| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is secA2 [H]
Identifier: 229916556
GI number: 229916556
Start: 783098
End: 785464
Strand: Reverse
Name: secA2 [H]
Synonym: EAT1b_0827
Alternate gene names: 229916556
Gene position: 785464-783098 (Counterclockwise)
Preceding gene: 229916559
Following gene: 229916555
Centisome position: 26.18
GC content: 53.99
Gene sequence:
>2367_bases GTGATCCAATTTGTAAAACAGTTAACGAATGATCAAAGCCGGCGTTTGAAAGCGTACGAACGACGGGTCGCGCGTATTAA TGAATTAGAGACAACGATGAAAGCCCTCTCGGATGACGAGATGCGTACATATACGGAGACGCTCAAAGCACGTCTCTTGG ATGGAAAGAAAGTGGATGACATCGCAGAAGAAGGGTTCGCTCTCGTCCGCGAAGCGTCAGTCCGTGTGCTCGGCATGCGT CACTATGACGTCCAGCTCATCGGTGGGTTCGCCCTCCTCGAAGGAAACATCTCGGAGATGCCGACGGGGGAAGGGAAGAC GCTCGTCGCCGCTTTGCCGAGTTATGTCAAGGCGCTCGAAGGAAAAGGCGTCCACGTCATCACGGTGAACGATTATTTGG CGAGACGTGATGCGGAACAAATTGGGAAGATTCACGACTTCCTCGGGTTGACGGTCGGCTTGAACGTCCCGGACATCGAA GCGGATGAGAAGCGTTCCGCATATCAGGCGGACATCACGTATGGGGTCGGGACAGAGTTCGGATTCGACTACTTGCGTGA CAACCTTGTCCATAAGCCGGAAGAACGGGTCCAACGTCCGTTCCATTTCGCCATCGTCGATGAAGTCGACAGCATCTTGA TCGATGAGGCGAAGACGCCGCTCATCATCGCGCAGAAGGACCGGTCACATATCCGGTTGAAACAGTTGGCGCAACAGATC ATTTCTGAGTTCGAGGAGACCGACTACGAGGTCGACCTCGAGTCGAAATCTGCGACGTTCACGGAAGAAGGAATCGTCAA GATTGAAGAGCTGTTCGCCATCGATAACCTGTTCAGCGCCTCACACCAGGTGCTCTATCACTATCTCGTCCAGGCGCTCC GTGCGAACGTCTTGTTCGAACTTGACGTCGACTATATCGTCCGAGAAGACAAGATTGAACTCATCGACTTGTTCACGGGA CGCATCATGGAAGGACGAAGCCTGTCGGAAGGGTTGCATCAGGCGCTCGAGGCGAAAGAAGGCGTCACCATCACCGAAGA GAACAAGACGACGGCGGAGATTACGATTCAGCACTATTTCCGCATGTATCCGCTCGTCGGTGGGATGACGGGGACGGCCC AGACGTCGCGCCAAGAGTTCTTGAAGACGTACAACATGGACGTCGTCCAAGTGCCGACGAACCGCGAACGTCAACGTGTC GACCATCCGGACCGCATCTTCATGACGACCGAGCAAAAGTATGCGGCAGTCACTGAGAAAGTAGCGGAACTGCATACGAC GGGACGACCGATCTTGATCGGGACGACCTCGATCGCACAATCGGAAGCCATCAGCAAGCATTTGAAGAAGAAGCGGATTG AGCATGACGTGTTGAACGCGAAGACGGTCGCGCAGGAAGCGGATATCATCGCGGACGCCGGTCAATTCGGCAAAGTGACG ATTGCAACGAACATGGCCGGACGTGGAACGGACATCACGCTCGACGCAAAAGCGAAGGAAGCGGGCGGTCTCTTCGTCAT CGGAACGGAGCGGCATGAGTCAAAACGTGTCGACAACCAGCTCCGCGGTCGTTCGGGGCGTCAAGGCGACCCGGGTGCGA CCGAGTTCTTCGTCTCGCTCGAAGATGAGATTGTAAAACGTTATGCGGCGCAGAAACTAGAACGCGTGGAGAAAAAATTG AAGCCGAGCGCGACAGGTGAAGTCTCGTCGAAAGATGCAATCGAGATCATCGAATATGCGCAGACGACGATCGAAGGACT CGGCGTCTCGATTCGAGACTACTTGTTCAAACTCGATGACGTCTTGAACGAGCAACGAAATATCATCTATACGATTCGTA ACCAGGCCGTCAACGCCGATGCGGATGCCATCACGAAAAACGTCCTCGGCATGATGCGTCTCGCCCTCGAGAACAGCATC GATATGCATGTGTCGGATGAACTCGTGCCTGAAGAATGGCCGATTGATGAGTTGAAAGATGACTTACGCTACTTGACGAT GCAGGAGCCGACATGGGCAAAAGACATCGCCGATACGCGTGAACTGAAGGATGCTTTAAACGACTGGATGGAGGCGATCA TCGCTACGACGGCGTCGCGCCTCGAACAGGACGACATCGTCCTCTTCGCCAAAGAATCGCTTCTCCGCGCCGTCGACATG AAGTGGACGGATCATTTGACGACGATGAGCGGATTGAAAGAAGGGATCGGGCTTCGCAGCTACGGTCAGGAAGACCCGAG CCGTCAGTTCGGAAAAGAAGGACTGGAAATCTTCGAACAGACGTATATCAATATCGCACGGGATGTCACGACGGAACTAT GCCAGCTCGACCGTTATTTCGCTGAGATGGCAGAGGAGGAAGTATAA
Upstream 100 bases:
>100_bases TTAGGAAGTTTTCGTAAAAAAGTCTCCGAATTGGTTCGATTTTCGTTATAATAGACGAGTATGTAAGTGATGAATTGATA GAAAGATGGAGGCTATTAGT
Downstream 100 bases:
>100_bases TGTTAGGATTTCGTAAACGTAAACAGATTGAGACAGGAAATAAAGAGGAAGGGCGCCAATTGACGCTCGTCATCGACGAC GCGATGGGGATCCCGAAAGA
Product: preprotein translocase, SecA subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 788; Mature: 788
Protein sequence:
>788_residues MIQFVKQLTNDQSRRLKAYERRVARINELETTMKALSDDEMRTYTETLKARLLDGKKVDDIAEEGFALVREASVRVLGMR HYDVQLIGGFALLEGNISEMPTGEGKTLVAALPSYVKALEGKGVHVITVNDYLARRDAEQIGKIHDFLGLTVGLNVPDIE ADEKRSAYQADITYGVGTEFGFDYLRDNLVHKPEERVQRPFHFAIVDEVDSILIDEAKTPLIIAQKDRSHIRLKQLAQQI ISEFEETDYEVDLESKSATFTEEGIVKIEELFAIDNLFSASHQVLYHYLVQALRANVLFELDVDYIVREDKIELIDLFTG RIMEGRSLSEGLHQALEAKEGVTITEENKTTAEITIQHYFRMYPLVGGMTGTAQTSRQEFLKTYNMDVVQVPTNRERQRV DHPDRIFMTTEQKYAAVTEKVAELHTTGRPILIGTTSIAQSEAISKHLKKKRIEHDVLNAKTVAQEADIIADAGQFGKVT IATNMAGRGTDITLDAKAKEAGGLFVIGTERHESKRVDNQLRGRSGRQGDPGATEFFVSLEDEIVKRYAAQKLERVEKKL KPSATGEVSSKDAIEIIEYAQTTIEGLGVSIRDYLFKLDDVLNEQRNIIYTIRNQAVNADADAITKNVLGMMRLALENSI DMHVSDELVPEEWPIDELKDDLRYLTMQEPTWAKDIADTRELKDALNDWMEAIIATTASRLEQDDIVLFAKESLLRAVDM KWTDHLTTMSGLKEGIGLRSYGQEDPSRQFGKEGLEIFEQTYINIARDVTTELCQLDRYFAEMAEEEV
Sequences:
>Translated_788_residues MIQFVKQLTNDQSRRLKAYERRVARINELETTMKALSDDEMRTYTETLKARLLDGKKVDDIAEEGFALVREASVRVLGMR HYDVQLIGGFALLEGNISEMPTGEGKTLVAALPSYVKALEGKGVHVITVNDYLARRDAEQIGKIHDFLGLTVGLNVPDIE ADEKRSAYQADITYGVGTEFGFDYLRDNLVHKPEERVQRPFHFAIVDEVDSILIDEAKTPLIIAQKDRSHIRLKQLAQQI ISEFEETDYEVDLESKSATFTEEGIVKIEELFAIDNLFSASHQVLYHYLVQALRANVLFELDVDYIVREDKIELIDLFTG RIMEGRSLSEGLHQALEAKEGVTITEENKTTAEITIQHYFRMYPLVGGMTGTAQTSRQEFLKTYNMDVVQVPTNRERQRV DHPDRIFMTTEQKYAAVTEKVAELHTTGRPILIGTTSIAQSEAISKHLKKKRIEHDVLNAKTVAQEADIIADAGQFGKVT IATNMAGRGTDITLDAKAKEAGGLFVIGTERHESKRVDNQLRGRSGRQGDPGATEFFVSLEDEIVKRYAAQKLERVEKKL KPSATGEVSSKDAIEIIEYAQTTIEGLGVSIRDYLFKLDDVLNEQRNIIYTIRNQAVNADADAITKNVLGMMRLALENSI DMHVSDELVPEEWPIDELKDDLRYLTMQEPTWAKDIADTRELKDALNDWMEAIIATTASRLEQDDIVLFAKESLLRAVDM KWTDHLTTMSGLKEGIGLRSYGQEDPSRQFGKEGLEIFEQTYINIARDVTTELCQLDRYFAEMAEEEV >Mature_788_residues MIQFVKQLTNDQSRRLKAYERRVARINELETTMKALSDDEMRTYTETLKARLLDGKKVDDIAEEGFALVREASVRVLGMR HYDVQLIGGFALLEGNISEMPTGEGKTLVAALPSYVKALEGKGVHVITVNDYLARRDAEQIGKIHDFLGLTVGLNVPDIE ADEKRSAYQADITYGVGTEFGFDYLRDNLVHKPEERVQRPFHFAIVDEVDSILIDEAKTPLIIAQKDRSHIRLKQLAQQI ISEFEETDYEVDLESKSATFTEEGIVKIEELFAIDNLFSASHQVLYHYLVQALRANVLFELDVDYIVREDKIELIDLFTG RIMEGRSLSEGLHQALEAKEGVTITEENKTTAEITIQHYFRMYPLVGGMTGTAQTSRQEFLKTYNMDVVQVPTNRERQRV DHPDRIFMTTEQKYAAVTEKVAELHTTGRPILIGTTSIAQSEAISKHLKKKRIEHDVLNAKTVAQEADIIADAGQFGKVT IATNMAGRGTDITLDAKAKEAGGLFVIGTERHESKRVDNQLRGRSGRQGDPGATEFFVSLEDEIVKRYAAQKLERVEKKL KPSATGEVSSKDAIEIIEYAQTTIEGLGVSIRDYLFKLDDVLNEQRNIIYTIRNQAVNADADAITKNVLGMMRLALENSI DMHVSDELVPEEWPIDELKDDLRYLTMQEPTWAKDIADTRELKDALNDWMEAIIATTASRLEQDDIVLFAKESLLRAVDM KWTDHLTTMSGLKEGIGLRSYGQEDPSRQFGKEGLEIFEQTYINIARDVTTELCQLDRYFAEMAEEEV
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=841, Percent_Identity=41.6171224732461, Blast_Score=616, Evalue=1e-177,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000185 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 89136; Mature: 89136
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQFVKQLTNDQSRRLKAYERRVARINELETTMKALSDDEMRTYTETLKARLLDGKKVDD CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH IAEEGFALVREASVRVLGMRHYDVQLIGGFALLEGNISEMPTGEGKTLVAALPSYVKALE HHHHHHHHHHHCCEEEEEEEECEEEEEECEEEECCCHHCCCCCCCCCHHHHHHHHHHHHC GKGVHVITVNDYLARRDAEQIGKIHDFLGLTVGLNVPDIEADEKRSAYQADITYGVGTEF CCCEEEEEECHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCHHCCCEEEEEEECCCCCC GFDYLRDNLVHKPEERVQRPFHFAIVDEVDSILIDEAKTPLIIAQKDRSHIRLKQLAQQI CHHHHHHHHCCCCHHHHCCCEEEEEHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH ISEFEETDYEVDLESKSATFTEEGIVKIEELFAIDNLFSASHQVLYHYLVQALRANVLFE HHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE LDVDYIVREDKIELIDLFTGRIMEGRSLSEGLHQALEAKEGVTITEENKTTAEITIQHYF ECHHHHEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEHHHHH RMYPLVGGMTGTAQTSRQEFLKTYNMDVVQVPTNRERQRVDHPDRIFMTTEQKYAAVTEK HHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCEEEEECCHHHHHHHHH VAELHTTGRPILIGTTSIAQSEAISKHLKKKRIEHDVLNAKTVAQEADIIADAGQFGKVT HHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IATNMAGRGTDITLDAKAKEAGGLFVIGTERHESKRVDNQLRGRSGRQGDPGATEFFVSL EEECCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHEEEEH EDEIVKRYAAQKLERVEKKLKPSATGEVSSKDAIEIIEYAQTTIEGLGVSIRDYLFKLDD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLNEQRNIIYTIRNQAVNADADAITKNVLGMMRLALENSIDMHVSDELVPEEWPIDELKD HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH DLRYLTMQEPTWAKDIADTRELKDALNDWMEAIIATTASRLEQDDIVLFAKESLLRAVDM HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCC KWTDHLTTMSGLKEGIGLRSYGQEDPSRQFGKEGLEIFEQTYINIARDVTTELCQLDRYF CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEMAEEEV HHHHHCCC >Mature Secondary Structure MIQFVKQLTNDQSRRLKAYERRVARINELETTMKALSDDEMRTYTETLKARLLDGKKVDD CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH IAEEGFALVREASVRVLGMRHYDVQLIGGFALLEGNISEMPTGEGKTLVAALPSYVKALE HHHHHHHHHHHCCEEEEEEEECEEEEEECEEEECCCHHCCCCCCCCCHHHHHHHHHHHHC GKGVHVITVNDYLARRDAEQIGKIHDFLGLTVGLNVPDIEADEKRSAYQADITYGVGTEF CCCEEEEEECHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCHHCCCEEEEEEECCCCCC GFDYLRDNLVHKPEERVQRPFHFAIVDEVDSILIDEAKTPLIIAQKDRSHIRLKQLAQQI CHHHHHHHHCCCCHHHHCCCEEEEEHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH ISEFEETDYEVDLESKSATFTEEGIVKIEELFAIDNLFSASHQVLYHYLVQALRANVLFE HHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE LDVDYIVREDKIELIDLFTGRIMEGRSLSEGLHQALEAKEGVTITEENKTTAEITIQHYF ECHHHHEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEHHHHH RMYPLVGGMTGTAQTSRQEFLKTYNMDVVQVPTNRERQRVDHPDRIFMTTEQKYAAVTEK HHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCEEEEECCHHHHHHHHH VAELHTTGRPILIGTTSIAQSEAISKHLKKKRIEHDVLNAKTVAQEADIIADAGQFGKVT HHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IATNMAGRGTDITLDAKAKEAGGLFVIGTERHESKRVDNQLRGRSGRQGDPGATEFFVSL EEECCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHEEEEH EDEIVKRYAAQKLERVEKKLKPSATGEVSSKDAIEIIEYAQTTIEGLGVSIRDYLFKLDD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLNEQRNIIYTIRNQAVNADADAITKNVLGMMRLALENSIDMHVSDELVPEEWPIDELKD HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH DLRYLTMQEPTWAKDIADTRELKDALNDWMEAIIATTASRLEQDDIVLFAKESLLRAVDM HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCC KWTDHLTTMSGLKEGIGLRSYGQEDPSRQFGKEGLEIFEQTYINIARDVTTELCQLDRYF CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEMAEEEV HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA