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The map label for this gene is ygbD [C]

Identifier: 229916193

GI number: 229916193

Start: 421117

End: 422043

Strand: Reverse

Name: ygbD [C]

Synonym: EAT1b_0462

Alternate gene names: 229916193

Gene position: 422043-421117 (Counterclockwise)

Preceding gene: 229916194

Following gene: 229916190

Centisome position: 14.07

GC content: 49.95

Gene sequence:

>927_bases
ATGAAGCCGAAGTTGGTGTTGGCCGGACTTGGGCACGGACAGCTCGAAATTCTCGATCGTATTGAAGAGATTTGCGAACA
GTATGATGTTCGCTTCATTGGAGACTGTCAGACGATTTATACTGGCGCGTTTCCACAAGTGATTGCCGGGCTCATGGATT
CAGCTTCGGTCCGATCACCTCAACTAGAACCGGTCGCAAAGCGGGTGCTCTCGATTGACCCGATTCAGCAGACGGTTCAG
ACGGAGAACGGAATGTTTGAATACGATCAACTCGTTCTAGCGACCGGTGCGAAAAGTAGGGGAATCGGCACGCCACTTAA
ACCGATGTCACAAGCTTTACTCGACCGAATCGAATCGAGTTCAAGAGTGACCATCGTCGGGGGTGGGAAGGCGGGCGTAG
AATTGGCGTTCACGTGCGCTCGTACAAAGAATGTGACGCTGTATGCGAAAGAGATATTACCAGACGTCCCGGTCCATACT
AGAAAGCACATCGAGCGGTTGTTAGTCAAAACAGGGGTCATGGTCGTCAAACAGGCGTTTCATGCAGACGCATCGGAAGG
GCTCTTATTGGATGCGACGGGGGTCGTTCCCATGGAATGGTGGGCCGAATCAGGGCTTGCAAAACCTGAGAGATTTATAG
AGACAGACGAATATTTGCGTCATCGTCAATTCACAAATATATATGTAACAGGCGATATGGCATCCTGCTTAAACGGTGGC
GTCGATGCGGTTAGATCAGGGCGCTATGTCGGCAAACGGTTACTTAAGGAAACAAGCCGACTATTTCGGAGACGTCAATC
GATGAATATCTTACTGACGACACCAGGTCACGCCTTGCTGACATATGGACGGTTTACATGGCATGGTCGGATTCCATATT
ATATGAAGCGCTCGATTGACTCGCGGTATGTTCGGCATTACAAGTAG

Upstream 100 bases:

>100_bases
TTCTCTTTCCGAACTGGGTTGGCGGGATTGCGCTTATCTTTTTATTGCTTGAAGTCATGACGATCACACAACGATTCATT
GAAGCGCGGAGAATTTTGCG

Downstream 100 bases:

>100_bases
TTGGGGGTTCGAACCGTTATTCGCTTAAAAGATGGCCAATCACTTCGTTCGATTTCGGTTCAACGAGTACTTGTGGAATC
TCGACCGTGCGCTGTGAATC

Product: FAD-dependent pyridine nucleotide-disulphide oxidoreductase

Products: NAD; reduced flavorubredoxin; H2O [C]

Alternate protein names: Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKPKLVLAGLGHGQLEILDRIEEICEQYDVRFIGDCQTIYTGAFPQVIAGLMDSASVRSPQLEPVAKRVLSIDPIQQTVQ
TENGMFEYDQLVLATGAKSRGIGTPLKPMSQALLDRIESSSRVTIVGGGKAGVELAFTCARTKNVTLYAKEILPDVPVHT
RKHIERLLVKTGVMVVKQAFHADASEGLLLDATGVVPMEWWAESGLAKPERFIETDEYLRHRQFTNIYVTGDMASCLNGG
VDAVRSGRYVGKRLLKETSRLFRRRQSMNILLTTPGHALLTYGRFTWHGRIPYYMKRSIDSRYVRHYK

Sequences:

>Translated_308_residues
MKPKLVLAGLGHGQLEILDRIEEICEQYDVRFIGDCQTIYTGAFPQVIAGLMDSASVRSPQLEPVAKRVLSIDPIQQTVQ
TENGMFEYDQLVLATGAKSRGIGTPLKPMSQALLDRIESSSRVTIVGGGKAGVELAFTCARTKNVTLYAKEILPDVPVHT
RKHIERLLVKTGVMVVKQAFHADASEGLLLDATGVVPMEWWAESGLAKPERFIETDEYLRHRQFTNIYVTGDMASCLNGG
VDAVRSGRYVGKRLLKETSRLFRRRQSMNILLTTPGHALLTYGRFTWHGRIPYYMKRSIDSRYVRHYK
>Mature_308_residues
MKPKLVLAGLGHGQLEILDRIEEICEQYDVRFIGDCQTIYTGAFPQVIAGLMDSASVRSPQLEPVAKRVLSIDPIQQTVQ
TENGMFEYDQLVLATGAKSRGIGTPLKPMSQALLDRIESSSRVTIVGGGKAGVELAFTCARTKNVTLYAKEILPDVPVHT
RKHIERLLVKTGVMVVKQAFHADASEGLLLDATGVVPMEWWAESGLAKPERFIETDEYLRHRQFTNIYVTGDMASCLNGG
VDAVRSGRYVGKRLLKETSRLFRRRQSMNILLTTPGHALLTYGRFTWHGRIPYYMKRSIDSRYVRHYK

Specific function: Unknown

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34543; Mature: 34543

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKLVLAGLGHGQLEILDRIEEICEQYDVRFIGDCQTIYTGAFPQVIAGLMDSASVRSP
CCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCHHHHCCCHHHHHHHHHCCCCCCCC
QLEPVAKRVLSIDPIQQTVQTENGMFEYDQLVLATGAKSRGIGTPLKPMSQALLDRIESS
CCCHHHHHHHCCCHHHHHHHHCCCCCHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
SRVTIVGGGKAGVELAFTCARTKNVTLYAKEILPDVPVHTRKHIERLLVKTGVMVVKQAF
CEEEEEECCCCCEEEEEEEECCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
HADASEGLLLDATGVVPMEWWAESGLAKPERFIETDEYLRHRQFTNIYVTGDMASCLNGG
CCCCCCCEEEECCCCCCHHHHHHCCCCCHHHHHCHHHHHHHHHCCEEEEECCHHHHHCCC
VDAVRSGRYVGKRLLKETSRLFRRRQSMNILLTTPGHALLTYGRFTWHGRIPYYMKRSID
HHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECEEEEECCCHHHHHHHHH
SRYVRHYK
HHHHHCCC
>Mature Secondary Structure
MKPKLVLAGLGHGQLEILDRIEEICEQYDVRFIGDCQTIYTGAFPQVIAGLMDSASVRSP
CCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCHHHHCCCHHHHHHHHHCCCCCCCC
QLEPVAKRVLSIDPIQQTVQTENGMFEYDQLVLATGAKSRGIGTPLKPMSQALLDRIESS
CCCHHHHHHHCCCHHHHHHHHCCCCCHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
SRVTIVGGGKAGVELAFTCARTKNVTLYAKEILPDVPVHTRKHIERLLVKTGVMVVKQAF
CEEEEEECCCCCEEEEEEEECCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
HADASEGLLLDATGVVPMEWWAESGLAKPERFIETDEYLRHRQFTNIYVTGDMASCLNGG
CCCCCCCEEEECCCCCCHHHHHHCCCCCHHHHHCHHHHHHHHHCCEEEEECCHHHHHCCC
VDAVRSGRYVGKRLLKETSRLFRRRQSMNILLTTPGHALLTYGRFTWHGRIPYYMKRSID
HHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECEEEEECCCHHHHHHHHH
SRYVRHYK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; oxidized flavorubredoxin; O2 [C]

Specific reaction: NADH + oxidized flavorubredoxin + O2 = NAD + reduced flavorubredoxin + H2O [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA