| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916725
Identifier: 229916725
GI number: 229916725
Start: 941420
End: 942223
Strand: Reverse
Name: 229916725
Synonym: EAT1b_0998
Alternate gene names: NA
Gene position: 942223-941420 (Counterclockwise)
Preceding gene: 229916727
Following gene: 229916724
Centisome position: 31.41
GC content: 54.85
Gene sequence:
>804_bases ATGAAAAAATGGTTCATTCCGCTACTCCTTGTCCTCATGCTCGGGGCATGTGGAAACGAGGGAGAGACGGTGGTAGAAGA GACAGACCGCGCATTGCCGGACGCTGTCACGGAAGTGTACGCAGACTATCAGACGGCGCTCGAGTCTGGAGATGCCGAGG CACTCGCCTCGATCGATTATGCTGGCCGGTTGACTGAGATTCCGGCGACTGGGGCTGTCACCCGTCAATTGTCCCCTGGT GAGATTTATAAGAGCTGGGTGAATGAAGAGGAAGACGTGGCGTTCCTTGTCCATGAGATGACCGATGAAGAAGGGAACCC GCTCCCGAACCGGCTCAGTAAAGTAGCCGTGAAGGAAGGGGATGAGTGGTCACTCGTCATCACGCCGGCCGCTTTACCGA AAGACGTGATTGCCGAGGTCGGGGAGTTGCTCATCGGGGTCCAGGCGAACGAGTACGGAGTGAATGCTGAAGCGAACGCC CGGCTCGCCGAGATTCCGGAAGATGAGGCTGGTCCGATCTATGACCGAGTCAACGCACAGACGGACTATATGGCGCTCGA GGCAGACAATAACGTCTTCCTACTCATGGCGGAAACGTTGACGGTCGAGGAGAACCAAACCATCATGACCGACTATTTCA AAGCGTATGAGACGTGGTACACGGGTAACGAGGAGACGCTCCGAAAAGCGGCTGCAACGGAAGATCCAGTCGAGTATATC GAAGTGCTTGACCCGTTAAAGACAAAACTAGAAGAAGCAATCGATGGCTTTGACGAACAACTCGTCGACCCGTCGTTTGG CTAA
Upstream 100 bases:
>100_bases AATCCTAGTGAAACAATTTTCCAGAAACACATGGCATTGGAGCGAGAAATCGAGTCATGGTAGGATGGGGGAGAACACGG CTTTAGAAAGGACGAACAAC
Downstream 100 bases:
>100_bases GGAGGAACAGCAGATGCTCGCACCAACATTTTCATTACCGAACCAAAATGGAGAAATGGTTTCATTAAAGGACTATCTCG GCAAGAAAGTCGTCTTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKKWFIPLLLVLMLGACGNEGETVVEETDRALPDAVTEVYADYQTALESGDAEALASIDYAGRLTEIPATGAVTRQLSPG EIYKSWVNEEEDVAFLVHEMTDEEGNPLPNRLSKVAVKEGDEWSLVITPAALPKDVIAEVGELLIGVQANEYGVNAEANA RLAEIPEDEAGPIYDRVNAQTDYMALEADNNVFLLMAETLTVEENQTIMTDYFKAYETWYTGNEETLRKAAATEDPVEYI EVLDPLKTKLEEAIDGFDEQLVDPSFG
Sequences:
>Translated_267_residues MKKWFIPLLLVLMLGACGNEGETVVEETDRALPDAVTEVYADYQTALESGDAEALASIDYAGRLTEIPATGAVTRQLSPG EIYKSWVNEEEDVAFLVHEMTDEEGNPLPNRLSKVAVKEGDEWSLVITPAALPKDVIAEVGELLIGVQANEYGVNAEANA RLAEIPEDEAGPIYDRVNAQTDYMALEADNNVFLLMAETLTVEENQTIMTDYFKAYETWYTGNEETLRKAAATEDPVEYI EVLDPLKTKLEEAIDGFDEQLVDPSFG >Mature_267_residues MKKWFIPLLLVLMLGACGNEGETVVEETDRALPDAVTEVYADYQTALESGDAEALASIDYAGRLTEIPATGAVTRQLSPG EIYKSWVNEEEDVAFLVHEMTDEEGNPLPNRLSKVAVKEGDEWSLVITPAALPKDVIAEVGELLIGVQANEYGVNAEANA RLAEIPEDEAGPIYDRVNAQTDYMALEADNNVFLLMAETLTVEENQTIMTDYFKAYETWYTGNEETLRKAAATEDPVEYI EVLDPLKTKLEEAIDGFDEQLVDPSFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29449; Mature: 29449
Theoretical pI: Translated: 3.72; Mature: 3.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWFIPLLLVLMLGACGNEGETVVEETDRALPDAVTEVYADYQTALESGDAEALASIDY CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AGRLTEIPATGAVTRQLSPGEIYKSWVNEEEDVAFLVHEMTDEEGNPLPNRLSKVAVKEG CCCEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCC DEWSLVITPAALPKDVIAEVGELLIGVQANEYGVNAEANARLAEIPEDEAGPIYDRVNAQ CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHCCCC TDYMALEADNNVFLLMAETLTVEENQTIMTDYFKAYETWYTGNEETLRKAAATEDPVEYI CCEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHH EVLDPLKTKLEEAIDGFDEQLVDPSFG HHHHHHHHHHHHHHCCHHHHHCCCCCC >Mature Secondary Structure MKKWFIPLLLVLMLGACGNEGETVVEETDRALPDAVTEVYADYQTALESGDAEALASIDY CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AGRLTEIPATGAVTRQLSPGEIYKSWVNEEEDVAFLVHEMTDEEGNPLPNRLSKVAVKEG CCCEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCC DEWSLVITPAALPKDVIAEVGELLIGVQANEYGVNAEANARLAEIPEDEAGPIYDRVNAQ CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHCCCC TDYMALEADNNVFLLMAETLTVEENQTIMTDYFKAYETWYTGNEETLRKAAATEDPVEYI CCEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHH EVLDPLKTKLEEAIDGFDEQLVDPSFG HHHHHHHHHHHHHHCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA