| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is tagG [H]
Identifier: 229916790
GI number: 229916790
Start: 1014184
End: 1014981
Strand: Reverse
Name: tagG [H]
Synonym: EAT1b_1063
Alternate gene names: 229916790
Gene position: 1014981-1014184 (Counterclockwise)
Preceding gene: 229916791
Following gene: 229916789
Centisome position: 33.83
GC content: 49.62
Gene sequence:
>798_bases ATGTTTAAATCCGCGAAAGCTATTCTTTCAGAGCTAAAGTCGAGCTTGTACTTGATTTTCCGTCTCGCCACGTATGAGAC GCGAAGCAACAACTCGATGCAGTACCTCGGATTTTTATGGGAGTTCGTGACACCGTTATTGCAGATTGGAGTTTACTGGT TCGTATTTGGATTTGGTATTCGAAGCGGCAGGCCGATTGATGGCGTGCCGTTTCTGCCATGGTTGGTCGCAGGGATTGTC GTCTGGTTCTTCATTGCCTCGGCGATTACCTCTACGGCCCGGTCCGTCTATTCGAAAATCGGCATGGTCTCCAAAATGAG CTTCCCAATCTCGACGATTCCGGCATACGTCTTGCTCGCACTCTTCTATCGCCACGTGGCGTTAGTCGGTGTCTCGTTTA TCTTGATGTGGGCATTCGGATTCCCGATGGGGCTACATTCGCTCTGGTTTATCTACTTGGCATTCAGTGCGCTCGCACTA CTGTACTCGCTCGCCTTGATTACGTCCGCGCTCACGACAATCGTGCGCGATCTTCAAAACCTTCTTCAGTCGATGATGCG GATGTTGATGTATTTGACACCGATTTTTTGGGTGCCGCCGGCGAAGCTCGCGAATATCCTACAAATCAATCCGCTCTATT ATTTAGTCGAAGGATATCGGTCGATGTTCCTCGGAACCGACTGGTTGGCGACTAACTGGGCTTACGGTCTCTATTACTGG GCCATCGTCTTCGTTCTCTTCTTCGTCGGGTCGATGATTCATTTGCGTTTCCGTCGACACTTCATCGATTACATTTGA
Upstream 100 bases:
>100_bases CGTGAAACCAGAAGGTGAAGACGTAGCGGTCGTCAACTACGGCAACCTCTACAAATATACAAAGGAAACGAATCTCGTTC TTTGATTCAGGTGAATGAAC
Downstream 100 bases:
>100_bases GGAGGACCTTATGTACCAGGTTAAATTTGAAAACGTATCGAAACGATATACGCTTTATAACAAGCAATCTGATAAGCTGA AAGAGATCTTCTTCAGTAAA
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MFKSAKAILSELKSSLYLIFRLATYETRSNNSMQYLGFLWEFVTPLLQIGVYWFVFGFGIRSGRPIDGVPFLPWLVAGIV VWFFIASAITSTARSVYSKIGMVSKMSFPISTIPAYVLLALFYRHVALVGVSFILMWAFGFPMGLHSLWFIYLAFSALAL LYSLALITSALTTIVRDLQNLLQSMMRMLMYLTPIFWVPPAKLANILQINPLYYLVEGYRSMFLGTDWLATNWAYGLYYW AIVFVLFFVGSMIHLRFRRHFIDYI
Sequences:
>Translated_265_residues MFKSAKAILSELKSSLYLIFRLATYETRSNNSMQYLGFLWEFVTPLLQIGVYWFVFGFGIRSGRPIDGVPFLPWLVAGIV VWFFIASAITSTARSVYSKIGMVSKMSFPISTIPAYVLLALFYRHVALVGVSFILMWAFGFPMGLHSLWFIYLAFSALAL LYSLALITSALTTIVRDLQNLLQSMMRMLMYLTPIFWVPPAKLANILQINPLYYLVEGYRSMFLGTDWLATNWAYGLYYW AIVFVLFFVGSMIHLRFRRHFIDYI >Mature_265_residues MFKSAKAILSELKSSLYLIFRLATYETRSNNSMQYLGFLWEFVTPLLQIGVYWFVFGFGIRSGRPIDGVPFLPWLVAGIV VWFFIASAITSTARSVYSKIGMVSKMSFPISTIPAYVLLALFYRHVALVGVSFILMWAFGFPMGLHSLWFIYLAFSALAL LYSLALITSALTTIVRDLQNLLQSMMRMLMYLTPIFWVPPAKLANILQINPLYYLVEGYRSMFLGTDWLATNWAYGLYYW AIVFVLFFVGSMIHLRFRRHFIDYI
Specific function: Part of the ABC transporter complex tagGH (TC 3.A.1.34.1) involved in exporting the two types of intracellularly synthesized teichoic acids. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1682
COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000412 - InterPro: IPR013525 [H]
Pfam domain/function: PF01061 ABC2_membrane [H]
EC number: NA
Molecular weight: Translated: 30587; Mature: 30587
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSAKAILSELKSSLYLIFRLATYETRSNNSMQYLGFLWEFVTPLLQIGVYWFVFGFGI CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC RSGRPIDGVPFLPWLVAGIVVWFFIASAITSTARSVYSKIGMVSKMSFPISTIPAYVLLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LFYRHVALVGVSFILMWAFGFPMGLHSLWFIYLAFSALALLYSLALITSALTTIVRDLQN HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQSMMRMLMYLTPIFWVPPAKLANILQINPLYYLVEGYRSMFLGTDWLATNWAYGLYYW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AIVFVLFFVGSMIHLRFRRHFIDYI HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFKSAKAILSELKSSLYLIFRLATYETRSNNSMQYLGFLWEFVTPLLQIGVYWFVFGFGI CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC RSGRPIDGVPFLPWLVAGIVVWFFIASAITSTARSVYSKIGMVSKMSFPISTIPAYVLLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LFYRHVALVGVSFILMWAFGFPMGLHSLWFIYLAFSALALLYSLALITSALTTIVRDLQN HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQSMMRMLMYLTPIFWVPPAKLANILQINPLYYLVEGYRSMFLGTDWLATNWAYGLYYW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AIVFVLFFVGSMIHLRFRRHFIDYI HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7565096; 9384377 [H]