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The map label for this gene is yabB [H]

Identifier: 229917426

GI number: 229917426

Start: 1651251

End: 1651988

Strand: Reverse

Name: yabB [H]

Synonym: EAT1b_1701

Alternate gene names: 229917426

Gene position: 1651988-1651251 (Counterclockwise)

Preceding gene: 229917427

Following gene: 229917425

Centisome position: 55.07

GC content: 47.83

Gene sequence:

>738_bases
ATGGTAACGGTTAAGGATGGAGAACGCCTTGATGATTTACTCGGACGTCCAGGTAAGATCATTCAAAGTGATGATGTGTT
CTCATTTTCATTAGATGCGGTACTGCTCGCAGAGTTTGTATGGGTACCGATCCAAAAAGGACAGCTGGTCGATTTGTGTG
CCGGTACCGGGGCAATCCCGCTCTTTTTGTCATATCGTACCAAAGGAACGATAACAGGTGTGGAGATTCAATCGAAACTG
GTTGACATGGCGAATCGAAGCATGGCGGTCAATCATCTCGAAGAGCGAATTCGAGTGGTGAAGGGCGATGTGAAAACGGC
AGCGGCGCAGCTCGGGCATGCACGATATGACGTGATCACATGTAACCCGCCCTATTTTTTAGCGAACGAGACGTCACTCC
GAAATCAAAATGAACATCATACGATTGCGCGCCATGAAGTGCTGTGCACGTTAGAAGATTGCATCAAGACGGCCAGTCAA
CTCGTCAAACCGGGAGGGAAAGTGGCGTTCGTGCATCGGCCAGAACGTTTACTGGATATCCTGACGTTGATGCGTGCGTA
TCGAATTGAACCAAAACGAATGCAACTCGTTTACCCGAAAGCGGGACGCGAGGCGAATACCTTATTAATCGAGGGATCGA
AAGATGGAAAAGCAGGTCTTAAAATTTTACCGCCATTTGTTGTCTATGAAGAAGACGATACGTATACAGAAGCGATGCGA
GCTATTCTCGATGCCTAA

Upstream 100 bases:

>100_bases
GGACTGTCTCTTCTGTTTGTCGATGCTCAATAAACATTAATATGGGGCGATAGATAGGGGTTCCCTATCCGTCGCCTTTC
TTTTATAGAAGGAGGAAACG

Downstream 100 bases:

>100_bases
ACATTATACGTACATCTTGGAATGCGGTGATGGAACGTACTACACGGGCTATACGACAGACGTGGAAAAACGACTCCTTG
CACATAATGCCGGGAAAGGT

Product: methyltransferase small

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MVTVKDGERLDDLLGRPGKIIQSDDVFSFSLDAVLLAEFVWVPIQKGQLVDLCAGTGAIPLFLSYRTKGTITGVEIQSKL
VDMANRSMAVNHLEERIRVVKGDVKTAAAQLGHARYDVITCNPPYFLANETSLRNQNEHHTIARHEVLCTLEDCIKTASQ
LVKPGGKVAFVHRPERLLDILTLMRAYRIEPKRMQLVYPKAGREANTLLIEGSKDGKAGLKILPPFVVYEEDDTYTEAMR
AILDA

Sequences:

>Translated_245_residues
MVTVKDGERLDDLLGRPGKIIQSDDVFSFSLDAVLLAEFVWVPIQKGQLVDLCAGTGAIPLFLSYRTKGTITGVEIQSKL
VDMANRSMAVNHLEERIRVVKGDVKTAAAQLGHARYDVITCNPPYFLANETSLRNQNEHHTIARHEVLCTLEDCIKTASQ
LVKPGGKVAFVHRPERLLDILTLMRAYRIEPKRMQLVYPKAGREANTLLIEGSKDGKAGLKILPPFVVYEEDDTYTEAMR
AILDA
>Mature_245_residues
MVTVKDGERLDDLLGRPGKIIQSDDVFSFSLDAVLLAEFVWVPIQKGQLVDLCAGTGAIPLFLSYRTKGTITGVEIQSKL
VDMANRSMAVNHLEERIRVVKGDVKTAAAQLGHARYDVITCNPPYFLANETSLRNQNEHHTIARHEVLCTLEDCIKTASQ
LVKPGGKVAFVHRPERLLDILTLMRAYRIEPKRMQLVYPKAGREANTLLIEGSKDGKAGLKILPPFVVYEEDDTYTEAMR
AILDA

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 27274; Mature: 27274

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTVKDGERLDDLLGRPGKIIQSDDVFSFSLDAVLLAEFVWVPIQKGQLVDLCAGTGAIP
CEECCCCCHHHHHHCCCCCEEECCCCEEEHHHHHHHHHHHHEECCCCCEEEEECCCCCEE
LFLSYRTKGTITGVEIQSKLVDMANRSMAVNHLEERIRVVKGDVKTAAAQLGHARYDVIT
EEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEE
CNPPYFLANETSLRNQNEHHTIARHEVLCTLEDCIKTASQLVKPGGKVAFVHRPERLLDI
CCCCEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHH
LTLMRAYRIEPKRMQLVYPKAGREANTLLIEGSKDGKAGLKILPPFVVYEEDDTYTEAMR
HHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCEECCCEEEEECCCCHHHHHH
AILDA
HHHCC
>Mature Secondary Structure
MVTVKDGERLDDLLGRPGKIIQSDDVFSFSLDAVLLAEFVWVPIQKGQLVDLCAGTGAIP
CEECCCCCHHHHHHCCCCCEEECCCCEEEHHHHHHHHHHHHEECCCCCEEEEECCCCCEE
LFLSYRTKGTITGVEIQSKLVDMANRSMAVNHLEERIRVVKGDVKTAAAQLGHARYDVIT
EEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEE
CNPPYFLANETSLRNQNEHHTIARHEVLCTLEDCIKTASQLVKPGGKVAFVHRPERLLDI
CCCCEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHH
LTLMRAYRIEPKRMQLVYPKAGREANTLLIEGSKDGKAGLKILPPFVVYEEDDTYTEAMR
HHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCEECCCEEEEECCCCHHHHHH
AILDA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]