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The map label for this gene is rpfG [H]

Identifier: 229916727

GI number: 229916727

Start: 943978

End: 945213

Strand: Reverse

Name: rpfG [H]

Synonym: EAT1b_1000

Alternate gene names: 229916727

Gene position: 945213-943978 (Counterclockwise)

Preceding gene: 229916728

Following gene: 229916725

Centisome position: 31.51

GC content: 52.27

Gene sequence:

>1236_bases
ATGGCAACTTCGCACGAATCATTGACGTTACAGTTACAACAACAAGAGCGACTCCATCACCTGCTTTCGTCACTCCTCAA
TCGCTTTTTGACAACAGAGATTGCGGATTTCAAAAAGCGGGTTGACCAATCGCTAGCCGAACTCGGACATTATTTCGCGG
TCGACCGCGTCTATGTCTTCGATTACGATTTTACGAATCAAGTCTGCCACAACACATTCGAATGGTGCGCTGAAGGAATC
ACGGCTGAAATGGACAATCTTCAAGACGTGCCGATTGATGTGCTGCCCGAGTGGGTGAATACCCATGTGGCAGGTGAGAC
GATGTATATTCCACGGGTCGCCGATCTACCTGAAGGAAGCGCCGTCCGCGCCATCTTAGAACCGCAAGCGATTCAAAGTT
TGCTCGCGGTCCCGATGATGCAAGGAAAGTCGTGTCAGGGATTTGTCGGGTTTGATTCCGTCATCTCGGAACGGACGTAC
ACGGAGTATGAACAACAGGCACTACAAGACTTCAGCAATGCGCTACTCGGTGCGGTCGAGCGACACCGTATCGAGGCGGG
ACGGGAAGAAGCGCAACGTGTCCTTGCCGAGCGCGAAAAAGAGTTGATCGATTATCAAGAGGGGCTTGTCCGCACCCTGT
TACGCCTCTCCGCACTCCGTAACAACGAGACGGGGAACCATATCGAGCGGGTGCAAGATCTGTCGACGTTGTTCGCGACG
ATTTTATACGATCACCATCATCCGGACGCCACGCCGCTCTTCATCGAAGGGATCCGTCTCGCGGCACCGCTCCATGACAT
CGGCAAAATCTCTGTTCCGGACGCGATTTTACTCAAAGCAAATAAACTGTCCGACCAGGAATGGGTGTTCATGCGCGACC
ACGTGCGTGTCGGCGGCGAAGTGTTGAAAGATTTGCAGATGCAGTTCCCTCAGAACTACTTCATTCAAATGGCCTATCAC
ATCGCACTGTATCATCACGAACGTTGGGACGGAACGGGGTACAATCAAGGACTGAAAGGGGAGGACATCCCGCTTGCGGC
TCGAATCGTCACCATCATCGACGTCTATGACGCGCTGCGGACGGTCCGCCCGTATAAACCGGCCTATTCTCATGAGGATG
CGATTCTTGCGATGCGAGATATGGAAGGGGCGTTCGACCCGACCTTGTTCGAGTTATTCCTGCTACATCAAGAAGAAATC
GCCATTATGTTCGATCAGACATTTAAAGCCCACTAA

Upstream 100 bases:

>100_bases
GTTTTTCAAATGGATAAACTAGGATAAAAAAACTGAAAATTGGGTAAAATAAGTGCATGGAATGAATGCATGTATTTGAA
CGATAAGGGAGGTTTGGCAC

Downstream 100 bases:

>100_bases
TAAAGGAGACGCTCCCCGAGGGAACGTCTCCTTTTTGATTAGAACGTTTCAGATGTTGTTTTCGCTTGCATGTGGAGTTG
GATGTAATCCGGGCCACCTG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MATSHESLTLQLQQQERLHHLLSSLLNRFLTTEIADFKKRVDQSLAELGHYFAVDRVYVFDYDFTNQVCHNTFEWCAEGI
TAEMDNLQDVPIDVLPEWVNTHVAGETMYIPRVADLPEGSAVRAILEPQAIQSLLAVPMMQGKSCQGFVGFDSVISERTY
TEYEQQALQDFSNALLGAVERHRIEAGREEAQRVLAEREKELIDYQEGLVRTLLRLSALRNNETGNHIERVQDLSTLFAT
ILYDHHHPDATPLFIEGIRLAAPLHDIGKISVPDAILLKANKLSDQEWVFMRDHVRVGGEVLKDLQMQFPQNYFIQMAYH
IALYHHERWDGTGYNQGLKGEDIPLAARIVTIIDVYDALRTVRPYKPAYSHEDAILAMRDMEGAFDPTLFELFLLHQEEI
AIMFDQTFKAH

Sequences:

>Translated_411_residues
MATSHESLTLQLQQQERLHHLLSSLLNRFLTTEIADFKKRVDQSLAELGHYFAVDRVYVFDYDFTNQVCHNTFEWCAEGI
TAEMDNLQDVPIDVLPEWVNTHVAGETMYIPRVADLPEGSAVRAILEPQAIQSLLAVPMMQGKSCQGFVGFDSVISERTY
TEYEQQALQDFSNALLGAVERHRIEAGREEAQRVLAEREKELIDYQEGLVRTLLRLSALRNNETGNHIERVQDLSTLFAT
ILYDHHHPDATPLFIEGIRLAAPLHDIGKISVPDAILLKANKLSDQEWVFMRDHVRVGGEVLKDLQMQFPQNYFIQMAYH
IALYHHERWDGTGYNQGLKGEDIPLAARIVTIIDVYDALRTVRPYKPAYSHEDAILAMRDMEGAFDPTLFELFLLHQEEI
AIMFDQTFKAH
>Mature_410_residues
ATSHESLTLQLQQQERLHHLLSSLLNRFLTTEIADFKKRVDQSLAELGHYFAVDRVYVFDYDFTNQVCHNTFEWCAEGIT
AEMDNLQDVPIDVLPEWVNTHVAGETMYIPRVADLPEGSAVRAILEPQAIQSLLAVPMMQGKSCQGFVGFDSVISERTYT
EYEQQALQDFSNALLGAVERHRIEAGREEAQRVLAEREKELIDYQEGLVRTLLRLSALRNNETGNHIERVQDLSTLFATI
LYDHHHPDATPLFIEGIRLAAPLHDIGKISVPDAILLKANKLSDQEWVFMRDHVRVGGEVLKDLQMQFPQNYFIQMAYHI
ALYHHERWDGTGYNQGLKGEDIPLAARIVTIIDVYDALRTVRPYKPAYSHEDAILAMRDMEGAFDPTLFELFLLHQEEIA
IMFDQTFKAH

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 47107; Mature: 46976

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSHESLTLQLQQQERLHHLLSSLLNRFLTTEIADFKKRVDQSLAELGHYFAVDRVYVF
CCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
DYDFTNQVCHNTFEWCAEGITAEMDNLQDVPIDVLPEWVNTHVAGETMYIPRVADLPEGS
ECCCHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCC
AVRAILEPQAIQSLLAVPMMQGKSCQGFVGFDSVISERTYTEYEQQALQDFSNALLGAVE
HHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHRIEAGREEAQRVLAEREKELIDYQEGLVRTLLRLSALRNNETGNHIERVQDLSTLFAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ILYDHHHPDATPLFIEGIRLAAPLHDIGKISVPDAILLKANKLSDQEWVFMRDHVRVGGE
HHHHCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCEEEECCCCCCCCEEEEHHHHHHHHH
VLKDLQMQFPQNYFIQMAYHIALYHHERWDGTGYNQGLKGEDIPLAARIVTIIDVYDALR
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TVRPYKPAYSHEDAILAMRDMEGAFDPTLFELFLLHQEEIAIMFDQTFKAH
HCCCCCCCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHEEEECCHHCCC
>Mature Secondary Structure 
ATSHESLTLQLQQQERLHHLLSSLLNRFLTTEIADFKKRVDQSLAELGHYFAVDRVYVF
CCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
DYDFTNQVCHNTFEWCAEGITAEMDNLQDVPIDVLPEWVNTHVAGETMYIPRVADLPEGS
ECCCHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCC
AVRAILEPQAIQSLLAVPMMQGKSCQGFVGFDSVISERTYTEYEQQALQDFSNALLGAVE
HHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHRIEAGREEAQRVLAEREKELIDYQEGLVRTLLRLSALRNNETGNHIERVQDLSTLFAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ILYDHHHPDATPLFIEGIRLAAPLHDIGKISVPDAILLKANKLSDQEWVFMRDHVRVGGE
HHHHCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCEEEECCCCCCCCEEEEHHHHHHHHH
VLKDLQMQFPQNYFIQMAYHIALYHHERWDGTGYNQGLKGEDIPLAARIVTIIDVYDALR
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TVRPYKPAYSHEDAILAMRDMEGAFDPTLFELFLLHQEEIAIMFDQTFKAH
HCCCCCCCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]