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The map label for this gene is secA1 [H]

Identifier: 229916624

GI number: 229916624

Start: 851340

End: 853862

Strand: Reverse

Name: secA1 [H]

Synonym: EAT1b_0896

Alternate gene names: 229916624

Gene position: 853862-851340 (Counterclockwise)

Preceding gene: 229916625

Following gene: 229916623

Centisome position: 28.46

GC content: 55.05

Gene sequence:

>2523_bases
ATGGCGAACTTTTTGAAAGAGTTATTTGCTCCACAGAAACGAATGTTGAAAAAAGCAGAGAAAGCGGCCGACTTGATCGA
GTCGTTCGCCGAACCAATCAAGGCATTGTCCGACGAACAGCTCCAGGCGAAGACGGAAGAGTTCCGGGAACGTCTGGCGA
AAGGCGAGACACTTGACGACCTCTTGCCGGAGGCGTTCGCGGTCTGTCGTGAGGCATCGGAGCGTGTGCTCGGGATGCGT
CATTACCGTGTCCAGCTCATCGGGGGCTATGTGCTCCATAACGGCGACATCGCCGAAATGAAAACCGGTGAAGGGAAGAC
GCTCGTCGCGACACTTCCTGTCTACTTGAACGCGCTCACTGGCCGTGGCGTACACGTCGTAACGGTCAACGAATATTTGG
CGAAACGAGATAAAGAACTCATGGAGCCGCTCTACTTCGCACTCGGTCTCTCGGTCGGCCTCAACGTGTCGAACATGGAC
CGTGTCGAGAAACAGGCGGCCTACAACTGTGATATCACGTACTCGACGAACAACGAGCTCGGATTCGACTACCTCCGTGA
CAACATGGTCCTTTATAAGGAAGACCGTGTACAACGCGAGCTCTACTACACGATTGTCGATGAAGTCGACTCGATCCTCG
TCGATGAGGCGCGTACTCCGCTCATCATCTCGGGGTCGGCTCAAAAATCGACAGAACTCTACACACGCGCGGATGCGTTC
GTCCGTACGTTGAAAGAGGAAGACGATTACACGGTCGACGTGAAGACGAAATCGGTCCTCTTGACGGACCAAGGGGTCGA
CCTCGCCGAGAAGTTCTTCGGCATCGACAACCTGTTCGCGATCGAACACGTCGCCGTCAACCACCACGTCGGGCTCGCCC
TTCGTGCGAACGCGGTCATGCATCACGATATCGACTATATGGTACGTGAGGGTCAAGTCATGATCATCGACCAATTCACG
GGTCGTGTCATGGACGGACGCCGCTACTCGGAAGGTCTTCACCAGGCGATCGAGGCGAAAGAAGGCGTCGAGATTCAACG
CGAATCGATGACGCTCGCCACAATCACGTATCAGAACTACTTCCGGATGTATGAGAAGCTTGCCGGGATGACCGGTACGG
CGAAGACAGAGGAAGAAGAGTTCCGTAACATCTACAACATGCAGGTCGTGACGATTCCGACGAACAAACCGATCCTTCGC
GATGACAAGGCAGACCTCATCTTCAAATCGATGGAAGGCAAGTTCAAAGCCGTCGTCGAAGAAATTTCGGCAGTCCACGC
AACGGGACAACCGATTCTCGTCGGTACGGTCGCCGTCGAGACGTCTGAATACTTGAGCAAGCTCTTGACGAAGAAGAAGA
TTCGTCACGATGTCTTGAACGCGAAGAACCACGCCCGTGAGGCGGAAATCATCGAGAACGCCGGTCAAAAAGGTTCCGTC
ACGATTGCGACGAACATGGCTGGTCGTGGTACCGACATCAAGCTCGGAGAAGGTGTCATCGACCTCGGTGGTCTTTACAT
CATCGGGACAGAGCGTCACGAGTCACGCCGAATCGATAACCAGCTTCGCGGTCGTGCGGGTCGTCAAGGGGACCCGGGTA
AATCCCAGTTCTACTTGTCGCTCGAAGACGAGCTCATGCGTCGCTTCGGAACGGATAGCCTCCAAAGCATGATGGAGCGT
CTCGGGATGGATGACACGCAACCGATTGAGAGCCGCATGGTCTCGAAAGCGGTCGAGTCAGCGCAAAAACGTGTTGAAGG
AAACAACTATGATGCGCGGAAGCAGCTTCTCGGTTACGACAACGTCATGGCCGACCAACGGAAGGTCATGTACAAGGACC
GCTCGAGCATCCTCGAGAACGAGTCGGTCACGGATATCGTCCGTTCGATGATGGCGCAGACGGTCGAACTCGGTGTCGGT
CAATACACGCCGATCGAACTCGTACCGGAAGAATGGAACATCGACGAGCTCGCGCACTGGGCCAACCAGACGCTCGCGCT
CGAGAAGACGGTCGAAGGTAAGGACTTCTACGGCAAAGAGCGTGAAGAAATCATCGAACTTCTCATGGAACGCGTGAACG
AACAGTACGAGGCGAAACGTGAACTCGCGCCGCCGGAACGCTTCAACGAGTTCGAGAAGATTATCGTGCTCCGTGCCGTC
GACTCGCACTGGATGGCTCATATCGACCATATGGACCAGTTGCGTCAAGGGATTCATCTCCGCGCCTACGGACAGAACGA
TCCGCTTCGTGAGTACCAAGCGGAAGGGATCAACATGTTCGACGCGATGAACGCGGCGATCTCAGAAGAAGTGACAGGCT
TCGTCCTTCGTGCCGAAGTCGGGGACAACCTTCGTCGTGAGAAAGTGGTCGAAGAGGAAGTCGCCGTCTCAGGCAAGAGC
GATGCGCCGGTCAAGAAAAAGCCGGTCCGTCGTTCGAAAGAAGACAGCATCGGCCGGAACGATCCATGCTGGTGCGGTTC
GGGTAAGAAGTTCAAGAACTGTCACGGTAGACAACAGGCTTAA

Upstream 100 bases:

>100_bases
GTTTCCTTTTGCCTTTCCTTGAAAGGTGGCACCACTTCGGTTAAACTGTACATTAGGGAAAAAACATGCATTTTTTAGTG
AGTGCAGAGGAGATATGAGT

Downstream 100 bases:

>100_bases
TTATTGAAGAGGCGGGTCCGCTCGCCTCTTTCCTACGGAAAGGTGAATCACACTATGGAAATTTCAGATATTCGGAACGA
ACTAGAGGCGATGGCGAAAC

Product: preprotein translocase, SecA subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 840; Mature: 839

Protein sequence:

>840_residues
MANFLKELFAPQKRMLKKAEKAADLIESFAEPIKALSDEQLQAKTEEFRERLAKGETLDDLLPEAFAVCREASERVLGMR
HYRVQLIGGYVLHNGDIAEMKTGEGKTLVATLPVYLNALTGRGVHVVTVNEYLAKRDKELMEPLYFALGLSVGLNVSNMD
RVEKQAAYNCDITYSTNNELGFDYLRDNMVLYKEDRVQRELYYTIVDEVDSILVDEARTPLIISGSAQKSTELYTRADAF
VRTLKEEDDYTVDVKTKSVLLTDQGVDLAEKFFGIDNLFAIEHVAVNHHVGLALRANAVMHHDIDYMVREGQVMIIDQFT
GRVMDGRRYSEGLHQAIEAKEGVEIQRESMTLATITYQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNKPILR
DDKADLIFKSMEGKFKAVVEEISAVHATGQPILVGTVAVETSEYLSKLLTKKKIRHDVLNAKNHAREAEIIENAGQKGSV
TIATNMAGRGTDIKLGEGVIDLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGKSQFYLSLEDELMRRFGTDSLQSMMER
LGMDDTQPIESRMVSKAVESAQKRVEGNNYDARKQLLGYDNVMADQRKVMYKDRSSILENESVTDIVRSMMAQTVELGVG
QYTPIELVPEEWNIDELAHWANQTLALEKTVEGKDFYGKEREEIIELLMERVNEQYEAKRELAPPERFNEFEKIIVLRAV
DSHWMAHIDHMDQLRQGIHLRAYGQNDPLREYQAEGINMFDAMNAAISEEVTGFVLRAEVGDNLRREKVVEEEVAVSGKS
DAPVKKKPVRRSKEDSIGRNDPCWCGSGKKFKNCHGRQQA

Sequences:

>Translated_840_residues
MANFLKELFAPQKRMLKKAEKAADLIESFAEPIKALSDEQLQAKTEEFRERLAKGETLDDLLPEAFAVCREASERVLGMR
HYRVQLIGGYVLHNGDIAEMKTGEGKTLVATLPVYLNALTGRGVHVVTVNEYLAKRDKELMEPLYFALGLSVGLNVSNMD
RVEKQAAYNCDITYSTNNELGFDYLRDNMVLYKEDRVQRELYYTIVDEVDSILVDEARTPLIISGSAQKSTELYTRADAF
VRTLKEEDDYTVDVKTKSVLLTDQGVDLAEKFFGIDNLFAIEHVAVNHHVGLALRANAVMHHDIDYMVREGQVMIIDQFT
GRVMDGRRYSEGLHQAIEAKEGVEIQRESMTLATITYQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNKPILR
DDKADLIFKSMEGKFKAVVEEISAVHATGQPILVGTVAVETSEYLSKLLTKKKIRHDVLNAKNHAREAEIIENAGQKGSV
TIATNMAGRGTDIKLGEGVIDLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGKSQFYLSLEDELMRRFGTDSLQSMMER
LGMDDTQPIESRMVSKAVESAQKRVEGNNYDARKQLLGYDNVMADQRKVMYKDRSSILENESVTDIVRSMMAQTVELGVG
QYTPIELVPEEWNIDELAHWANQTLALEKTVEGKDFYGKEREEIIELLMERVNEQYEAKRELAPPERFNEFEKIIVLRAV
DSHWMAHIDHMDQLRQGIHLRAYGQNDPLREYQAEGINMFDAMNAAISEEVTGFVLRAEVGDNLRREKVVEEEVAVSGKS
DAPVKKKPVRRSKEDSIGRNDPCWCGSGKKFKNCHGRQQA
>Mature_839_residues
ANFLKELFAPQKRMLKKAEKAADLIESFAEPIKALSDEQLQAKTEEFRERLAKGETLDDLLPEAFAVCREASERVLGMRH
YRVQLIGGYVLHNGDIAEMKTGEGKTLVATLPVYLNALTGRGVHVVTVNEYLAKRDKELMEPLYFALGLSVGLNVSNMDR
VEKQAAYNCDITYSTNNELGFDYLRDNMVLYKEDRVQRELYYTIVDEVDSILVDEARTPLIISGSAQKSTELYTRADAFV
RTLKEEDDYTVDVKTKSVLLTDQGVDLAEKFFGIDNLFAIEHVAVNHHVGLALRANAVMHHDIDYMVREGQVMIIDQFTG
RVMDGRRYSEGLHQAIEAKEGVEIQRESMTLATITYQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNKPILRD
DKADLIFKSMEGKFKAVVEEISAVHATGQPILVGTVAVETSEYLSKLLTKKKIRHDVLNAKNHAREAEIIENAGQKGSVT
IATNMAGRGTDIKLGEGVIDLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGKSQFYLSLEDELMRRFGTDSLQSMMERL
GMDDTQPIESRMVSKAVESAQKRVEGNNYDARKQLLGYDNVMADQRKVMYKDRSSILENESVTDIVRSMMAQTVELGVGQ
YTPIELVPEEWNIDELAHWANQTLALEKTVEGKDFYGKEREEIIELLMERVNEQYEAKRELAPPERFNEFEKIIVLRAVD
SHWMAHIDHMDQLRQGIHLRAYGQNDPLREYQAEGINMFDAMNAAISEEVTGFVLRAEVGDNLRREKVVEEEVAVSGKSD
APVKKKPVRRSKEDSIGRNDPCWCGSGKKFKNCHGRQQA

Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secA family [H]

Homologues:

Organism=Escherichia coli, GI1786287, Length=902, Percent_Identity=47.2283813747228, Blast_Score=810, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001650
- InterPro:   IPR004027
- InterPro:   IPR000185
- InterPro:   IPR020937
- InterPro:   IPR011115
- InterPro:   IPR014018
- InterPro:   IPR011130
- InterPro:   IPR011116 [H]

Pfam domain/function: PF00271 Helicase_C; PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]

EC number: NA

Molecular weight: Translated: 95266; Mature: 95134

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS01312 SECA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANFLKELFAPQKRMLKKAEKAADLIESFAEPIKALSDEQLQAKTEEFRERLAKGETLDD
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH
LLPEAFAVCREASERVLGMRHYRVQLIGGYVLHNGDIAEMKTGEGKTLVATLPVYLNALT
HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCEEECCCCCEEEEEHHHHHHHHC
GRGVHVVTVNEYLAKRDKELMEPLYFALGLSVGLNVSNMDRVEKQAAYNCDITYSTNNEL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCC
GFDYLRDNMVLYKEDRVQRELYYTIVDEVDSILVDEARTPLIISGSAQKSTELYTRADAF
CHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH
VRTLKEEDDYTVDVKTKSVLLTDQGVDLAEKFFGIDNLFAIEHVAVNHHVGLALRANAVM
HHHHHCCCCEEEEEEEEEEEEECCCCHHHHHHCCCCCHHHHHHEEECCCCCEEEEECCHH
HHDIDYMVREGQVMIIDQFTGRVMDGRRYSEGLHQAIEAKEGVEIQRESMTLATITYQNY
HCCHHHHCCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHCCCEEECCCEEEEEEHHHHH
FRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNKPILRDDKADLIFKSMEGKFKAVVE
HHHHHHHHCCCCCCCCCHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHH
EISAVHATGQPILVGTVAVETSEYLSKLLTKKKIRHDVLNAKNHAREAEIIENAGQKGSV
HHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
TIATNMAGRGTDIKLGEGVIDLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGKSQFYLS
EEEECCCCCCCCEECCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEE
LEDELMRRFGTDSLQSMMERLGMDDTQPIESRMVSKAVESAQKRVEGNNYDARKQLLGYD
HHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCH
NVMADQRKVMYKDRSSILENESVTDIVRSMMAQTVELGVGQYTPIELVPEEWNIDELAHW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHH
ANQTLALEKTVEGKDFYGKEREEIIELLMERVNEQYEAKRELAPPERFNEFEKIIVLRAV
HCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEH
DSHWMAHIDHMDQLRQGIHLRAYGQNDPLREYQAEGINMFDAMNAAISEEVTGFVLRAEV
HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCEEEEECC
GDNLRREKVVEEEVAVSGKSDAPVKKKPVRRSKEDSIGRNDPCWCGSGKKFKNCHGRQQA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
ANFLKELFAPQKRMLKKAEKAADLIESFAEPIKALSDEQLQAKTEEFRERLAKGETLDD
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH
LLPEAFAVCREASERVLGMRHYRVQLIGGYVLHNGDIAEMKTGEGKTLVATLPVYLNALT
HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCEEECCCCCEEEEEHHHHHHHHC
GRGVHVVTVNEYLAKRDKELMEPLYFALGLSVGLNVSNMDRVEKQAAYNCDITYSTNNEL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCC
GFDYLRDNMVLYKEDRVQRELYYTIVDEVDSILVDEARTPLIISGSAQKSTELYTRADAF
CHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH
VRTLKEEDDYTVDVKTKSVLLTDQGVDLAEKFFGIDNLFAIEHVAVNHHVGLALRANAVM
HHHHHCCCCEEEEEEEEEEEEECCCCHHHHHHCCCCCHHHHHHEEECCCCCEEEEECCHH
HHDIDYMVREGQVMIIDQFTGRVMDGRRYSEGLHQAIEAKEGVEIQRESMTLATITYQNY
HCCHHHHCCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHCCCEEECCCEEEEEEHHHHH
FRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNKPILRDDKADLIFKSMEGKFKAVVE
HHHHHHHHCCCCCCCCCHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHH
EISAVHATGQPILVGTVAVETSEYLSKLLTKKKIRHDVLNAKNHAREAEIIENAGQKGSV
HHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
TIATNMAGRGTDIKLGEGVIDLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGKSQFYLS
EEEECCCCCCCCEECCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEE
LEDELMRRFGTDSLQSMMERLGMDDTQPIESRMVSKAVESAQKRVEGNNYDARKQLLGYD
HHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCH
NVMADQRKVMYKDRSSILENESVTDIVRSMMAQTVELGVGQYTPIELVPEEWNIDELAHW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHH
ANQTLALEKTVEGKDFYGKEREEIIELLMERVNEQYEAKRELAPPERFNEFEKIIVLRAV
HCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEH
DSHWMAHIDHMDQLRQGIHLRAYGQNDPLREYQAEGINMFDAMNAAISEEVTGFVLRAEV
HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCEEEEECC
GDNLRREKVVEEEVAVSGKSDAPVKKKPVRRSKEDSIGRNDPCWCGSGKKFKNCHGRQQA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA