Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yunF [H]

Identifier: 229916521

GI number: 229916521

Start: 745329

End: 746174

Strand: Reverse

Name: yunF [H]

Synonym: EAT1b_0791

Alternate gene names: 229916521

Gene position: 746174-745329 (Counterclockwise)

Preceding gene: 229916522

Following gene: 229916520

Centisome position: 24.87

GC content: 49.29

Gene sequence:

>846_bases
ATGATCTACGTAGGTGTGACCGGATGGGGAGACCACGATTTGCTGTATACGACCCCAGAAGAACGAAAACATAAATTGTC
AACATATGCGGGACATTTCCCGACTGTTGAAGTCGACTCGACCTTCTATGCGATTCAACCTGTGAAAAATTTCGAAAAAT
GGGATGGGGAAACACCAGATCATTTTCAATTCGTTGTAAAAGTTTCCAGGGAAATGAGCGGACATGATCGTGAGCCGAAA
ACGCCTCTGATTGAACTGTTTGAGCGTTATCGCGTCTCGGTCGACCCGTTAAAACGAGCGGGGAAATTACGGGCTGTACT
CGTTCAACTACCGCCGTGGTTCGATGTGTCAAAGCCACACCTGGATTACTTGCGAACGCTTCGTGCCGAGCTGTCAGATT
ACGAGATTGCCATCGAGTTCCGCAATCCGACCTGGTTCTCAGAAGCGTTCCGGGACCGGACTCTTCAATTTTTGACGGAG
CAACGGTTCATCAACACGATTTGCGATGAACCGCAAACGAAAGAGAGTAGCATCCCGTTCGTACCGGTCGTGACCCATCC
AGACGTTGCGGTCGTTCGTTTACACGGGCGGAATACATCAGGTTGGCTAAAGAAACCGGGAATGACGAGTCAAGAATGGC
GGCATGTTCGCTGTCTGTATCGCTATAGCGAAGAGGAGCTTCAAGAATTGGCGACCTCACTTCGTGAAATTGACCGTGAA
GCGAAAGATGTGTATGTATACTTTAACAACAACTCGGCCGGGGATGCGGCACCGAATGCGAAGCGACTCATTGAGATCCT
TGGCCTCGAGTATGAACTCGCACCGAGACAAATCAGTTTGTTTTAG

Upstream 100 bases:

>100_bases
TCATCATGGGACTCGTCCTGTTGCTCGTCACATACATGGGCACATGGAACTGGTCGAAGCGGAAAGCGGCCGCCATTTCA
GAATCATAAAGGAGGACGCT

Downstream 100 bases:

>100_bases
AAGGAAGGGATGGCCATGACGACACTGACTATTTTTCATTACAACGATCTTCATTCAAAGTTCGACCAATGGCCGAAACT
TGTTTCATTTCTAGAAGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIYVGVTGWGDHDLLYTTPEERKHKLSTYAGHFPTVEVDSTFYAIQPVKNFEKWDGETPDHFQFVVKVSREMSGHDREPK
TPLIELFERYRVSVDPLKRAGKLRAVLVQLPPWFDVSKPHLDYLRTLRAELSDYEIAIEFRNPTWFSEAFRDRTLQFLTE
QRFINTICDEPQTKESSIPFVPVVTHPDVAVVRLHGRNTSGWLKKPGMTSQEWRHVRCLYRYSEEELQELATSLREIDRE
AKDVYVYFNNNSAGDAAPNAKRLIEILGLEYELAPRQISLF

Sequences:

>Translated_281_residues
MIYVGVTGWGDHDLLYTTPEERKHKLSTYAGHFPTVEVDSTFYAIQPVKNFEKWDGETPDHFQFVVKVSREMSGHDREPK
TPLIELFERYRVSVDPLKRAGKLRAVLVQLPPWFDVSKPHLDYLRTLRAELSDYEIAIEFRNPTWFSEAFRDRTLQFLTE
QRFINTICDEPQTKESSIPFVPVVTHPDVAVVRLHGRNTSGWLKKPGMTSQEWRHVRCLYRYSEEELQELATSLREIDRE
AKDVYVYFNNNSAGDAAPNAKRLIEILGLEYELAPRQISLF
>Mature_281_residues
MIYVGVTGWGDHDLLYTTPEERKHKLSTYAGHFPTVEVDSTFYAIQPVKNFEKWDGETPDHFQFVVKVSREMSGHDREPK
TPLIELFERYRVSVDPLKRAGKLRAVLVQLPPWFDVSKPHLDYLRTLRAELSDYEIAIEFRNPTWFSEAFRDRTLQFLTE
QRFINTICDEPQTKESSIPFVPVVTHPDVAVVRLHGRNTSGWLKKPGMTSQEWRHVRCLYRYSEEELQELATSLREIDRE
AKDVYVYFNNNSAGDAAPNAKRLIEILGLEYELAPRQISLF

Specific function: Unknown

COG id: COG1801

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0759 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002763 [H]

Pfam domain/function: PF01904 DUF72 [H]

EC number: NA

Molecular weight: Translated: 32823; Mature: 32823

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYVGVTGWGDHDLLYTTPEERKHKLSTYAGHFPTVEVDSTFYAIQPVKNFEKWDGETPD
CEEEEECCCCCCCCEEECCHHHHHHHHHHCCCCCEEEECCEEEEECCHHHHHHCCCCCCH
HFQFVVKVSREMSGHDREPKTPLIELFERYRVSVDPLKRAGKLRAVLVQLPPWFDVSKPH
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCEEEEEEECCCCCCCCCCH
LDYLRTLRAELSDYEIAIEFRNPTWFSEAFRDRTLQFLTEQRFINTICDEPQTKESSIPF
HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
VPVVTHPDVAVVRLHGRNTSGWLKKPGMTSQEWRHVRCLYRYSEEELQELATSLREIDRE
EEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
AKDVYVYFNNNSAGDAAPNAKRLIEILGLEYELAPRQISLF
CCEEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCCEEECC
>Mature Secondary Structure
MIYVGVTGWGDHDLLYTTPEERKHKLSTYAGHFPTVEVDSTFYAIQPVKNFEKWDGETPD
CEEEEECCCCCCCCEEECCHHHHHHHHHHCCCCCEEEECCEEEEECCHHHHHHCCCCCCH
HFQFVVKVSREMSGHDREPKTPLIELFERYRVSVDPLKRAGKLRAVLVQLPPWFDVSKPH
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCEEEEEEECCCCCCCCCCH
LDYLRTLRAELSDYEIAIEFRNPTWFSEAFRDRTLQFLTEQRFINTICDEPQTKESSIPF
HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
VPVVTHPDVAVVRLHGRNTSGWLKKPGMTSQEWRHVRCLYRYSEEELQELATSLREIDRE
EEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
AKDVYVYFNNNSAGDAAPNAKRLIEILGLEYELAPRQISLF
CCEEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]