| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yjbB [H]
Identifier: 229916150
GI number: 229916150
Start: 383037
End: 384194
Strand: Direct
Name: yjbB [H]
Synonym: EAT1b_0419
Alternate gene names: 229916150
Gene position: 383037-384194 (Clockwise)
Preceding gene: 229916146
Following gene: 229916153
Centisome position: 12.77
GC content: 50.09
Gene sequence:
>1158_bases ATGAAATCGTTTTACACATTGCTCGTTAGCCAATGGCTCGCAAACACTGGCGATGTCCTATACATCGTCGCGCTCATTGC CTTGCTGTATCAACAAACTAGGTCCGCTCTCATGGCGGCCAGCTTCCCGATTGCCGTGACTGCCGGTATGACGCTCAGCG GATTCTTTTTCGCCCGCATCCTCAGTCGCTACTCGCTCGGGAAAACGCTCGTCCTGTCACAACTGATGAAGACGGTCACC CTTGTTCTCGTTCTCTTCACGGATTCGATTCTTGTTCTCGGACTCGTCCTGTTCATTGCATTCCTCGATGGATTCGCACG TCCAATTCAAGCGTCGTTCATCCCGAGATTGACGACGAATCGCCAACAAGCGAACAGCCTCGTTCAAGGTTCCAATCAGT TCATCCAACTCGCGATGTGGCCGCTCGGGACGATGCTCGTCTCTCTCACGTCGAGCGCCATTGCGCTAATCGTGTCACTC GTTCTCTTCAGCCTTTCGACGATTGTGACGATTTACTTCTATCAATCGCTTACGGAAGACATCGTTGATGACGAAACGGA TGAATCGATTACCTTACGCGATAGTCTTACTTATGTAAGAACGTCACCATTCGCTCGTCGAGTGACTGGGTTTGTGACGT ATGAATCATTTGTCAGCACGCTTTGGATTTCAGCGTTGCTTCTCGTCTATCTCGAGCGACATCTGCAAGTCGATCCAGGC TGGTGGGGAACGCTGAACGCATCATTTTTGATCAGTATGATTGCAGCGAGTGCTTATCTTTATCGGTCTCGTCGAGCGCC CTCGCTACCGTCGACTGCCGTCTTATCCATTGTTTCCGCTCTGTTGTTCGGCGTGACCGAGCATCTTGCGTTTGCGATTT TGGCGTTAGTCATTCAAGGCGCAGCTACACAAATCCGCATCATCCAGACGAACACCGTCATTCAAGAACAGATCCCGACT ACACAACTTCCTTATGTATATAGTGTGCAACAAACGGGATACGCCCTCGCATTCAGTATGGGGAGTTTGCTGTTCGGTCT TCTTGCGGATGGACTACCGATCGATTCGGTATACCTTCTCGGTGCATTCTTGACCATTCCGTTAATCTGGATTGGGCGAT TGACCGAACAGTCCATTTTAACCGCATCTTCTGTATAA
Upstream 100 bases:
>100_bases TTTTGTATAATTATTTTTATATCATTTTATGAAGAGGTGAAAATGTGTAATAACGATACGTCCAACCCACCCAATTGAAT AGATTCGGAGGAGATTTGTG
Downstream 100 bases:
>100_bases ACAAGAGGCGCCTTCTCTAAGAGAGGGCGCCTTTACGTGTAGAACTTTCCACTGAAATATACGGTTGGACTCCCCTTTCG ATTACAATCGAGTGAAATCA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MKSFYTLLVSQWLANTGDVLYIVALIALLYQQTRSALMAASFPIAVTAGMTLSGFFFARILSRYSLGKTLVLSQLMKTVT LVLVLFTDSILVLGLVLFIAFLDGFARPIQASFIPRLTTNRQQANSLVQGSNQFIQLAMWPLGTMLVSLTSSAIALIVSL VLFSLSTIVTIYFYQSLTEDIVDDETDESITLRDSLTYVRTSPFARRVTGFVTYESFVSTLWISALLLVYLERHLQVDPG WWGTLNASFLISMIAASAYLYRSRRAPSLPSTAVLSIVSALLFGVTEHLAFAILALVIQGAATQIRIIQTNTVIQEQIPT TQLPYVYSVQQTGYALAFSMGSLLFGLLADGLPIDSVYLLGAFLTIPLIWIGRLTEQSILTASSV
Sequences:
>Translated_385_residues MKSFYTLLVSQWLANTGDVLYIVALIALLYQQTRSALMAASFPIAVTAGMTLSGFFFARILSRYSLGKTLVLSQLMKTVT LVLVLFTDSILVLGLVLFIAFLDGFARPIQASFIPRLTTNRQQANSLVQGSNQFIQLAMWPLGTMLVSLTSSAIALIVSL VLFSLSTIVTIYFYQSLTEDIVDDETDESITLRDSLTYVRTSPFARRVTGFVTYESFVSTLWISALLLVYLERHLQVDPG WWGTLNASFLISMIAASAYLYRSRRAPSLPSTAVLSIVSALLFGVTEHLAFAILALVIQGAATQIRIIQTNTVIQEQIPT TQLPYVYSVQQTGYALAFSMGSLLFGLLADGLPIDSVYLLGAFLTIPLIWIGRLTEQSILTASSV >Mature_385_residues MKSFYTLLVSQWLANTGDVLYIVALIALLYQQTRSALMAASFPIAVTAGMTLSGFFFARILSRYSLGKTLVLSQLMKTVT LVLVLFTDSILVLGLVLFIAFLDGFARPIQASFIPRLTTNRQQANSLVQGSNQFIQLAMWPLGTMLVSLTSSAIALIVSL VLFSLSTIVTIYFYQSLTEDIVDDETDESITLRDSLTYVRTSPFARRVTGFVTYESFVSTLWISALLLVYLERHLQVDPG WWGTLNASFLISMIAASAYLYRSRRAPSLPSTAVLSIVSALLFGVTEHLAFAILALVIQGAATQIRIIQTNTVIQEQIPT TQLPYVYSVQQTGYALAFSMGSLLFGLLADGLPIDSVYLLGAFLTIPLIWIGRLTEQSILTASSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42285; Mature: 42285
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFYTLLVSQWLANTGDVLYIVALIALLYQQTRSALMAASFPIAVTAGMTLSGFFFARI CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHH LSRYSLGKTLVLSQLMKTVTLVLVLFTDSILVLGLVLFIAFLDGFARPIQASFIPRLTTN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC RQQANSLVQGSNQFIQLAMWPLGTMLVSLTSSAIALIVSLVLFSLSTIVTIYFYQSLTED HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVDDETDESITLRDSLTYVRTSPFARRVTGFVTYESFVSTLWISALLLVYLERHLQVDPG HCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WWGTLNASFLISMIAASAYLYRSRRAPSLPSTAVLSIVSALLFGVTEHLAFAILALVIQG CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AATQIRIIQTNTVIQEQIPTTQLPYVYSVQQTGYALAFSMGSLLFGLLADGLPIDSVYLL CCCEEEEEECCHHHHHCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHH GAFLTIPLIWIGRLTEQSILTASSV HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSFYTLLVSQWLANTGDVLYIVALIALLYQQTRSALMAASFPIAVTAGMTLSGFFFARI CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHH LSRYSLGKTLVLSQLMKTVTLVLVLFTDSILVLGLVLFIAFLDGFARPIQASFIPRLTTN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC RQQANSLVQGSNQFIQLAMWPLGTMLVSLTSSAIALIVSLVLFSLSTIVTIYFYQSLTED HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVDDETDESITLRDSLTYVRTSPFARRVTGFVTYESFVSTLWISALLLVYLERHLQVDPG HCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WWGTLNASFLISMIAASAYLYRSRRAPSLPSTAVLSIVSALLFGVTEHLAFAILALVIQG CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AATQIRIIQTNTVIQEQIPTTQLPYVYSVQQTGYALAFSMGSLLFGLLADGLPIDSVYLL CCCEEEEEECCHHHHHCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHH GAFLTIPLIWIGRLTEQSILTASSV HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]