The gene/protein map for NC_003909 is currently unavailable.
Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is yvdB [H]

Identifier: 229916559

GI number: 229916559

Start: 787336

End: 788895

Strand: Reverse

Name: yvdB [H]

Synonym: EAT1b_0830

Alternate gene names: 229916559

Gene position: 788895-787336 (Counterclockwise)

Preceding gene: 229916560

Following gene: 229916556

Centisome position: 26.3

GC content: 58.14

Gene sequence:

>1560_bases
ATGATGCAAGACTCACTCTCCACGCGTGAGATGTGGCAAAAGGATATCTCAGCCGGAATCACGGTCGGTGTCGTCGCCAT
CCCGCTCGCCATGGCATTTGCCATCGCCTCAGGGGTCCCGCCGGTGTATGGGCTCTACACGTCCATTTTTGCCGGAATCC
TCGTCAGCCTGTTCGGGGGTTCGACGTTTCAAATTGCCGGACCGACGGGAGCGTTCATCCCAATCGTCTCGGGTGTCGTC
CTCGCATATGGATATGAAGGGTTACTCGTCACGACCGTTCTCGCCGGAATTTTGCTGCTCCTCATGAGCGTGCTTCGGGT
CGGACGGCTCATCCGTTTCATGCCTCGTGCCGTCACGATTGGCTTCACGGCTGGGATCGCGGTCGTCATCTTCGTCGACC
AGCTCGATGAATTGTTCGGGGTCACGTTTGAGAAGGCACCACATTTTCACGAGAACTTGCTTCGTCTCGGTCAAGCGTTG
CCCGAAGCGAGCCCTTGGCCGATTGTCATTGCTGGGATTGGCTTTTTGACGCTTTGGATCATCCCAAAGCTGCCGTTCCG
TTTACCGCTCTTACTCATGGCGATGCTCGTCCCGACGTTTGTCAGTCTCCTCATCCCGGGTGAGGTCGCGACGATCGGAA
GTGCCTACGGCGGTATCCCGAGCGGACTGCCGGAATTCAAATGGCTTGCGATCGACATCAACCTGATCACGACGCTCCTC
CCGTCCGCATTCGCCATCGCCTTCCTCGGTGCACTCGAGTCACTTCTTTCGGGAACGGTCGCCGACGGGATGGCAGGGAC
GAAGATGAAGCCGGACAAGGAACTGCTCGGGCAAGGGCTTGCGAACGTGATCACACCGTTCTTTGGTGGGATCCCGTCGA
CAGGTGCCATCGCCCGGACGGCAACAAACATTCAGGCGGGAGCGGTCAGCCGACGTGCCGGTGTCATCCACGGGATCACG
GTCCTCATTGCGGTCTTAGTCCTCGCGCCGTTCGCGAGTTACGTGCCACTCGCTGCACTCGCTCCGATCTTGATGCGGGT
CGCCTGGAACATGTCCGAACGCCATCACGTGATGGCGATGTTGCGTCATCGTTCATCCGAGTCGCTCGTCCTTCTTGTCA
CATTACTATTGACGGTATTTGTCGACTTGGTCGTCGCCGTCGAGGTCGGCGTCATCTGTGCGCTCGCGCTCTTTGCGAAA
CGAATGGCCGATACGATTGACGTGCGTGAACGGACAGAACGGTACGTCACACGAGACGGCCAAATCGTCTTCAGTGTCGA
AGGTCCGCTCTTCTTCGGTGCGGTCGAGTTGTTCGAGCACGTCCTCCATCACATTCATCGGGAACCGAACGTGTTCATCT
TCAACTTTCATCGTTGTCCCGTCATCGACGTGACCGCGGTCGAAGAGTTGCGGCGTGTCGTCACCGAGCTGAAAGCAGCC
GACCGGCATGTCATCTTCGCGCACCTGTCGCCCTCGGTCCGCGCGACGCTTGCTCACTATGGGCTACTCGACGTGATTGA
AACGTTCGAGACGACCCAGGAAGCGATCGAGGCATCTTAA

Upstream 100 bases:

>100_bases
CTTTTGTACATTCTGTTAACGTTTTTCTCAATCCGTTTACAATCCCTCTTTCCAGGCGTACACTGAACTCGTTTTTGAAC
TGATTGGAAAGAAGGAATGT

Downstream 100 bases:

>100_bases
CGAACGGACAAGATGTCGCCGAATGGGACGCGGCGCACTTTGCCATCGAACAGCTCGACCTCGCGCTCGGCGTAATAGAT
GGCATGGACGTAGCCGCGCA

Product: sulphate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MMQDSLSTREMWQKDISAGITVGVVAIPLAMAFAIASGVPPVYGLYTSIFAGILVSLFGGSTFQIAGPTGAFIPIVSGVV
LAYGYEGLLVTTVLAGILLLLMSVLRVGRLIRFMPRAVTIGFTAGIAVVIFVDQLDELFGVTFEKAPHFHENLLRLGQAL
PEASPWPIVIAGIGFLTLWIIPKLPFRLPLLLMAMLVPTFVSLLIPGEVATIGSAYGGIPSGLPEFKWLAIDINLITTLL
PSAFAIAFLGALESLLSGTVADGMAGTKMKPDKELLGQGLANVITPFFGGIPSTGAIARTATNIQAGAVSRRAGVIHGIT
VLIAVLVLAPFASYVPLAALAPILMRVAWNMSERHHVMAMLRHRSSESLVLLVTLLLTVFVDLVVAVEVGVICALALFAK
RMADTIDVRERTERYVTRDGQIVFSVEGPLFFGAVELFEHVLHHIHREPNVFIFNFHRCPVIDVTAVEELRRVVTELKAA
DRHVIFAHLSPSVRATLAHYGLLDVIETFETTQEAIEAS

Sequences:

>Translated_519_residues
MMQDSLSTREMWQKDISAGITVGVVAIPLAMAFAIASGVPPVYGLYTSIFAGILVSLFGGSTFQIAGPTGAFIPIVSGVV
LAYGYEGLLVTTVLAGILLLLMSVLRVGRLIRFMPRAVTIGFTAGIAVVIFVDQLDELFGVTFEKAPHFHENLLRLGQAL
PEASPWPIVIAGIGFLTLWIIPKLPFRLPLLLMAMLVPTFVSLLIPGEVATIGSAYGGIPSGLPEFKWLAIDINLITTLL
PSAFAIAFLGALESLLSGTVADGMAGTKMKPDKELLGQGLANVITPFFGGIPSTGAIARTATNIQAGAVSRRAGVIHGIT
VLIAVLVLAPFASYVPLAALAPILMRVAWNMSERHHVMAMLRHRSSESLVLLVTLLLTVFVDLVVAVEVGVICALALFAK
RMADTIDVRERTERYVTRDGQIVFSVEGPLFFGAVELFEHVLHHIHREPNVFIFNFHRCPVIDVTAVEELRRVVTELKAA
DRHVIFAHLSPSVRATLAHYGLLDVIETFETTQEAIEAS
>Mature_519_residues
MMQDSLSTREMWQKDISAGITVGVVAIPLAMAFAIASGVPPVYGLYTSIFAGILVSLFGGSTFQIAGPTGAFIPIVSGVV
LAYGYEGLLVTTVLAGILLLLMSVLRVGRLIRFMPRAVTIGFTAGIAVVIFVDQLDELFGVTFEKAPHFHENLLRLGQAL
PEASPWPIVIAGIGFLTLWIIPKLPFRLPLLLMAMLVPTFVSLLIPGEVATIGSAYGGIPSGLPEFKWLAIDINLITTLL
PSAFAIAFLGALESLLSGTVADGMAGTKMKPDKELLGQGLANVITPFFGGIPSTGAIARTATNIQAGAVSRRAGVIHGIT
VLIAVLVLAPFASYVPLAALAPILMRVAWNMSERHHVMAMLRHRSSESLVLLVTLLLTVFVDLVVAVEVGVICALALFAK
RMADTIDVRERTERYVTRDGQIVFSVEGPLFFGAVELFEHVLHHIHREPNVFIFNFHRCPVIDVTAVEELRRVVTELKAA
DRHVIFAHLSPSVRATLAHYGLLDVIETFETTQEAIEAS

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI16306483, Length=615, Percent_Identity=22.4390243902439, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI20336282, Length=615, Percent_Identity=22.4390243902439, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4557535, Length=498, Percent_Identity=25.3012048192771, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI94721259, Length=468, Percent_Identity=23.2905982905983, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI94721255, Length=468, Percent_Identity=23.2905982905983, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI94721253, Length=468, Percent_Identity=23.2905982905983, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI94721257, Length=468, Percent_Identity=23.2905982905983, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI45827800, Length=484, Percent_Identity=21.900826446281, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI39752683, Length=484, Percent_Identity=21.900826446281, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI45827802, Length=422, Percent_Identity=23.2227488151659, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI4505697, Length=379, Percent_Identity=22.9551451187335, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI269784651, Length=352, Percent_Identity=23.2954545454545, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI16418457, Length=428, Percent_Identity=22.6635514018692, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI301601599, Length=428, Percent_Identity=22.6635514018692, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI262206105, Length=155, Percent_Identity=37.4193548387097, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI262206075, Length=155, Percent_Identity=37.4193548387097, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI262206069, Length=155, Percent_Identity=37.4193548387097, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI262206063, Length=155, Percent_Identity=37.4193548387097, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI65506789, Length=564, Percent_Identity=24.645390070922, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI47131207, Length=516, Percent_Identity=23.4496124031008, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI20336272, Length=516, Percent_Identity=23.4496124031008, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI100913030, Length=504, Percent_Identity=22.2222222222222, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI87081859, Length=494, Percent_Identity=43.3198380566802, Blast_Score=305, Evalue=6e-84,
Organism=Caenorhabditis elegans, GI86564196, Length=604, Percent_Identity=24.5033112582781, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17566848, Length=547, Percent_Identity=24.1316270566728, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI86565215, Length=573, Percent_Identity=21.8150087260035, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17562578, Length=498, Percent_Identity=24.2971887550201, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193203292, Length=506, Percent_Identity=21.3438735177866, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI86565213, Length=162, Percent_Identity=28.3950617283951, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6325260, Length=563, Percent_Identity=23.9786856127886, Blast_Score=88, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6323121, Length=215, Percent_Identity=24.6511627906977, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI85815873, Length=500, Percent_Identity=25, Blast_Score=115, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24649801, Length=551, Percent_Identity=23.956442831216, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24663084, Length=464, Percent_Identity=22.6293103448276, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21357695, Length=464, Percent_Identity=22.6293103448276, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI19922482, Length=419, Percent_Identity=25.7756563245823, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI21358229, Length=528, Percent_Identity=25, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24647160, Length=140, Percent_Identity=33.5714285714286, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355087, Length=140, Percent_Identity=32.8571428571429, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666186, Length=262, Percent_Identity=24.8091603053435, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24651449, Length=134, Percent_Identity=29.8507462686567, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 55857; Mature: 55857

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQDSLSTREMWQKDISAGITVGVVAIPLAMAFAIASGVPPVYGLYTSIFAGILVSLFGG
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
STFQIAGPTGAFIPIVSGVVLAYGYEGLLVTTVLAGILLLLMSVLRVGRLIRFMPRAVTI
CEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
GFTAGIAVVIFVDQLDELFGVTFEKAPHFHENLLRLGQALPEASPWPIVIAGIGFLTLWI
HHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHH
IPKLPFRLPLLLMAMLVPTFVSLLIPGEVATIGSAYGGIPSGLPEFKWLAIDINLITTLL
HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHH
PSAFAIAFLGALESLLSGTVADGMAGTKMKPDKELLGQGLANVITPFFGGIPSTGAIART
HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ATNIQAGAVSRRAGVIHGITVLIAVLVLAPFASYVPLAALAPILMRVAWNMSERHHVMAM
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LRHRSSESLVLLVTLLLTVFVDLVVAVEVGVICALALFAKRMADTIDVRERTERYVTRDG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QIVFSVEGPLFFGAVELFEHVLHHIHREPNVFIFNFHRCPVIDVTAVEELRRVVTELKAA
CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHC
DRHVIFAHLSPSVRATLAHYGLLDVIETFETTQEAIEAS
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMQDSLSTREMWQKDISAGITVGVVAIPLAMAFAIASGVPPVYGLYTSIFAGILVSLFGG
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
STFQIAGPTGAFIPIVSGVVLAYGYEGLLVTTVLAGILLLLMSVLRVGRLIRFMPRAVTI
CEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
GFTAGIAVVIFVDQLDELFGVTFEKAPHFHENLLRLGQALPEASPWPIVIAGIGFLTLWI
HHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHH
IPKLPFRLPLLLMAMLVPTFVSLLIPGEVATIGSAYGGIPSGLPEFKWLAIDINLITTLL
HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHH
PSAFAIAFLGALESLLSGTVADGMAGTKMKPDKELLGQGLANVITPFFGGIPSTGAIART
HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ATNIQAGAVSRRAGVIHGITVLIAVLVLAPFASYVPLAALAPILMRVAWNMSERHHVMAM
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LRHRSSESLVLLVTLLLTVFVDLVVAVEVGVICALALFAKRMADTIDVRERTERYVTRDG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QIVFSVEGPLFFGAVELFEHVLHHIHREPNVFIFNFHRCPVIDVTAVEELRRVVTELKAA
CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHC
DRHVIFAHLSPSVRATLAHYGLLDVIETFETTQEAIEAS
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]