| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917902
Identifier: 229917902
GI number: 229917902
Start: 2117048
End: 2118349
Strand: Direct
Name: 229917902
Synonym: EAT1b_2180
Alternate gene names: NA
Gene position: 2117048-2118349 (Clockwise)
Preceding gene: 229917901
Following gene: 229917903
Centisome position: 70.57
GC content: 46.39
Gene sequence:
>1302_bases ATGCGTAAATTAGTCAGCTTACTTACACTCGGAGCACTTTCAGTTGGCGTCTTGAGCGGCTGCTCAGACAGCGAAGGCGG AGCTTCTGAATCAAAAGATGACGTCTTAAAAGTTTGGTCATTTACGGACGAATTAAAAGAACCAATTAAAACTTATGAAG AGAAGAACGGTGTCAAAGTTGAATTGACTATCGTCCCGATCGCGGACTATCCAACGAAATTGAAGCCAGCACTTGAGAGT GGCGTTGGCGCACCGGACGTCTTCACGGGAGAAATCGCATTCCTTAAACAATGGGTTGATGCAGGTTATTGGGAAAACCT TTCGGACGAGCCATACAGTGTCGATGAAATCGCAGACAACTACGTCCCGTACGTGTTTGACCTCGGGAAAGATAAAGATG GAAACGTTCGCGCTCTTTCATGGCAAACGACACCAGGTGGCGTTTACTACAAACGTAGCTTAGCAAAAGAAGTACTTGGT ACAGACGACCCGACTGAAATCGGCGAAATGATGAGTTCGATGGACGGCGTCTTCGAAGTTGCTGAGAAGATGAAACAAAA AGGATACAAGATGTTCCCAGACGAAGGTGCGATCCGTTGGTTCTCACAAGGAGCAAACCCAGAAGCGTGGGTCAACGATA AAAACGAACTCGTCTTGACAGAAGATAAGATCAACTACATGGACTATGCGAAAGAACTTCGTGAGAAGCAATACACTGCG CTCGCACCAGAATGGTCACCATCATGGTTCGAAGGAATGGATAAGCCAATCAAAGTGAAAGAGAACGGAAAAGAGACAGA GACACAAGTCTTCTCATACGTCCTCCCAACATGGGGTCTCCACTCTGTATTAAAAGAGAACGCGAAACAGACTGCAGGTG ACTGGGCTGTCACAAGCGGACCAAGCCCATACTTCTGGGGCGGTACATGGCTCGGAGTCTATGAAGGATCGAAAAACAAA GAAGCCGCTTACGACTTCGTAAAACTCATGACACAGGATGAAGAATTCTTGACAGAGTGGGCACAAGAGACAGGCGACGT ACTTGCGTTCAACCCGGTCACAGACAAGATCAAAGACGACTTCAGCGATGAGTTCCTCGGCGGACAAAACAACTATGAGT TCTTCCTCGATGAAGCAGATGAAATCACACCAGGTATCGTCACGAAATACGACCAACAGCTCGATACACTTTATGGTGCA TCTGTCCTTCAGTATGTAGAAGGGAAAAAGTCAAAAGAAGAAGCGATTGAAGAGTTCAAAAAACAAGCGAAGAACGCTTA TCCAGACATCGTTGTAGACTGA
Upstream 100 bases:
>100_bases GATATTTTATTTCAACTAAACCGAAAGCGCTTTCGATAATTTTAAACCTCTTTTTGCAAGCGCTTTCTACTATTACTTAT AAAAAGGATGGGAACAACAC
Downstream 100 bases:
>100_bases CGATGACCAACACGAGGGGGGAGCTCCCCCCTCGGTTCTTATGGAAGGAGAAATACACGTGAAAAAACTAGATCGTTACG GCTATCTGTTCATCGCCCCG
Product: extracellular solute-binding protein family 1
Products: NA
Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component; Sugar Transport System
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MRKLVSLLTLGALSVGVLSGCSDSEGGASESKDDVLKVWSFTDELKEPIKTYEEKNGVKVELTIVPIADYPTKLKPALES GVGAPDVFTGEIAFLKQWVDAGYWENLSDEPYSVDEIADNYVPYVFDLGKDKDGNVRALSWQTTPGGVYYKRSLAKEVLG TDDPTEIGEMMSSMDGVFEVAEKMKQKGYKMFPDEGAIRWFSQGANPEAWVNDKNELVLTEDKINYMDYAKELREKQYTA LAPEWSPSWFEGMDKPIKVKENGKETETQVFSYVLPTWGLHSVLKENAKQTAGDWAVTSGPSPYFWGGTWLGVYEGSKNK EAAYDFVKLMTQDEEFLTEWAQETGDVLAFNPVTDKIKDDFSDEFLGGQNNYEFFLDEADEITPGIVTKYDQQLDTLYGA SVLQYVEGKKSKEEAIEEFKKQAKNAYPDIVVD
Sequences:
>Translated_433_residues MRKLVSLLTLGALSVGVLSGCSDSEGGASESKDDVLKVWSFTDELKEPIKTYEEKNGVKVELTIVPIADYPTKLKPALES GVGAPDVFTGEIAFLKQWVDAGYWENLSDEPYSVDEIADNYVPYVFDLGKDKDGNVRALSWQTTPGGVYYKRSLAKEVLG TDDPTEIGEMMSSMDGVFEVAEKMKQKGYKMFPDEGAIRWFSQGANPEAWVNDKNELVLTEDKINYMDYAKELREKQYTA LAPEWSPSWFEGMDKPIKVKENGKETETQVFSYVLPTWGLHSVLKENAKQTAGDWAVTSGPSPYFWGGTWLGVYEGSKNK EAAYDFVKLMTQDEEFLTEWAQETGDVLAFNPVTDKIKDDFSDEFLGGQNNYEFFLDEADEITPGIVTKYDQQLDTLYGA SVLQYVEGKKSKEEAIEEFKKQAKNAYPDIVVD >Mature_433_residues MRKLVSLLTLGALSVGVLSGCSDSEGGASESKDDVLKVWSFTDELKEPIKTYEEKNGVKVELTIVPIADYPTKLKPALES GVGAPDVFTGEIAFLKQWVDAGYWENLSDEPYSVDEIADNYVPYVFDLGKDKDGNVRALSWQTTPGGVYYKRSLAKEVLG TDDPTEIGEMMSSMDGVFEVAEKMKQKGYKMFPDEGAIRWFSQGANPEAWVNDKNELVLTEDKINYMDYAKELREKQYTA LAPEWSPSWFEGMDKPIKVKENGKETETQVFSYVLPTWGLHSVLKENAKQTAGDWAVTSGPSPYFWGGTWLGVYEGSKNK EAAYDFVKLMTQDEEFLTEWAQETGDVLAFNPVTDKIKDDFSDEFLGGQNNYEFFLDEADEITPGIVTKYDQQLDTLYGA SVLQYVEGKKSKEEAIEEFKKQAKNAYPDIVVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48639; Mature: 48639
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLVSLLTLGALSVGVLSGCSDSEGGASESKDDVLKVWSFTDELKEPIKTYEEKNGVKV CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ELTIVPIADYPTKLKPALESGVGAPDVFTGEIAFLKQWVDAGYWENLSDEPYSVDEIADN EEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCC YVPYVFDLGKDKDGNVRALSWQTTPGGVYYKRSLAKEVLGTDDPTEIGEMMSSMDGVFEV CCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AEKMKQKGYKMFPDEGAIRWFSQGANPEAWVNDKNELVLTEDKINYMDYAKELREKQYTA HHHHHHCCCEECCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH LAPEWSPSWFEGMDKPIKVKENGKETETQVFSYVLPTWGLHSVLKENAKQTAGDWAVTSG CCCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECC PSPYFWGGTWLGVYEGSKNKEAAYDFVKLMTQDEEFLTEWAQETGDVLAFNPVTDKIKDD CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCHHHHHHH FSDEFLGGQNNYEFFLDEADEITPGIVTKYDQQLDTLYGASVLQYVEGKKSKEEAIEEFK HHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KQAKNAYPDIVVD HHHHCCCCCCEEC >Mature Secondary Structure MRKLVSLLTLGALSVGVLSGCSDSEGGASESKDDVLKVWSFTDELKEPIKTYEEKNGVKV CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ELTIVPIADYPTKLKPALESGVGAPDVFTGEIAFLKQWVDAGYWENLSDEPYSVDEIADN EEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCC YVPYVFDLGKDKDGNVRALSWQTTPGGVYYKRSLAKEVLGTDDPTEIGEMMSSMDGVFEV CCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AEKMKQKGYKMFPDEGAIRWFSQGANPEAWVNDKNELVLTEDKINYMDYAKELREKQYTA HHHHHHCCCEECCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH LAPEWSPSWFEGMDKPIKVKENGKETETQVFSYVLPTWGLHSVLKENAKQTAGDWAVTSG CCCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECC PSPYFWGGTWLGVYEGSKNKEAAYDFVKLMTQDEEFLTEWAQETGDVLAFNPVTDKIKDD CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCHHHHHHH FSDEFLGGQNNYEFFLDEADEITPGIVTKYDQQLDTLYGASVLQYVEGKKSKEEAIEEFK HHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KQAKNAYPDIVVD HHHHCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA