| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917427
Identifier: 229917427
GI number: 229917427
Start: 1652049
End: 1652384
Strand: Reverse
Name: 229917427
Synonym: EAT1b_1702
Alternate gene names: NA
Gene position: 1652384-1652049 (Counterclockwise)
Preceding gene: 229917428
Following gene: 229917426
Centisome position: 55.08
GC content: 42.26
Gene sequence:
>336_bases ATGGACAAAAAAGAAGTGATGATGCGGGTGGATGCGATCGAACAACAGATGCAGCTCCTCACCGAACATTTAGGCGTGTT AAAAGAGCAGCTCGCTTATTTGCTTGAAGAGAACCAGCATATGTATCTAGAGAATCATCACTTACGCGAAAAAGTCGAAC AATTGGCAGAAGTTGATACGACAAATGGTGATTCACAAATCGCATTGTCTGGGAAAGGGCAGAACAATTTAGCTGCGCTG TATCAAGAAGGATTCCATATTTGTAACCTCCATTACGGACAGGTACGAAAAGATGGGGACTGTCTCTTCTGTTTGTCGAT GCTCAATAAACATTAA
Upstream 100 bases:
>100_bases GGACGCGTGTCGTCACATATACGATTGATGAACTCGTTGAAGTGGGTGCGATTAAACGAAAACCGTCAAAACAGTGATGG GGTGCTGAGCAGTGGAAAGA
Downstream 100 bases:
>100_bases TATGGGGCGATAGATAGGGGTTCCCTATCCGTCGCCTTTCTTTTATAGAAGGAGGAAACGATGGTAACGGTTAAGGATGG AGAACGCCTTGATGATTTAC
Product: DNA replication intiation control protein YabA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MDKKEVMMRVDAIEQQMQLLTEHLGVLKEQLAYLLEENQHMYLENHHLREKVEQLAEVDTTNGDSQIALSGKGQNNLAAL YQEGFHICNLHYGQVRKDGDCLFCLSMLNKH
Sequences:
>Translated_111_residues MDKKEVMMRVDAIEQQMQLLTEHLGVLKEQLAYLLEENQHMYLENHHLREKVEQLAEVDTTNGDSQIALSGKGQNNLAAL YQEGFHICNLHYGQVRKDGDCLFCLSMLNKH >Mature_111_residues MDKKEVMMRVDAIEQQMQLLTEHLGVLKEQLAYLLEENQHMYLENHHLREKVEQLAEVDTTNGDSQIALSGKGQNNLAAL YQEGFHICNLHYGQVRKDGDCLFCLSMLNKH
Specific function: Involved in initiation control of chromosome replication [H]
COG id: COG4467
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yabA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010377 - InterPro: IPR014751 [H]
Pfam domain/function: PF06156 DUF972 [H]
EC number: NA
Molecular weight: Translated: 12827; Mature: 12827
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKEVMMRVDAIEQQMQLLTEHLGVLKEQLAYLLEENQHMYLENHHLREKVEQLAEVDT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCC TNGDSQIALSGKGQNNLAALYQEGFHICNLHYGQVRKDGDCLFCLSMLNKH CCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MDKKEVMMRVDAIEQQMQLLTEHLGVLKEQLAYLLEENQHMYLENHHLREKVEQLAEVDT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCC TNGDSQIALSGKGQNNLAALYQEGFHICNLHYGQVRKDGDCLFCLSMLNKH CCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA