Click here to switch to the map view.

The map label for this gene is degV [H]

Identifier: 229916669

GI number: 229916669

Start: 890004

End: 890852

Strand: Reverse

Name: degV [H]

Synonym: EAT1b_0941

Alternate gene names: 229916669

Gene position: 890852-890004 (Counterclockwise)

Preceding gene: 229916670

Following gene: 229916668

Centisome position: 29.7

GC content: 54.77

Gene sequence:

>849_bases
ATGGGAAACATTGCGATTTTAACCGACAGTACCGCCTATCTGTCGGATGATTTTTTGGCGCGACATGACGTCCATGTCGC
ACCACTCAGTGTCATCTTCGATGGCGCGTCGTACCGCGAGTCGATTGATATGTCGACCGAGGCGTTTTATGAGCGTATCG
AGGCGGGTAACCTGCCGACGACGTCGCAACCGGTCATCGGTGAGACGGTCGAATTGATTGAGAGCTTGCCGGACGATGTG
ACGGACGTGATTGCGATCACGCTCTCCAGTGGAATCAGCGGAACGTACCAATCGATGGTCGCGCTAAATGACATGGTCGA
TGTGACGGTTCATGCGTTTGACTCAGAGATTTCGTGTATGCCGCAAGCGTTCATGGTCGAAGAGGCCCTTCACCTCCGTG
ACAACGGGGCGACACCAGAAGAAATCATCGCCCGACTTGAAACGGTCCGTGATTCGATTCGCGCGTACTTCGTCGTCGAT
GACCTCGACCATTTGCAACGCGGTGGACGGTTGAGCGCGGCGCAAGCGCTCGTCGGATCGTTCTTACAGATCAAGCCGGT
CCTTCATTTCCAGGATAAATTGATCGTCCCGTTCGAGAAGATTCGGACGTACAAGAAGGCTGTGCGCCGAATCGAAGAGA
TGATGGACGAATCGATTGCCGGGGACGGTGAAGGCTACTGCATCGGCATCATTCACGCCAACTGCCCGGAGCGTCAGGCG
GAAGAAATCGCTTCGATGAAACAGAAGTTCCCGAAAGCACACATCTCGGGAAGCCATTTCGGTCCCGTCATCGGAACGCA
TCTCGGACCTGGTGCAATCGGCATCACGTGGTATCGTCGCGAATGGTAA

Upstream 100 bases:

>100_bases
TTTGAGCGTCACCGATGCTTTACCTCGTTTTTGTGTTACAATATGGAATGGAATCCTAACATAATTGGAAAAATGAAACG
ACGTAAAGTGAGGATATAGT

Downstream 100 bases:

>100_bases
GAGAGACGACCGTCTAAGGTCGTCTTTTTCAATGGAGGAGGGAATGTGATGGCGAAATATCGCCAAATCTTTGAGCGTCT
GGCAGAAGAGATGCGAAATG

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MGNIAILTDSTAYLSDDFLARHDVHVAPLSVIFDGASYRESIDMSTEAFYERIEAGNLPTTSQPVIGETVELIESLPDDV
TDVIAITLSSGISGTYQSMVALNDMVDVTVHAFDSEISCMPQAFMVEEALHLRDNGATPEEIIARLETVRDSIRAYFVVD
DLDHLQRGGRLSAAQALVGSFLQIKPVLHFQDKLIVPFEKIRTYKKAVRRIEEMMDESIAGDGEGYCIGIIHANCPERQA
EEIASMKQKFPKAHISGSHFGPVIGTHLGPGAIGITWYRREW

Sequences:

>Translated_282_residues
MGNIAILTDSTAYLSDDFLARHDVHVAPLSVIFDGASYRESIDMSTEAFYERIEAGNLPTTSQPVIGETVELIESLPDDV
TDVIAITLSSGISGTYQSMVALNDMVDVTVHAFDSEISCMPQAFMVEEALHLRDNGATPEEIIARLETVRDSIRAYFVVD
DLDHLQRGGRLSAAQALVGSFLQIKPVLHFQDKLIVPFEKIRTYKKAVRRIEEMMDESIAGDGEGYCIGIIHANCPERQA
EEIASMKQKFPKAHISGSHFGPVIGTHLGPGAIGITWYRREW
>Mature_281_residues
GNIAILTDSTAYLSDDFLARHDVHVAPLSVIFDGASYRESIDMSTEAFYERIEAGNLPTTSQPVIGETVELIESLPDDVT
DVIAITLSSGISGTYQSMVALNDMVDVTVHAFDSEISCMPQAFMVEEALHLRDNGATPEEIIARLETVRDSIRAYFVVDD
LDHLQRGGRLSAAQALVGSFLQIKPVLHFQDKLIVPFEKIRTYKKAVRRIEEMMDESIAGDGEGYCIGIIHANCPERQAE
EIASMKQKFPKAHISGSHFGPVIGTHLGPGAIGITWYRREW

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31141; Mature: 31010

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIAILTDSTAYLSDDFLARHDVHVAPLSVIFDGASYRESIDMSTEAFYERIEAGNLPT
CCCEEEEECCCHHHCCHHHHHCCCCEEEHHHEECCCHHHHHCCCHHHHHHHHHHCCCCCC
TSQPVIGETVELIESLPDDVTDVIAITLSSGISGTYQSMVALNDMVDVTVHAFDSEISCM
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHC
PQAFMVEEALHLRDNGATPEEIIARLETVRDSIRAYFVVDDLDHLQRGGRLSAAQALVGS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEEECHHHHHCCCCHHHHHHHHHH
FLQIKPVLHFQDKLIVPFEKIRTYKKAVRRIEEMMDESIAGDGEGYCIGIIHANCPERQA
HHHHHHHHEECCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHH
EEIASMKQKFPKAHISGSHFGPVIGTHLGPGAIGITWYRREW
HHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
GNIAILTDSTAYLSDDFLARHDVHVAPLSVIFDGASYRESIDMSTEAFYERIEAGNLPT
CCEEEEECCCHHHCCHHHHHCCCCEEEHHHEECCCHHHHHCCCHHHHHHHHHHCCCCCC
TSQPVIGETVELIESLPDDVTDVIAITLSSGISGTYQSMVALNDMVDVTVHAFDSEISCM
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHC
PQAFMVEEALHLRDNGATPEEIIARLETVRDSIRAYFVVDDLDHLQRGGRLSAAQALVGS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEEECHHHHHCCCCHHHHHHHHHH
FLQIKPVLHFQDKLIVPFEKIRTYKKAVRRIEEMMDESIAGDGEGYCIGIIHANCPERQA
HHHHHHHHEECCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHH
EEIASMKQKFPKAHISGSHFGPVIGTHLGPGAIGITWYRREW
HHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377; 3141378 [H]