Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229917235

Identifier: 229917235

GI number: 229917235

Start: 1478868

End: 1480007

Strand: Direct

Name: 229917235

Synonym: EAT1b_1510

Alternate gene names: NA

Gene position: 1478868-1480007 (Clockwise)

Preceding gene: 229917234

Following gene: 229917236

Centisome position: 49.3

GC content: 51.14

Gene sequence:

>1140_bases
ATGAAACCCACTTTATTGTGTTTATCTTGGCGAGACATCAAACATCCGAAAGCAGGAGGGGCTGAAGTATTCACGCATGA
GATGCTCGCTTACGTGGCCCCTCGTTATAACATTATTCATCTGTCCCCTCATATCGACGGACGTGAGGACGAGGAATGGA
TTGATGGCGTTCGTTATATTCGCTCGGGTACAGACATGACGAGCATCGTAGAGGCAAGGCGCTACTACAAAGTGCACGAG
GATGAAATCGATCTCGTCCTCGATCAGATGAATACACACCATTACTTCACACCTTTCTATGTCCCTGCACACAAACGCAT
TCTCTTCATCCATCAATTGACGCGTGAGATTTGGCGCATCAACCTTCCTCCTCCCGTCTCATGGGTCGGGGCATGGACGG
AAACGAGCCGTCTGCGTCTCTATCGGCAAAACGACGTCTTGACCGTCAGTCAGTCGACGGCAGATGATCTCGTCGCCGTC
GGAATTCCAGAGTCGCATATCACAATTTTGCCAGAAGGACTCAACTTCACACCGTGGCTAGAAGAAGAATGGTTTGAGAA
AGAAGAGCATCCTACATTCTTATATGTCGGACGCATGTCCGCCTATAAAGGAATCAACGATGCCGTCAAAGCGTTCGTTT
CCATCAAGCGCGACTTCCCGACCGCACAACTGTGGATCATCGGGAAGAAGAATGAGGCGTATATCGCTGAACAACTGAAC
CCGATCACACCTGAGGATGTGCGTTCGGACATCCATTATTTTGGCTTTGTGAGTGAAGAAGAGAAACTCGAGCGGATGAG
TCGAGCGACAGCCCTTCTCTTTCCATCCCGTCGAGAAGGATGGGGCTTGACTGTCAGTGAGGCCGCCGCTGTCGGTACAC
CGACCATCGTCTACGATGCGCCGGGACTTCGGGACGCGGTTCAGTACGGAAAACTCGGTTACATGACGATGGCACAAACC
GCAGAGGCGCTCGCGCTCGAGATGAGACGCTGTTTAAACGACCCGACTCACTATGAAACGGTGCGACGCGATGCCCATAC
GTTTTCCAAAACGTTGCAGTGGAGTCGTACTGGCGCTGCATTCGAACAATGGTTGACCGATAAACTCGGAATCTTGATTC
AGGAAGGGAGAACATCATGA

Upstream 100 bases:

>100_bases
TGTGGCTCTTCGCTCAGGCGGTCGTTTTACTCGGAGGCTCGCTACTTCTTCGTTTCCGCTTCCACTCTGAGCGACGTCGA
CATTTAAAGGAGGAATCGTG

Downstream 100 bases:

>100_bases
TTGGAATCGCGATGTCTACGTATTGTAACGAGGAAATCATTCGGGAAACGATTCAGTCCATCCAACAGCAAACGGCCGAA
TTCGTCTGCGTGATTGCGGA

Product: glycosyl transferase group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKPTLLCLSWRDIKHPKAGGAEVFTHEMLAYVAPRYNIIHLSPHIDGREDEEWIDGVRYIRSGTDMTSIVEARRYYKVHE
DEIDLVLDQMNTHHYFTPFYVPAHKRILFIHQLTREIWRINLPPPVSWVGAWTETSRLRLYRQNDVLTVSQSTADDLVAV
GIPESHITILPEGLNFTPWLEEEWFEKEEHPTFLYVGRMSAYKGINDAVKAFVSIKRDFPTAQLWIIGKKNEAYIAEQLN
PITPEDVRSDIHYFGFVSEEEKLERMSRATALLFPSRREGWGLTVSEAAAVGTPTIVYDAPGLRDAVQYGKLGYMTMAQT
AEALALEMRRCLNDPTHYETVRRDAHTFSKTLQWSRTGAAFEQWLTDKLGILIQEGRTS

Sequences:

>Translated_379_residues
MKPTLLCLSWRDIKHPKAGGAEVFTHEMLAYVAPRYNIIHLSPHIDGREDEEWIDGVRYIRSGTDMTSIVEARRYYKVHE
DEIDLVLDQMNTHHYFTPFYVPAHKRILFIHQLTREIWRINLPPPVSWVGAWTETSRLRLYRQNDVLTVSQSTADDLVAV
GIPESHITILPEGLNFTPWLEEEWFEKEEHPTFLYVGRMSAYKGINDAVKAFVSIKRDFPTAQLWIIGKKNEAYIAEQLN
PITPEDVRSDIHYFGFVSEEEKLERMSRATALLFPSRREGWGLTVSEAAAVGTPTIVYDAPGLRDAVQYGKLGYMTMAQT
AEALALEMRRCLNDPTHYETVRRDAHTFSKTLQWSRTGAAFEQWLTDKLGILIQEGRTS
>Mature_379_residues
MKPTLLCLSWRDIKHPKAGGAEVFTHEMLAYVAPRYNIIHLSPHIDGREDEEWIDGVRYIRSGTDMTSIVEARRYYKVHE
DEIDLVLDQMNTHHYFTPFYVPAHKRILFIHQLTREIWRINLPPPVSWVGAWTETSRLRLYRQNDVLTVSQSTADDLVAV
GIPESHITILPEGLNFTPWLEEEWFEKEEHPTFLYVGRMSAYKGINDAVKAFVSIKRDFPTAQLWIIGKKNEAYIAEQLN
PITPEDVRSDIHYFGFVSEEEKLERMSRATALLFPSRREGWGLTVSEAAAVGTPTIVYDAPGLRDAVQYGKLGYMTMAQT
AEALALEMRRCLNDPTHYETVRRDAHTFSKTLQWSRTGAAFEQWLTDKLGILIQEGRTS

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43686; Mature: 43686

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTLLCLSWRDIKHPKAGGAEVFTHEMLAYVAPRYNIIHLSPHIDGREDEEWIDGVRYI
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH
RSGTDMTSIVEARRYYKVHEDEIDLVLDQMNTHHYFTPFYVPAHKRILFIHQLTREIWRI
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCEEECCCHHHHHHHHHHHHHEEE
NLPPPVSWVGAWTETSRLRLYRQNDVLTVSQSTADDLVAVGIPESHITILPEGLNFTPWL
CCCCCCCEEECCCCCCEEEEEECCCEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCC
EEEWFEKEEHPTFLYVGRMSAYKGINDAVKAFVSIKRDFPTAQLWIIGKKNEAYIAEQLN
CHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCC
PITPEDVRSDIHYFGFVSEEEKLERMSRATALLFPSRREGWGLTVSEAAAVGTPTIVYDA
CCCHHHHHCCHHHEEECCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHCCCCEEEECC
PGLRDAVQYGKLGYMTMAQTAEALALEMRRCLNDPTHYETVRRDAHTFSKTLQWSRTGAA
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
FEQWLTDKLGILIQEGRTS
HHHHHHHHHCEEEECCCCC
>Mature Secondary Structure
MKPTLLCLSWRDIKHPKAGGAEVFTHEMLAYVAPRYNIIHLSPHIDGREDEEWIDGVRYI
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH
RSGTDMTSIVEARRYYKVHEDEIDLVLDQMNTHHYFTPFYVPAHKRILFIHQLTREIWRI
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCEEECCCHHHHHHHHHHHHHEEE
NLPPPVSWVGAWTETSRLRLYRQNDVLTVSQSTADDLVAVGIPESHITILPEGLNFTPWL
CCCCCCCEEECCCCCCEEEEEECCCEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCC
EEEWFEKEEHPTFLYVGRMSAYKGINDAVKAFVSIKRDFPTAQLWIIGKKNEAYIAEQLN
CHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCC
PITPEDVRSDIHYFGFVSEEEKLERMSRATALLFPSRREGWGLTVSEAAAVGTPTIVYDA
CCCHHHHHCCHHHEEECCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHCCCCEEEECC
PGLRDAVQYGKLGYMTMAQTAEALALEMRRCLNDPTHYETVRRDAHTFSKTLQWSRTGAA
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
FEQWLTDKLGILIQEGRTS
HHHHHHHHHCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]