| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is wecC [H]
Identifier: 229916791
GI number: 229916791
Start: 1014997
End: 1016286
Strand: Reverse
Name: wecC [H]
Synonym: EAT1b_1064
Alternate gene names: 229916791
Gene position: 1016286-1014997 (Counterclockwise)
Preceding gene: 229916792
Following gene: 229916790
Centisome position: 33.88
GC content: 49.77
Gene sequence:
>1290_bases ATGAAAGTATGTACAGTAGGTCTTGGATATATCGGATTACCGACATCGGCTGTCTTTGCGAACTATGGCGTCGACGTCGT CGGAGTCGATATCTCACAACATGTTGTTGATAAATTGAACCGTGGAGAAATCCACATTGAAGAGCCAGGTCTCGGCGAAA TGGTCGCAGACGTCGTGGCAAAAGGGAAGTTCCGTGCATCACTCTCTCCAGAGAAAGCAGATGCCTTCATCATCGCGGTC CCAACACCGAACAACGACGACGAGCACAAATCATGTGACTTGACGTACGTCTTGGATGCGACACGCAAAGTGTTGCCATT CGTTGAAAAAGGTAACGTCATCATCGTTGAGTCGACAATCGCACCACGTACGATGGACGACTTCGTCAAACCACTCGTCG AAGAAGCTGGATTCACTGTCGGTGAAGACATCTATCTCGTACACTGCCCAGAGCGCGTATTGCCTGGACAAATCCTTCAT GAGCTCGTGCACAACAACCGCATCGTCGGTGGAATCACGACAGAATGTGCAGAAGCAGGCGCACGCGTCTACGGTACATT CGTTGAAGGTGAAATCGTGAAAACGGATGCGAAGACGGCAGAAATGTCGAAACTCATGGAAAACACGTTCCGTGACGTCA ACATCGCACTCGCGAACGAACTCGCAAAAGTATGTAACGACTTAGACATCAACGTTCTTGACGTCATCGAGATGGCGAAC AAGCACCCACGTGTCAACTTGCATAGCCCAGGCCCAGGTGTCGGTGGACACTGTCTCGCGGTCGACCCGTACTTCATCGT CGCGAAATCACCTGACCTGGCGAAAATCATCAACTTGTCACGTGAGACGAACGTCTCGATGCCACACTACGTTGCAGACA ACGTTCAGAAGTTGACTGCTGGAATCGAAGATGCGAAAGTCGCGGTCTTTGGTGTGACATACAAAGGAAACGTCGACGAC ATGCGTGAAAGCCCAGCGGTTGAAATCGCTGAAATCTTGCTTGACCGTGGTGTGAACATCTCTGTTCACGACTCACACGT TGAAAAATCAACATCAAGCCGTTTCGAGCTCGTTTCAAAAGAAGAAGCACTCAAAGACGCGGACCTCGTCCTCGTATTGG TTGACCACAACGAGTTCAAAGTCCTCGACTTCGCAGAGCTCAAGTCAACGATGCGTCGTCCGATGATCTTCGACACACGT AACATCGTGAAACCAGAAGGTGAAGACGTAGCGGTCGTCAACTACGGCAACCTCTACAAATATACAAAGGAAACGAATCT CGTTCTTTGA
Upstream 100 bases:
>100_bases AAGAGTATAATGAGTATTGTTTTATTATCGAATGTGAAATAAAATGATGGACAATGCGCTATTTAAAAAGCGCGTCAAAA CATTTGGAGGTTACCACACA
Downstream 100 bases:
>100_bases TTCAGGTGAATGAACATGTTTAAATCCGCGAAAGCTATTCTTTCAGAGCTAAAGTCGAGCTTGTACTTGATTTTCCGTCT CGCCACGTATGAGACGCGAA
Product: nucleotide sugar dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKVCTVGLGYIGLPTSAVFANYGVDVVGVDISQHVVDKLNRGEIHIEEPGLGEMVADVVAKGKFRASLSPEKADAFIIAV PTPNNDDEHKSCDLTYVLDATRKVLPFVEKGNVIIVESTIAPRTMDDFVKPLVEEAGFTVGEDIYLVHCPERVLPGQILH ELVHNNRIVGGITTECAEAGARVYGTFVEGEIVKTDAKTAEMSKLMENTFRDVNIALANELAKVCNDLDINVLDVIEMAN KHPRVNLHSPGPGVGGHCLAVDPYFIVAKSPDLAKIINLSRETNVSMPHYVADNVQKLTAGIEDAKVAVFGVTYKGNVDD MRESPAVEIAEILLDRGVNISVHDSHVEKSTSSRFELVSKEEALKDADLVLVLVDHNEFKVLDFAELKSTMRRPMIFDTR NIVKPEGEDVAVVNYGNLYKYTKETNLVL
Sequences:
>Translated_429_residues MKVCTVGLGYIGLPTSAVFANYGVDVVGVDISQHVVDKLNRGEIHIEEPGLGEMVADVVAKGKFRASLSPEKADAFIIAV PTPNNDDEHKSCDLTYVLDATRKVLPFVEKGNVIIVESTIAPRTMDDFVKPLVEEAGFTVGEDIYLVHCPERVLPGQILH ELVHNNRIVGGITTECAEAGARVYGTFVEGEIVKTDAKTAEMSKLMENTFRDVNIALANELAKVCNDLDINVLDVIEMAN KHPRVNLHSPGPGVGGHCLAVDPYFIVAKSPDLAKIINLSRETNVSMPHYVADNVQKLTAGIEDAKVAVFGVTYKGNVDD MRESPAVEIAEILLDRGVNISVHDSHVEKSTSSRFELVSKEEALKDADLVLVLVDHNEFKVLDFAELKSTMRRPMIFDTR NIVKPEGEDVAVVNYGNLYKYTKETNLVL >Mature_429_residues MKVCTVGLGYIGLPTSAVFANYGVDVVGVDISQHVVDKLNRGEIHIEEPGLGEMVADVVAKGKFRASLSPEKADAFIIAV PTPNNDDEHKSCDLTYVLDATRKVLPFVEKGNVIIVESTIAPRTMDDFVKPLVEEAGFTVGEDIYLVHCPERVLPGQILH ELVHNNRIVGGITTECAEAGARVYGTFVEGEIVKTDAKTAEMSKLMENTFRDVNIALANELAKVCNDLDINVLDVIEMAN KHPRVNLHSPGPGVGGHCLAVDPYFIVAKSPDLAKIINLSRETNVSMPHYVADNVQKLTAGIEDAKVAVFGVTYKGNVDD MRESPAVEIAEILLDRGVNISVHDSHVEKSTSSRFELVSKEEALKDADLVLVLVDHNEFKVLDFAELKSTMRRPMIFDTR NIVKPEGEDVAVVNYGNLYKYTKETNLVL
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=442, Percent_Identity=24.4343891402715, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI296040443, Length=431, Percent_Identity=24.3619489559165, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI296040438, Length=346, Percent_Identity=22.8323699421965, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI48994968, Length=400, Percent_Identity=46, Blast_Score=360, Evalue=1e-100, Organism=Escherichia coli, GI1788340, Length=376, Percent_Identity=25, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560350, Length=440, Percent_Identity=25.9090909090909, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI17136908, Length=448, Percent_Identity=25.2232142857143, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 46977; Mature: 46977
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVCTVGLGYIGLPTSAVFANYGVDVVGVDISQHVVDKLNRGEIHIEEPGLGEMVADVVA CEEEEEECCCCCCCHHHHHHHCCCEEEEECHHHHHHHHCCCCEEEEECCCHHHHHHHHHH KGKFRASLSPEKADAFIIAVPTPNNDDEHKSCDLTYVLDATRKVLPFVEKGNVIIVESTI CCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHCCEEECCCEEEEECCC APRTMDDFVKPLVEEAGFTVGEDIYLVHCPERVLPGQILHELVHNNRIVGGITTECAEAG CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCEEEECCCHHHHHCC ARVYGTFVEGEIVKTDAKTAEMSKLMENTFRDVNIALANELAKVCNDLDINVLDVIEMAN CEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC KHPRVNLHSPGPGVGGHCLAVDPYFIVAKSPDLAKIINLSRETNVSMPHYVADNVQKLTA CCCEEEECCCCCCCCCEEEEECCEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHC GIEDAKVAVFGVTYKGNVDDMRESPAVEIAEILLDRGVNISVHDSHVEKSTSSRFELVSK CCCCCEEEEEEEEEECCHHHHHCCCHHHHHHHHHHCCCEEEEEHHHHHHCCCHHHHHHHH EEALKDADLVLVLVDHNEFKVLDFAELKSTMRRPMIFDTRNIVKPEGEDVAVVNYGNLYK HHHCCCCCEEEEEEECCCEEEEEHHHHHHHHCCCEEECCCCCCCCCCCCEEEEECCCEEE YTKETNLVL EECCCCCCC >Mature Secondary Structure MKVCTVGLGYIGLPTSAVFANYGVDVVGVDISQHVVDKLNRGEIHIEEPGLGEMVADVVA CEEEEEECCCCCCCHHHHHHHCCCEEEEECHHHHHHHHCCCCEEEEECCCHHHHHHHHHH KGKFRASLSPEKADAFIIAVPTPNNDDEHKSCDLTYVLDATRKVLPFVEKGNVIIVESTI CCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHCCEEECCCEEEEECCC APRTMDDFVKPLVEEAGFTVGEDIYLVHCPERVLPGQILHELVHNNRIVGGITTECAEAG CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCEEEECCCHHHHHCC ARVYGTFVEGEIVKTDAKTAEMSKLMENTFRDVNIALANELAKVCNDLDINVLDVIEMAN CEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC KHPRVNLHSPGPGVGGHCLAVDPYFIVAKSPDLAKIINLSRETNVSMPHYVADNVQKLTA CCCEEEECCCCCCCCCEEEEECCEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHC GIEDAKVAVFGVTYKGNVDDMRESPAVEIAEILLDRGVNISVHDSHVEKSTSSRFELVSK CCCCCEEEEEEEEEECCHHHHHCCCHHHHHHHHHHCCCEEEEEHHHHHHCCCHHHHHHHH EEALKDADLVLVLVDHNEFKVLDFAELKSTMRRPMIFDTRNIVKPEGEDVAVVNYGNLYK HHHCCCCCEEEEEEECCCEEEEEHHHHHHHHCCCEEECCCCCCCCCCCCEEEEECCCEEE YTKETNLVL EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA