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The map label for this gene is padR [H]

Identifier: 229916190

GI number: 229916190

Start: 419658

End: 420206

Strand: Reverse

Name: padR [H]

Synonym: EAT1b_0459

Alternate gene names: 229916190

Gene position: 420206-419658 (Counterclockwise)

Preceding gene: 229916193

Following gene: 229916188

Centisome position: 14.01

GC content: 47.18

Gene sequence:

>549_bases
ATGGATATGGCGTTACGTCACGCATTGCTCGGGTTATTGACCCATCAGCCTGCGACCGGGTATGCCTTGAACGCTACGTT
CAAGGCACAGATGATTCATTTTTGGAACGCCCATCATACACAGATTTATCGGGAACTGTTAAAGATGGAAGAAGAAGCAC
TCGTTTCGGTGGAACATGTCTCACAACAAGAGTTGCCAGACAAAAAAATCTACTCCATCACGGACCAAGGACGTGAGGAG
TTAATCAATTGGTTACGTCAACCAACGTCGTTCCAACCGAAAATGAAGGATGAAAACCTCCTGCGGGTCAGTTTGCTTCA
ATTGTTGCCGGTTGAAGAAGCGGTCCGGTATATCGAAGAAACAAAGGCGCACCATGAGCAGGTCGCACAACAGATTCGAT
TATTTCAAGAAGAACATCAATCGGACGAAGATACACTCGGTTATTTACTGACTAGCGAATATGCGATCCGGATGATGGAG
AACTATGCCGGATGGGCGGACTGGGCGATCGAACAGATTCAAGCACGCAACGAAAAACACGTGACCTGA

Upstream 100 bases:

>100_bases
TATTTTGTCGGGTTTTTAACGGGTCGTCAACAGATTGGCATTCTCGAAACCGTTTGAGAATGTGATACACTAATAAAAAT
AGCATGAGAAGGAAAAGGTG

Downstream 100 bases:

>100_bases
GCGGATCAGGTCACGTGTTTTGTGTATGGATGGACCGGTAAACGAGCGAGTAGGCGATCAAGCACTTCATCATCGATTTC
AGTTTCGAACGCGCGAATCG

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MDMALRHALLGLLTHQPATGYALNATFKAQMIHFWNAHHTQIYRELLKMEEEALVSVEHVSQQELPDKKIYSITDQGREE
LINWLRQPTSFQPKMKDENLLRVSLLQLLPVEEAVRYIEETKAHHEQVAQQIRLFQEEHQSDEDTLGYLLTSEYAIRMME
NYAGWADWAIEQIQARNEKHVT

Sequences:

>Translated_182_residues
MDMALRHALLGLLTHQPATGYALNATFKAQMIHFWNAHHTQIYRELLKMEEEALVSVEHVSQQELPDKKIYSITDQGREE
LINWLRQPTSFQPKMKDENLLRVSLLQLLPVEEAVRYIEETKAHHEQVAQQIRLFQEEHQSDEDTLGYLLTSEYAIRMME
NYAGWADWAIEQIQARNEKHVT
>Mature_182_residues
MDMALRHALLGLLTHQPATGYALNATFKAQMIHFWNAHHTQIYRELLKMEEEALVSVEHVSQQELPDKKIYSITDQGREE
LINWLRQPTSFQPKMKDENLLRVSLLQLLPVEEAVRYIEETKAHHEQVAQQIRLFQEEHQSDEDTLGYLLTSEYAIRMME
NYAGWADWAIEQIQARNEKHVT

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21410; Mature: 21410

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMALRHALLGLLTHQPATGYALNATFKAQMIHFWNAHHTQIYRELLKMEEEALVSVEHV
CCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
SQQELPDKKIYSITDQGREELINWLRQPTSFQPKMKDENLLRVSLLQLLPVEEAVRYIEE
HHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
TKAHHEQVAQQIRLFQEEHQSDEDTLGYLLTSEYAIRMMENYAGWADWAIEQIQARNEKH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
VT
CC
>Mature Secondary Structure
MDMALRHALLGLLTHQPATGYALNATFKAQMIHFWNAHHTQIYRELLKMEEEALVSVEHV
CCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
SQQELPDKKIYSITDQGREELINWLRQPTSFQPKMKDENLLRVSLLQLLPVEEAVRYIEE
HHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
TKAHHEQVAQQIRLFQEEHQSDEDTLGYLLTSEYAIRMMENYAGWADWAIEQIQARNEKH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
VT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]