCCGTCGGACAAAAAATGATTGACGTCTTAACGGAATATGAATTTCC AATCAGCGAACTGAGACTCTACGCTTCAGCCCGCTCAGCAGGAAAGACGGTCGAGGTAAATGGGCAATCGGTCGTGATTC GTGAATTGACCGATGCGATTTATGCGGACCCGATCGATATCGCACTCTTCTCTGCTGGTGGCAGCATTAGTGAGCAATAC GCCCCACGGTTGAGCGAGCAAGGAGTCATCGTCATCGATAATTCAAGCGCATTCCGAATGCAAGAAGGAATTCCACTCAT CGTACCGGAAGTGAACCGAGTCGAACTCAGTCCGGAAAAGACGCTCATCGCGAACCCGAACTGTTCCACGATTCAATCGG TCGTGGCGCTCGCACCTCTAGCGGAAGTATACGGACTGACACGCGTCGCCTATACATCGTATCAAGCAGTATCGGGATCC GGTCAAAAAGGGATTGATGACCTCGAGCGCGGTGCGCGCGGAGAAGAACCGACGAATTATCCCTATCCGATTTATGATAA CGTGTTGCCGCACATCGATGTATTTTTAGAAAATGGCTACACAAAAGAAGAACAAAAGATGATGGATGAGACACGTAAGA TTTTAAATGCGCCAAACCTCGGGGTGACGGCCACTTGTGTCCGGGTGCCGGTACGAAACAGTCATGCGGTATCGATCACG GTGACGCTCGAACGGGATGCGACGGTCGCAGAAGTGAAAGCCGTCCTCGCCGATGCACCAGGAATCGTGTTGATGGACAA TCCATCTGAACTGGCCTACCCGACACCTCTCGATGCGAACGGAACGGATGAGGTGTATGTCGGACGAATTCGCCGAGACG ATTCACAATCGAATACGTTCCATCTTTGGTGCGTTGCAGATAACGTCCGAAAAGGAGCGGCCGCGAATGCCGTTCAAATC GCACAATGTATGATTAGTCAAACAGCGACGAAATAA
Upstream 100 bases:
>100_bases GACATCAGAAATCAGTATTTCCTATACGATTCAAGAACAAGATGTGGAAGCGGCAGTCGCAGCCATTGCGGCCCGGTTCA ACTTATAAGGAGGTAGCACG
Downstream 100 bases:
>100_bases GGAGGAGATGACATGTTCACAGGAGTGGCGACAGCATTAGCTACCCCGTTTCAAGAAAATGGGCAGTTGAATCTAGAAGC ATGGGCAGCATTAATTGAAG
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MYNVAVVGATGAVGQKMIDVLTEYEFPISELRLYASARSAGKTVEVNGQSVVIRELTDAIYADPIDIALFSAGGSISEQY APRLSEQGVIVIDNSSAFRMQEGIPLIVPEVNRVELSPEKTLIANPNCSTIQSVVALAPLAEVYGLTRVAYTSYQAVSGS GQKGIDDLERGARGEEPTNYPYPIYDNVLPHIDVFLENGYTKEEQKMMDETRKILNAPNLGVTATCVRVPVRNSHAVSIT VTLERDATVAEVKAVLADAPGIVLMDNPSELAYPTPLDANGTDEVYVGRIRRDDSQSNTFHLWCVADNVRKGAAANAVQI AQCMISQTATK
Sequences:
>Translated_331_residues MYNVAVVGATGAVGQKMIDVLTEYEFPISELRLYASARSAGKTVEVNGQSVVIRELTDAIYADPIDIALFSAGGSISEQY APRLSEQGVIVIDNSSAFRMQEGIPLIVPEVNRVELSPEKTLIANPNCSTIQSVVALAPLAEVYGLTRVAYTSYQAVSGS GQKGIDDLERGARGEEPTNYPYPIYDNVLPHIDVFLENGYTKEEQKMMDETRKILNAPNLGVTATCVRVPVRNSHAVSIT VTLERDATVAEVKAVLADAPGIVLMDNPSELAYPTPLDANGTDEVYVGRIRRDDSQSNTFHLWCVADNVRKGAAANAVQI AQCMISQTATK >Mature_331_residues MYNVAVVGATGAVGQKMIDVLTEYEFPISELRLYASARSAGKTVEVNGQSVVIRELTDAIYADPIDIALFSAGGSISEQY APRLSEQGVIVIDNSSAFRMQEGIPLIVPEVNRVELSPEKTLIANPNCSTIQSVVALAPLAEVYGLTRVAYTSYQAVSGS GQKGIDDLERGARGEEPTNYPYPIYDNVLPHIDVFLENGYTKEEQKMMDETRKILNAPNLGVTATCVRVPVRNSHAVSIT VTLERDATVAEVKAVLADAPGIVLMDNPSELAYPTPLDANGTDEVYVGRIRRDDSQSNTFHLWCVADNVRKGAAANAVQI AQCMISQTATK
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=336, Percent_Identity=31.8452380952381, Blast_Score=168, Evalue=5e-43, Organism=Escherichia coli, GI1789841, Length=360, Percent_Identity=25.8333333333333, Blast_Score=96, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6320362, Length=388, Percent_Identity=29.639175257732, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 35756; Mature: 35756
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNVAVVGATGAVGQKMIDVLTEYEFPISELRLYASARSAGKTVEVNGQSVVIRELTDAI CCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCEEEHHHHHHHH YADPIDIALFSAGGSISEQYAPRLSEQGVIVIDNSSAFRMQEGIPLIVPEVNRVELSPEK HCCCCEEEEEECCCCCCHHHCCCCCCCCEEEEECCCCEEHHCCCEEEECCCCEEEECCCC TLIANPNCSTIQSVVALAPLAEVYGLTRVAYTSYQAVSGSGQKGIDDLERGARGEEPTNY EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCCCCCC PYPIYDNVLPHIDVFLENGYTKEEQKMMDETRKILNAPNLGVTATCVRVPVRNSHAVSIT CCCCHHCCCHHEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEE VTLERDATVAEVKAVLADAPGIVLMDNPSELAYPTPLDANGTDEVYVGRIRRDDSQSNTF EEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCE HLWCVADNVRKGAAANAVQIAQCMISQTATK EEEEEECCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MYNVAVVGATGAVGQKMIDVLTEYEFPISELRLYASARSAGKTVEVNGQSVVIRELTDAI CCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCEEEHHHHHHHH YADPIDIALFSAGGSISEQYAPRLSEQGVIVIDNSSAFRMQEGIPLIVPEVNRVELSPEK HCCCCEEEEEECCCCCCHHHCCCCCCCCEEEEECCCCEEHHCCCEEEECCCCEEEECCCC TLIANPNCSTIQSVVALAPLAEVYGLTRVAYTSYQAVSGSGQKGIDDLERGARGEEPTNY EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCCCCCC PYPIYDNVLPHIDVFLENGYTKEEQKMMDETRKILNAPNLGVTATCVRVPVRNSHAVSIT CCCCHHCCCHHEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEE VTLERDATVAEVKAVLADAPGIVLMDNPSELAYPTPLDANGTDEVYVGRIRRDDSQSNTF EEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCE HLWCVADNVRKGAAANAVQIAQCMISQTATK EEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]