| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is blt [H]
Identifier: 229916522
GI number: 229916522
Start: 746186
End: 747367
Strand: Reverse
Name: blt [H]
Synonym: EAT1b_0792
Alternate gene names: 229916522
Gene position: 747367-746186 (Counterclockwise)
Preceding gene: 229916523
Following gene: 229916521
Centisome position: 24.91
GC content: 49.15
Gene sequence:
>1182_bases TTGACGACAAAACAAAAAAATCAATTGGCGATTCTCATGTTGAACATGTTTATCGCCGTCGCCGGGTTTGGGATCATCAT CCCGATTATTCCGGATTACTTAAAGATGATTGGCGAGGGAGGGACAGCCGCCGGACTCATGATTTCCGTATTTGCGGGTG CCCAACTCGTCATGTCACCGATTGCCGGGAAATGGGCGGACGTCTACGGCCGCCGACTCATGATCATTCTCGGTCTAATC GGATTCACCATCTCGATGGGAGTCTTCTATCTATCAGATAATTTAACGATTCTTCTCGTCTCTCGTGCCATCGGGGGTGT TGGTGCAGCGCTTTTGATTCCTGCCATCTTCGCTTATGTGGCAGATATCACGACACTCGAGCAACGAGCTCGAGGAAACA GTTATATTTCCGCGGCAATGTCGCTTGGAATTGTGGTCGGACCAGGGATTGGGGGCTTTTTTGCTGAATTTGGCTTGAAG ACACCGTTGCTCGTTTCAGCGATTGTATCGTTTATCGCTGTCATTTCGTCTGTACTCCTTCTTAAGGAGCCGGACCGTGC TCCGTACGTGGCACCAAAAATAAAAGAATCTTTACCGACACAGCTGGTCATGTCGACGCGAAAACCATACTTCTTCGTAT TGGTCATCAACCTCGTGATGGCGTTTGGTCTGATGGCGTATGAATCGGTACTCGGACTCTATGTCAGCGAGATGTTCAGT GCGACACCACAAGAAATTGCCATCATGGTAACCGGAACAGGGATTGTAAGTGTCATCGTTCAATTGTTTGCGGTGGACCG TCTCGTCGAATGGTTGGGTGAGACCAAGGTCGTGCTCGCTTTCATCGCACTCGCCTCATTTGGCTTCTTGTTATCTTTGT TCGCGGGCACGTATATGCTCTTCTTCGCAGTGACACTTGTGATTTTCTTATCGACATCCATTTTACGACCGGTGTTGAAC ACACTCGTGTCGAAACTGGCTGGCAATGAGCAAGGTCTCGCCATGGGGATGAACAACGCCTATATGAGTATCGGGAACAT TTTAGGACCAACATTGGCGGGAATCGCCTTTGATATCGATATGCGCTATCCGTTCATCATGGGACTCGTCCTGTTGCTCG TCACATACATGGGCACATGGAACTGGTCGAAGCGGAAAGCGGCCGCCATTTCAGAATCATAA
Upstream 100 bases:
>100_bases CGCCCATCCTTTGGTCAAGGATGGGTTTTTTCTGTCTTATTGTTTGCCTGGATGTGAACTCAAACAGTAAAATGGAAAGA TGAAAAGGGAGTGACATGCG
Downstream 100 bases:
>100_bases AGGAGGACGCTATGATCTACGTAGGTGTGACCGGATGGGGAGACCACGATTTGCTGTATACGACCCCAGAAGAACGAAAA CATAAATTGTCAACATATGC
Product: major facilitator superfamily MFS_1
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: Multidrug-efflux transporter 2 [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTTKQKNQLAILMLNMFIAVAGFGIIIPIIPDYLKMIGEGGTAAGLMISVFAGAQLVMSPIAGKWADVYGRRLMIILGLI GFTISMGVFYLSDNLTILLVSRAIGGVGAALLIPAIFAYVADITTLEQRARGNSYISAAMSLGIVVGPGIGGFFAEFGLK TPLLVSAIVSFIAVISSVLLLKEPDRAPYVAPKIKESLPTQLVMSTRKPYFFVLVINLVMAFGLMAYESVLGLYVSEMFS ATPQEIAIMVTGTGIVSVIVQLFAVDRLVEWLGETKVVLAFIALASFGFLLSLFAGTYMLFFAVTLVIFLSTSILRPVLN TLVSKLAGNEQGLAMGMNNAYMSIGNILGPTLAGIAFDIDMRYPFIMGLVLLLVTYMGTWNWSKRKAAAISES
Sequences:
>Translated_393_residues MTTKQKNQLAILMLNMFIAVAGFGIIIPIIPDYLKMIGEGGTAAGLMISVFAGAQLVMSPIAGKWADVYGRRLMIILGLI GFTISMGVFYLSDNLTILLVSRAIGGVGAALLIPAIFAYVADITTLEQRARGNSYISAAMSLGIVVGPGIGGFFAEFGLK TPLLVSAIVSFIAVISSVLLLKEPDRAPYVAPKIKESLPTQLVMSTRKPYFFVLVINLVMAFGLMAYESVLGLYVSEMFS ATPQEIAIMVTGTGIVSVIVQLFAVDRLVEWLGETKVVLAFIALASFGFLLSLFAGTYMLFFAVTLVIFLSTSILRPVLN TLVSKLAGNEQGLAMGMNNAYMSIGNILGPTLAGIAFDIDMRYPFIMGLVLLLVTYMGTWNWSKRKAAAISES >Mature_392_residues TTKQKNQLAILMLNMFIAVAGFGIIIPIIPDYLKMIGEGGTAAGLMISVFAGAQLVMSPIAGKWADVYGRRLMIILGLIG FTISMGVFYLSDNLTILLVSRAIGGVGAALLIPAIFAYVADITTLEQRARGNSYISAAMSLGIVVGPGIGGFFAEFGLKT PLLVSAIVSFIAVISSVLLLKEPDRAPYVAPKIKESLPTQLVMSTRKPYFFVLVINLVMAFGLMAYESVLGLYVSEMFSA TPQEIAIMVTGTGIVSVIVQLFAVDRLVEWLGETKVVLAFIALASFGFLLSLFAGTYMLFFAVTLVIFLSTSILRPVLNT LVSKLAGNEQGLAMGMNNAYMSIGNILGPTLAGIAFDIDMRYPFIMGLVLLLVTYMGTWNWSKRKAAAISES
Specific function: Energy-dependent efflux pump responsible for decreased drug accumulation in multi-drug-resistant cells. Probably uses a transmembrane proton gradient as the energy source. Causes the efflux of a variety of toxic substances, including such structurally div
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Homo sapiens, GI217416366, Length=410, Percent_Identity=21.4634146341463, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1787291, Length=396, Percent_Identity=22.7272727272727, Blast_Score=63, Evalue=4e-11, Organism=Drosophila melanogaster, GI17738085, Length=359, Percent_Identity=27.0194986072423, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI17137160, Length=388, Percent_Identity=25.2577319587629, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 - InterPro: IPR005829 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42143; Mature: 42012
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKQKNQLAILMLNMFIAVAGFGIIIPIIPDYLKMIGEGGTAAGLMISVFAGAQLVMSP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IAGKWADVYGRRLMIILGLIGFTISMGVFYLSDNLTILLVSRAIGGVGAALLIPAIFAYV HCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHCCCHHHHHHHHHHHHH ADITTLEQRARGNSYISAAMSLGIVVGPGIGGFFAEFGLKTPLLVSAIVSFIAVISSVLL HHHHHHHHHHCCCHHHHHHHHHCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LKEPDRAPYVAPKIKESLPTQLVMSTRKPYFFVLVINLVMAFGLMAYESVLGLYVSEMFS HCCCCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ATPQEIAIMVTGTGIVSVIVQLFAVDRLVEWLGETKVVLAFIALASFGFLLSLFAGTYML CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH FFAVTLVIFLSTSILRPVLNTLVSKLAGNEQGLAMGMNNAYMSIGNILGPTLAGIAFDID HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEEC MRYPFIMGLVLLLVTYMGTWNWSKRKAAAISES CCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC >Mature Secondary Structure TTKQKNQLAILMLNMFIAVAGFGIIIPIIPDYLKMIGEGGTAAGLMISVFAGAQLVMSP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IAGKWADVYGRRLMIILGLIGFTISMGVFYLSDNLTILLVSRAIGGVGAALLIPAIFAYV HCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHCCCHHHHHHHHHHHHH ADITTLEQRARGNSYISAAMSLGIVVGPGIGGFFAEFGLKTPLLVSAIVSFIAVISSVLL HHHHHHHHHHCCCHHHHHHHHHCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LKEPDRAPYVAPKIKESLPTQLVMSTRKPYFFVLVINLVMAFGLMAYESVLGLYVSEMFS HCCCCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ATPQEIAIMVTGTGIVSVIVQLFAVDRLVEWLGETKVVLAFIALASFGFLLSLFAGTYML CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH FFAVTLVIFLSTSILRPVLNTLVSKLAGNEQGLAMGMNNAYMSIGNILGPTLAGIAFDID HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEEC MRYPFIMGLVLLLVTYMGTWNWSKRKAAAISES CCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7608059; 8969508; 9384377 [H]