| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is purH [H]
Identifier: 229917954
GI number: 229917954
Start: 2180595
End: 2182115
Strand: Direct
Name: purH [H]
Synonym: EAT1b_2233
Alternate gene names: 229917954
Gene position: 2180595-2182115 (Clockwise)
Preceding gene: 229917953
Following gene: 229917955
Centisome position: 72.69
GC content: 52.66
Gene sequence:
>1521_bases GTGAGAGCATTATTAAGTGTTTCTGATAAAACGGGAATTGTCGAACTCGCGACCGTCTTGCATGAGGCGGGCATCGAGCT CATTTCAACAGGTGGGACCGAGGCTGCGCTTCAGCAGGCGGGATTGCCAGTCAAGAACATTTCGGAAGTGACATCGTTCC CTGAAATGTTAGACGGCCGTGTCAAAACGTTGCACCCACTCGTTCACGGGGGCTTGCTCGGACGTCGCGACCTCGATACG CATGTCGCACAAATGAAAGATCATCACATCGAACCAATCGATTATGTCGTGGTCAATCTGTATCCGTTCAAGGAGACGAT TGCGAAAGAGAATACGACATACGAAGAAGCGATTGAAAACATTGATATTGGTGGACCGAGCATGTTGCGTTCGGCTGCGA AAAACCATGCGAGTGTCACCGTCGTCGTGGACCCGAGTGATTATACACTCGTCGCCGAGGAAGTACGTGGAGGCGGTACA TCGTTTGAAACACGTCAACGTCTCGCGACGAAAGCGTTCCGACATACGGCTGCCTATGACGCGTTGATTGCCGACTACTT AGGTCGTCAAATCGGCGAAACGTTCCCAGAGCAGTTGACGGTCACGTATGAAAAAGTTCAAGACCTTCGTTACGGAGAGA ACCCACACCAACAAGCGGCGTTTTATAAGACACCGTTATATGACGGGATGACACTTGCGAAGGCGACACAGCTTCACGGG AAAGAGCTCTCGTATAACAACATTCAAGATACGAATGCAGCCCTTGAAGCACTCAGTGAATTGACTGAGCCGGCGGCAGT CGTCGTCAAGCACATGAACCCGTGCGGCGTTGCAGTCGGACGGACGATTTCTCAAGCGTTCGAACGTGCCCATGCGGCCG ACCCGGTCTCCATCTTTGGTGGAATCGTCGCCTTAAACCGTGAAGTCGATCTTGAGACGGCAGATGCCCTTCGCAACATC TTTTTAGAGATCATCATTGCCCCATCCTTTAGTGAGGCAGCACTTGACCGATTGAAAGAGAAAAAGAATCTTCGGTTGTT GACGTTAGATATGGGACAGATGACAGGCATGCGCCTTACGGCTGTCGCCGGAGGATTGCTCGTACAAGACGGGGATGACA TGACACTCGATGATGCCTCATGCCAAATCGTGACGGATCGTCGCCCGACAGCAGCGGAATGGGAAGACTTGAAACTTGCA TGGCGTGTCGTCAAGCACGTCAAATCGAACGCGATTGTCGTCGCAAAAGACGAGACGACGATTGGAATCGGTGCCGGACA GATGAACCGCGTCGGTGCAGCGAAAATCGCTTTTGAACAAGCCGGGGAACGCGCGTCAGGCGCGGCTCTCGGAAGTGATG CCTTCTTCCCGATGGCAGATACGGTCGAAGCGGCAGCGGCTGCAGGAATCACGGCCATCATCCAACCGGGTGGGTCGATT CGCGATGCCGAATCGATTGAAGCGGCAAATCGCCATGGCATCACGATGGTATTCACATCAGTCAGACATTTCAAACACTG A
Upstream 100 bases:
>100_bases GGTGTGACCGCACCGAGGCGACGCGTCGCATTCAGACGATCGAGCACCAACTGTATCCGCGCGTATTACAACAAGTGTTG AATCAACAGGAGGTTTTCAA
Downstream 100 bases:
>100_bases GAGGGGTTTGCGTCATGAACGTATTGGTCATCGGTCGAGGAGGGCGCGAGCATGCGCTCGCATGGAAGTTGAAACAAGAC GGGCATCACGTCTTCGTTGC
Product: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MRALLSVSDKTGIVELATVLHEAGIELISTGGTEAALQQAGLPVKNISEVTSFPEMLDGRVKTLHPLVHGGLLGRRDLDT HVAQMKDHHIEPIDYVVVNLYPFKETIAKENTTYEEAIENIDIGGPSMLRSAAKNHASVTVVVDPSDYTLVAEEVRGGGT SFETRQRLATKAFRHTAAYDALIADYLGRQIGETFPEQLTVTYEKVQDLRYGENPHQQAAFYKTPLYDGMTLAKATQLHG KELSYNNIQDTNAALEALSELTEPAAVVVKHMNPCGVAVGRTISQAFERAHAADPVSIFGGIVALNREVDLETADALRNI FLEIIIAPSFSEAALDRLKEKKNLRLLTLDMGQMTGMRLTAVAGGLLVQDGDDMTLDDASCQIVTDRRPTAAEWEDLKLA WRVVKHVKSNAIVVAKDETTIGIGAGQMNRVGAAKIAFEQAGERASGAALGSDAFFPMADTVEAAAAAGITAIIQPGGSI RDAESIEAANRHGITMVFTSVRHFKH
Sequences:
>Translated_506_residues MRALLSVSDKTGIVELATVLHEAGIELISTGGTEAALQQAGLPVKNISEVTSFPEMLDGRVKTLHPLVHGGLLGRRDLDT HVAQMKDHHIEPIDYVVVNLYPFKETIAKENTTYEEAIENIDIGGPSMLRSAAKNHASVTVVVDPSDYTLVAEEVRGGGT SFETRQRLATKAFRHTAAYDALIADYLGRQIGETFPEQLTVTYEKVQDLRYGENPHQQAAFYKTPLYDGMTLAKATQLHG KELSYNNIQDTNAALEALSELTEPAAVVVKHMNPCGVAVGRTISQAFERAHAADPVSIFGGIVALNREVDLETADALRNI FLEIIIAPSFSEAALDRLKEKKNLRLLTLDMGQMTGMRLTAVAGGLLVQDGDDMTLDDASCQIVTDRRPTAAEWEDLKLA WRVVKHVKSNAIVVAKDETTIGIGAGQMNRVGAAKIAFEQAGERASGAALGSDAFFPMADTVEAAAAAGITAIIQPGGSI RDAESIEAANRHGITMVFTSVRHFKH >Mature_506_residues MRALLSVSDKTGIVELATVLHEAGIELISTGGTEAALQQAGLPVKNISEVTSFPEMLDGRVKTLHPLVHGGLLGRRDLDT HVAQMKDHHIEPIDYVVVNLYPFKETIAKENTTYEEAIENIDIGGPSMLRSAAKNHASVTVVVDPSDYTLVAEEVRGGGT SFETRQRLATKAFRHTAAYDALIADYLGRQIGETFPEQLTVTYEKVQDLRYGENPHQQAAFYKTPLYDGMTLAKATQLHG KELSYNNIQDTNAALEALSELTEPAAVVVKHMNPCGVAVGRTISQAFERAHAADPVSIFGGIVALNREVDLETADALRNI FLEIIIAPSFSEAALDRLKEKKNLRLLTLDMGQMTGMRLTAVAGGLLVQDGDDMTLDDASCQIVTDRRPTAAEWEDLKLA WRVVKHVKSNAIVVAKDETTIGIGAGQMNRVGAAKIAFEQAGERASGAALGSDAFFPMADTVEAAAAAGITAIIQPGGSI RDAESIEAANRHGITMVFTSVRHFKH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=472, Percent_Identity=40.0423728813559, Blast_Score=279, Evalue=5e-75, Organism=Escherichia coli, GI1790439, Length=523, Percent_Identity=54.1108986615679, Blast_Score=536, Evalue=1e-153, Organism=Caenorhabditis elegans, GI71985564, Length=470, Percent_Identity=34.8936170212766, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI71985574, Length=306, Percent_Identity=27.4509803921569, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323768, Length=468, Percent_Identity=37.3931623931624, Blast_Score=280, Evalue=5e-76, Organism=Saccharomyces cerevisiae, GI6323056, Length=468, Percent_Identity=37.1794871794872, Blast_Score=278, Evalue=2e-75, Organism=Drosophila melanogaster, GI24649832, Length=469, Percent_Identity=38.8059701492537, Blast_Score=275, Evalue=4e-74,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 54621; Mature: 54621
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALLSVSDKTGIVELATVLHEAGIELISTGGTEAALQQAGLPVKNISEVTSFPEMLDGR CCCEEECCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHCCH VKTLHPLVHGGLLGRRDLDTHVAQMKDHHIEPIDYVVVNLYPFKETIAKENTTYEEAIEN HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHCCCCCHHHHHHH IDIGGPSMLRSAAKNHASVTVVVDPSDYTLVAEEVRGGGTSFETRQRLATKAFRHTAAYD CCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHH ALIADYLGRQIGETFPEQLTVTYEKVQDLRYGENPHQQAAFYKTPLYDGMTLAKATQLHG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHEEECCCCCCCHHHHHHHHCC KELSYNNIQDTNAALEALSELTEPAAVVVKHMNPCGVAVGRTISQAFERAHAADPVSIFG CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH GIVALNREVDLETADALRNIFLEIIIAPSFSEAALDRLKEKKNLRLLTLDMGQMTGMRLT HHHEECCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEE AVAGGLLVQDGDDMTLDDASCQIVTDRRPTAAEWEDLKLAWRVVKHVKSNAIVVAKDETT HECCCEEEECCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCE IGIGAGQMNRVGAAKIAFEQAGERASGAALGSDAFFPMADTVEAAAAAGITAIIQPGGSI EEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCC RDAESIEAANRHGITMVFTSVRHFKH CCHHHHHHHCCCCEEEEEHHHHHHCC >Mature Secondary Structure MRALLSVSDKTGIVELATVLHEAGIELISTGGTEAALQQAGLPVKNISEVTSFPEMLDGR CCCEEECCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHCCH VKTLHPLVHGGLLGRRDLDTHVAQMKDHHIEPIDYVVVNLYPFKETIAKENTTYEEAIEN HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHCCCCCHHHHHHH IDIGGPSMLRSAAKNHASVTVVVDPSDYTLVAEEVRGGGTSFETRQRLATKAFRHTAAYD CCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHH ALIADYLGRQIGETFPEQLTVTYEKVQDLRYGENPHQQAAFYKTPLYDGMTLAKATQLHG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHEEECCCCCCCHHHHHHHHCC KELSYNNIQDTNAALEALSELTEPAAVVVKHMNPCGVAVGRTISQAFERAHAADPVSIFG CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH GIVALNREVDLETADALRNIFLEIIIAPSFSEAALDRLKEKKNLRLLTLDMGQMTGMRLT HHHEECCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEE AVAGGLLVQDGDDMTLDDASCQIVTDRRPTAAEWEDLKLAWRVVKHVKSNAIVVAKDETT HECCCEEEECCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCE IGIGAGQMNRVGAAKIAFEQAGERASGAALGSDAFFPMADTVEAAAAAGITAIIQPGGSI EEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCC RDAESIEAANRHGITMVFTSVRHFKH CCHHHHHHHCCCCEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]