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The map label for this gene is yhbQ [C]

Identifier: 229917425

GI number: 229917425

Start: 1650980

End: 1651258

Strand: Reverse

Name: yhbQ [C]

Synonym: EAT1b_1700

Alternate gene names: 229917425

Gene position: 1651258-1650980 (Counterclockwise)

Preceding gene: 229917426

Following gene: 229917424

Centisome position: 55.04

GC content: 47.31

Gene sequence:

>279_bases
ATGCCTAAACATTATACGTACATCTTGGAATGCGGTGATGGAACGTACTACACGGGCTATACGACAGACGTGGAAAAACG
ACTCCTTGCACATAATGCCGGGAAAGGTGCGAAATATACGAAAGCCCGTCTCCCTGTACGACTTCGGTACGTACAATCGT
TTGAGACGAAGCGAGAGGCCATGCGATACGAATGGTCCATCAAGCAATTGACCCGAGCACAAAAAGAGAAGTTGATGGAG
GGGACGACCAATGAATTCACAGAAGAGCTATCAAACTGA

Upstream 100 bases:

>100_bases
GAGGGATCGAAAGATGGAAAAGCAGGTCTTAAAATTTTACCGCCATTTGTTGTCTATGAAGAAGACGATACGTATACAGA
AGCGATGCGAGCTATTCTCG

Downstream 100 bases:

>100_bases
ACAACCGACGTTGTATGTCGTGCCGACCCCAATCGGGAACTTGGAAGATATGACGTATCGAGCGGTACGGACCCTTCAGG
AAGTTGACTTAATCGCAGCG

Product: excinuclease ABC C subunit domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MPKHYTYILECGDGTYYTGYTTDVEKRLLAHNAGKGAKYTKARLPVRLRYVQSFETKREAMRYEWSIKQLTRAQKEKLME
GTTNEFTEELSN

Sequences:

>Translated_92_residues
MPKHYTYILECGDGTYYTGYTTDVEKRLLAHNAGKGAKYTKARLPVRLRYVQSFETKREAMRYEWSIKQLTRAQKEKLME
GTTNEFTEELSN
>Mature_91_residues
PKHYTYILECGDGTYYTGYTTDVEKRLLAHNAGKGAKYTKARLPVRLRYVQSFETKREAMRYEWSIKQLTRAQKEKLMEG
TTNEFTEELSN

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=93, Percent_Identity=38.7096774193548, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 10835; Mature: 10704

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKHYTYILECGDGTYYTGYTTDVEKRLLAHNAGKGAKYTKARLPVRLRYVQSFETKREA
CCCCEEEEEECCCCCEECCCCCHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHH
MRYEWSIKQLTRAQKEKLMEGTTNEFTEELSN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
PKHYTYILECGDGTYYTGYTTDVEKRLLAHNAGKGAKYTKARLPVRLRYVQSFETKREA
CCCEEEEEECCCCCEECCCCCHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHH
MRYEWSIKQLTRAQKEKLMEGTTNEFTEELSN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11016950 [H]