| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916153
Identifier: 229916153
GI number: 229916153
Start: 385637
End: 386185
Strand: Direct
Name: 229916153
Synonym: EAT1b_0422
Alternate gene names: NA
Gene position: 385637-386185 (Clockwise)
Preceding gene: 229916150
Following gene: 229916177
Centisome position: 12.86
GC content: 48.27
Gene sequence:
>549_bases ATGTCGAAGCTTTCACACGAAGAAACCCTCGAATTACTTCATACCCTCGAGTCTCGTTTCACTGAAAACGTTGAACGTCA TTCTAACGTCGTCTGGTCAGACGTATTGGAGCGTATTCAAATTGATCAGGATAAGTTGACCTCACTCGCCTTGATGGAAG AGACCGGCGGAGAACCAGACGTGATTCGTCTCCCTAACGGAGACCTCGCTTTTTGCGACTGTTCAACCGAGAGTCCGAGC GGTCGACGAAGTCTCTGTTATGACGAATCAGCTCTTGAGGCACGTAAAAAGAATAAGCCTGCCGGAAGCGCGCTCGCCTT ATCTGAACAGATGGGAATCAGCCTTCTCGATGAAGAAACCTACCGTCACTTACAAACGCTCGGGGCATTCGACTTGAAAA CGTCGAGTTGGATTCAGACACCGGATGTGATACGTCAAAAAGGTGGCGCCCTGTTTTGCGACCGTCGTTATGATCACATC TTCGTCTACCATAACGGTGCAGATTCTTATTATGCCGCTCGAGGATTTAGAGGAATGATCACGATTTAA
Upstream 100 bases:
>100_bases ATCAAAGTTCAAACCAGATTCTCCTTTCTTGTAACGAATGAAGTAAATTGAACTAAATAATGTCGTATACTGAAAGAAAT ACATGATCGGAGTGATTCCC
Downstream 100 bases:
>100_bases GCAAGGCATTGCGCCTTGCTTTTTTTATTGCAAAAACCAACTCAAGACTTTTGGAATGTAGATGATGAAAAATAAACCGA CAGGAATCAATGCAAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSKLSHEETLELLHTLESRFTENVERHSNVVWSDVLERIQIDQDKLTSLALMEETGGEPDVIRLPNGDLAFCDCSTESPS GRRSLCYDESALEARKKNKPAGSALALSEQMGISLLDEETYRHLQTLGAFDLKTSSWIQTPDVIRQKGGALFCDRRYDHI FVYHNGADSYYAARGFRGMITI
Sequences:
>Translated_182_residues MSKLSHEETLELLHTLESRFTENVERHSNVVWSDVLERIQIDQDKLTSLALMEETGGEPDVIRLPNGDLAFCDCSTESPS GRRSLCYDESALEARKKNKPAGSALALSEQMGISLLDEETYRHLQTLGAFDLKTSSWIQTPDVIRQKGGALFCDRRYDHI FVYHNGADSYYAARGFRGMITI >Mature_181_residues SKLSHEETLELLHTLESRFTENVERHSNVVWSDVLERIQIDQDKLTSLALMEETGGEPDVIRLPNGDLAFCDCSTESPSG RRSLCYDESALEARKKNKPAGSALALSEQMGISLLDEETYRHLQTLGAFDLKTSSWIQTPDVIRQKGGALFCDRRYDHIF VYHNGADSYYAARGFRGMITI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20546; Mature: 20415
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLSHEETLELLHTLESRFTENVERHSNVVWSDVLERIQIDQDKLTSLALMEETGGEPD CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC VIRLPNGDLAFCDCSTESPSGRRSLCYDESALEARKKNKPAGSALALSEQMGISLLDEET EEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEHHHCCCCHHHHHH YRHLQTLGAFDLKTSSWIQTPDVIRQKGGALFCDRRYDHIFVYHNGADSYYAARGFRGMI HHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCEEEEEECCCCCCCHHCCCCEEE TI CC >Mature Secondary Structure SKLSHEETLELLHTLESRFTENVERHSNVVWSDVLERIQIDQDKLTSLALMEETGGEPD CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC VIRLPNGDLAFCDCSTESPSGRRSLCYDESALEARKKNKPAGSALALSEQMGISLLDEET EEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEHHHCCCCHHHHHH YRHLQTLGAFDLKTSSWIQTPDVIRQKGGALFCDRRYDHIFVYHNGADSYYAARGFRGMI HHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCEEEEEECCCCCCCHHCCCCEEE TI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA