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The map label for this gene is tagH [H]

Identifier: 229916789

GI number: 229916789

Start: 1013286

End: 1014173

Strand: Reverse

Name: tagH [H]

Synonym: EAT1b_1062

Alternate gene names: 229916789

Gene position: 1014173-1013286 (Counterclockwise)

Preceding gene: 229916790

Following gene: 229916788

Centisome position: 33.81

GC content: 50.45

Gene sequence:

>888_bases
ATGTACCAGGTTAAATTTGAAAACGTATCGAAACGATATACGCTTTATAACAAGCAATCTGATAAGCTGAAAGAGATCTT
CTTCAGTAAAGCAGGGGGCAAACAGTTTTACGCGCTCCGCAATGTCACGTTTGAAGTTCCACCCGGAGAAGTGGTAGGGA
TTATCGGGATCAACGGGTCAGGGAAGTCGACGATGTCGAACTTGCTGGCTGACGTGATGCCGCCGACTCACGGGAAAATC
GAACTTCACGGAAAGACGGCGTTGATTGCGATCTCTTCTGGTTTGAACGGCAACTTGACAGGGCTCGAGAACATCGAGCT
CAAAGGCTTGATGCTCGGGATGACGAAACAGGAAATTATCGACTTGACCCCGGCCATCATTGAGTTTGCCGATATCGGTG
ACTTCATCAATCAGCCGGTCAAGACGTACTCGAGCGGAATGAAGTCCCGTCTCGGGTTCGCCATCTCGATCAACGTCGAC
CCGGACATCCTCGTCATCGATGAGGCGCTCTCCGTCGGGGACCAAACGTTCACCGACAAGTGTCTCGCCAAGATGAACGA
GTTCAAAGACCGTGGGAAGACGATCTTCTTCATCAGTCACTCGGTCTCACAAGTTCGCCAATTCTGTACGCTCGGTCTTT
GGCTCGAGTTCGGAGAAGTGCGCGAATATGGACCGGTCGATGAAGTCGTTCGGGAGTACAACAAGTTTTTGAAATGGTTC
CGCAACTTGTCAAAAGAGCAACAAGACTCGTTTAAAGCCGATAAGCTCAAACGTCGTACGACGGTCGTCGATGCGACGGA
GCTCGGAGAGACGTATATCTTACCGCCTTTGACAGAAGAACAACTACAAACACGCCATTCGTCGGTCGCTGTATCGAACG
AAGCGTGA

Upstream 100 bases:

>100_bases
CTCTATTACTGGGCCATCGTCTTCGTTCTCTTCTTCGTCGGGTCGATGATTCATTTGCGTTTCCGTCGACACTTCATCGA
TTACATTTGAGGAGGACCTT

Downstream 100 bases:

>100_bases
GCAATTGGGAGGAGGAAGCACGGCGAAGTCAGACCGTGCGAAACGACCTATGAAAAAAGTCATGACCGTCTTTGGGACGC
GACCAGAAGCCATCAAAATG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MYQVKFENVSKRYTLYNKQSDKLKEIFFSKAGGKQFYALRNVTFEVPPGEVVGIIGINGSGKSTMSNLLADVMPPTHGKI
ELHGKTALIAISSGLNGNLTGLENIELKGLMLGMTKQEIIDLTPAIIEFADIGDFINQPVKTYSSGMKSRLGFAISINVD
PDILVIDEALSVGDQTFTDKCLAKMNEFKDRGKTIFFISHSVSQVRQFCTLGLWLEFGEVREYGPVDEVVREYNKFLKWF
RNLSKEQQDSFKADKLKRRTTVVDATELGETYILPPLTEEQLQTRHSSVAVSNEA

Sequences:

>Translated_295_residues
MYQVKFENVSKRYTLYNKQSDKLKEIFFSKAGGKQFYALRNVTFEVPPGEVVGIIGINGSGKSTMSNLLADVMPPTHGKI
ELHGKTALIAISSGLNGNLTGLENIELKGLMLGMTKQEIIDLTPAIIEFADIGDFINQPVKTYSSGMKSRLGFAISINVD
PDILVIDEALSVGDQTFTDKCLAKMNEFKDRGKTIFFISHSVSQVRQFCTLGLWLEFGEVREYGPVDEVVREYNKFLKWF
RNLSKEQQDSFKADKLKRRTTVVDATELGETYILPPLTEEQLQTRHSSVAVSNEA
>Mature_295_residues
MYQVKFENVSKRYTLYNKQSDKLKEIFFSKAGGKQFYALRNVTFEVPPGEVVGIIGINGSGKSTMSNLLADVMPPTHGKI
ELHGKTALIAISSGLNGNLTGLENIELKGLMLGMTKQEIIDLTPAIIEFADIGDFINQPVKTYSSGMKSRLGFAISINVD
PDILVIDEALSVGDQTFTDKCLAKMNEFKDRGKTIFFISHSVSQVRQFCTLGLWLEFGEVREYGPVDEVVREYNKFLKWF
RNLSKEQQDSFKADKLKRRTTVVDATELGETYILPPLTEEQLQTRHSSVAVSNEA

Specific function: Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=269, Percent_Identity=27.5092936802974, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI27477115, Length=217, Percent_Identity=25.8064516129032, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27262624, Length=263, Percent_Identity=24.7148288973384, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI27262626, Length=263, Percent_Identity=24.7148288973384, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI6005701, Length=217, Percent_Identity=26.2672811059908, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI156105685, Length=247, Percent_Identity=25.9109311740891, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI73747915, Length=239, Percent_Identity=24.6861924686192, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI31657092, Length=191, Percent_Identity=28.2722513089005, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI27436953, Length=219, Percent_Identity=23.2876712328767, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI150417984, Length=194, Percent_Identity=23.1958762886598, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1789032, Length=244, Percent_Identity=27.0491803278689, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786398, Length=215, Percent_Identity=26.5116279069767, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789672, Length=210, Percent_Identity=25.2380952380952, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI48994943, Length=207, Percent_Identity=25.1207729468599, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790525, Length=208, Percent_Identity=27.4038461538462, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787758, Length=205, Percent_Identity=23.9024390243902, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786803, Length=219, Percent_Identity=24.6575342465753, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787500, Length=249, Percent_Identity=24.0963855421687, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=23.1578947368421, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786703, Length=211, Percent_Identity=27.4881516587678, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787105, Length=197, Percent_Identity=22.3350253807107, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786345, Length=242, Percent_Identity=24.3801652892562, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=23.175965665236, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081782, Length=185, Percent_Identity=26.4864864864865, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787029, Length=202, Percent_Identity=24.7524752475248, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1789873, Length=231, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=226, Percent_Identity=23.0088495575221, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17565586, Length=210, Percent_Identity=25.2380952380952, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193209708, Length=244, Percent_Identity=27.4590163934426, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17567269, Length=273, Percent_Identity=26.7399267399267, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193208177, Length=237, Percent_Identity=28.6919831223629, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI115533592, Length=215, Percent_Identity=24.6511627906977, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=233, Percent_Identity=26.1802575107296, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221512771, Length=208, Percent_Identity=24.5192307692308, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28573571, Length=211, Percent_Identity=22.7488151658768, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28573573, Length=211, Percent_Identity=22.7488151658768, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI116007184, Length=185, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221500365, Length=185, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24643674, Length=234, Percent_Identity=23.5042735042735, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015860
- InterPro:   IPR003593
- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR001452 [H]

Pfam domain/function: PF00005 ABC_tran; PF08239 SH3_3 [H]

EC number: =3.6.3.40 [H]

Molecular weight: Translated: 33022; Mature: 33022

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQVKFENVSKRYTLYNKQSDKLKEIFFSKAGGKQFYALRNVTFEVPPGEVVGIIGINGS
CEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECEEEECCCCCEEEEEEECCC
GKSTMSNLLADVMPPTHGKIELHGKTALIAISSGLNGNLTGLENIELKGLMLGMTKQEII
CHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCEEECEEEECCCHHHHH
DLTPAIIEFADIGDFINQPVKTYSSGMKSRLGFAISINVDPDILVIDEALSVGDQTFTDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECHHHCCCHHHHHH
CLAKMNEFKDRGKTIFFISHSVSQVRQFCTLGLWLEFGEVREYGPVDEVVREYNKFLKWF
HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RNLSKEQQDSFKADKLKRRTTVVDATELGETYILPPLTEEQLQTRHSSVAVSNEA
HHHCHHHHHHHHHHHHHHHHHEEEHHHCCCEEECCCCCHHHHHHHHHHEEECCCC
>Mature Secondary Structure
MYQVKFENVSKRYTLYNKQSDKLKEIFFSKAGGKQFYALRNVTFEVPPGEVVGIIGINGS
CEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECEEEECCCCCEEEEEEECCC
GKSTMSNLLADVMPPTHGKIELHGKTALIAISSGLNGNLTGLENIELKGLMLGMTKQEII
CHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCEEECEEEECCCHHHHH
DLTPAIIEFADIGDFINQPVKTYSSGMKSRLGFAISINVDPDILVIDEALSVGDQTFTDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECHHHCCCHHHHHH
CLAKMNEFKDRGKTIFFISHSVSQVRQFCTLGLWLEFGEVREYGPVDEVVREYNKFLKWF
HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RNLSKEQQDSFKADKLKRRTTVVDATELGETYILPPLTEEQLQTRHSSVAVSNEA
HHHCHHHHHHHHHHHHHHHHHEEEHHHCCCEEECCCCCHHHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA