| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917236
Identifier: 229917236
GI number: 229917236
Start: 1480004
End: 1480897
Strand: Direct
Name: 229917236
Synonym: EAT1b_1511
Alternate gene names: NA
Gene position: 1480004-1480897 (Clockwise)
Preceding gene: 229917235
Following gene: 229917238
Centisome position: 49.34
GC content: 48.99
Gene sequence:
>894_bases ATGATTGGAATCGCGATGTCTACGTATTGTAACGAGGAAATCATTCGGGAAACGATTCAGTCCATCCAACAGCAAACGGC CGAATTCGTCTGCGTGATTGCGGATGATGGCTCGACCGATCGAACCGTCGAGGTCATGCGAGAGTTGACTGCAGACGATG ATCGATTCATCATCCTCTCCCTTCCTCACGGTGAACGCGGTGTCGCTCGCAAAGAGTCCATCGGGCGTCTTCGGGAACTT CACGTCGACGTACTATATGTCATCGACTCGGACATGGTGTTGACCGAAGGACTGCTGACGAGCTGCTTACTCTATCTGCA ACACCATGAAGAAGTGGGAGCTCTTGTTATCCCTGAAGAAGCCTACAGCACCTATACCAATTTTTTTTCTAAAGTAAAGG TGTTTGAGCGTAACCTATTCCAAATTCCTGAAGAACGGATTGACGACCGTTCCATCGAGGCGGCACGCTTTTGGCGGATG GAGGCATACGAAGTATCGGGTGGAATCAACCCCGCTCAAATTAGTTTTGAAGAAACACAACCGACGATTCGTTACATTCA GCAAGGTGGCATCATCCGTCGCGCCACGTTCACCTCGGTGAAACATAACGAGAAGGAAGTGACGCTTCAAAACTTGCTCG AGAAGAAACGTTATTACTTCCAAGTGATGCCACAGACGCTCGAGACAGAGGAAGGCGGTTTCCGAAAGGCGCTGGCGCGT TGGTACTTTTTTAGACCCGTGCTCTATCATCCATCAAACCTAAAAAAATATAGACGACACCCAGTGCTGACACTAGGAGT CGCCTACATGTACCTTCGCTTAACATTCATCGGGGTATCGCAACTCTTCACCCATAAGTTTGGGAAGAGCGATCCCGTGA CTGATACAAAATGA
Upstream 100 bases:
>100_bases ATACGTTTTCCAAAACGTTGCAGTGGAGTCGTACTGGCGCTGCATTCGAACAATGGTTGACCGATAAACTCGGAATCTTG ATTCAGGAAGGGAGAACATC
Downstream 100 bases:
>100_bases AGTCGCCGTACTGGGTCGGGATGACGAAGCGTTTTAACTCACTCGTCTCCCCGACCTCAAACGGTACAACAAGATTTTCC GAACTGACTAAGTCACCACT
Product: glycosyl transferase family 2
Products: NA
Alternate protein names: Beta-1 3-Galactosyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MIGIAMSTYCNEEIIRETIQSIQQQTAEFVCVIADDGSTDRTVEVMRELTADDDRFIILSLPHGERGVARKESIGRLREL HVDVLYVIDSDMVLTEGLLTSCLLYLQHHEEVGALVIPEEAYSTYTNFFSKVKVFERNLFQIPEERIDDRSIEAARFWRM EAYEVSGGINPAQISFEETQPTIRYIQQGGIIRRATFTSVKHNEKEVTLQNLLEKKRYYFQVMPQTLETEEGGFRKALAR WYFFRPVLYHPSNLKKYRRHPVLTLGVAYMYLRLTFIGVSQLFTHKFGKSDPVTDTK
Sequences:
>Translated_297_residues MIGIAMSTYCNEEIIRETIQSIQQQTAEFVCVIADDGSTDRTVEVMRELTADDDRFIILSLPHGERGVARKESIGRLREL HVDVLYVIDSDMVLTEGLLTSCLLYLQHHEEVGALVIPEEAYSTYTNFFSKVKVFERNLFQIPEERIDDRSIEAARFWRM EAYEVSGGINPAQISFEETQPTIRYIQQGGIIRRATFTSVKHNEKEVTLQNLLEKKRYYFQVMPQTLETEEGGFRKALAR WYFFRPVLYHPSNLKKYRRHPVLTLGVAYMYLRLTFIGVSQLFTHKFGKSDPVTDTK >Mature_297_residues MIGIAMSTYCNEEIIRETIQSIQQQTAEFVCVIADDGSTDRTVEVMRELTADDDRFIILSLPHGERGVARKESIGRLREL HVDVLYVIDSDMVLTEGLLTSCLLYLQHHEEVGALVIPEEAYSTYTNFFSKVKVFERNLFQIPEERIDDRSIEAARFWRM EAYEVSGGINPAQISFEETQPTIRYIQQGGIIRRATFTSVKHNEKEVTLQNLLEKKRYYFQVMPQTLETEEGGFRKALAR WYFFRPVLYHPSNLKKYRRHPVLTLGVAYMYLRLTFIGVSQLFTHKFGKSDPVTDTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34498; Mature: 34498
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGIAMSTYCNEEIIRETIQSIQQQTAEFVCVIADDGSTDRTVEVMRELTADDDRFIILS CCEEEHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEE LPHGERGVARKESIGRLRELHVDVLYVIDSDMVLTEGLLTSCLLYLQHHEEVGALVIPEE CCCCCCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECHH AYSTYTNFFSKVKVFERNLFQIPEERIDDRSIEAARFWRMEAYEVSGGINPAQISFEETQ HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHEEEEECCCCCHHEEEEHHCC PTIRYIQQGGIIRRATFTSVKHNEKEVTLQNLLEKKRYYFQVMPQTLETEEGGFRKALAR HHHHHHHHCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHH WYFFRPVLYHPSNLKKYRRHPVLTLGVAYMYLRLTFIGVSQLFTHKFGKSDPVTDTK HHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIGIAMSTYCNEEIIRETIQSIQQQTAEFVCVIADDGSTDRTVEVMRELTADDDRFIILS CCEEEHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEE LPHGERGVARKESIGRLRELHVDVLYVIDSDMVLTEGLLTSCLLYLQHHEEVGALVIPEE CCCCCCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECHH AYSTYTNFFSKVKVFERNLFQIPEERIDDRSIEAARFWRMEAYEVSGGINPAQISFEETQ HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHEEEEECCCCCHHEEEEHHCC PTIRYIQQGGIIRRATFTSVKHNEKEVTLQNLLEKKRYYFQVMPQTLETEEGGFRKALAR HHHHHHHHCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHH WYFFRPVLYHPSNLKKYRRHPVLTLGVAYMYLRLTFIGVSQLFTHKFGKSDPVTDTK HHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA