Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229916146

Identifier: 229916146

GI number: 229916146

Start: 378457

End: 379461

Strand: Direct

Name: 229916146

Synonym: EAT1b_0415

Alternate gene names: NA

Gene position: 378457-379461 (Clockwise)

Preceding gene: 229916141

Following gene: 229916150

Centisome position: 12.62

GC content: 49.05

Gene sequence:

>1005_bases
ATGACGAAACGAAGAAAAGACTATCCGCTCCCGGAATTTATTGAAACCTACCTCTATCATCTCGGCGCCAGCGGTCGTCA
ACCCTCGACGCTTAAGCGATATCGCTACGACTTGATCGACGTGCACAAATACTTTCACGACCATAATGTCGAACTGAACG
AACCGACGGACTGGTTAGACGTTCCCCTTGAATCGTGGAAGACATTCGTGAATGACTTCTTAATCGAAGAGAAGCACTAT
CAACAGGCGACTGTCGCACGAATCGTCACGGTCATCAATAGCCTGACCCAATTTTTAAATCCGCTTCGTAAAAAGATGCT
TGCCTATTCCCAACCGGCACATACGTTGACAGTCGACCAAGTCGCGCTCGAATCTGAATTCGACCGACTCGTTCAAACGA
TTCGTTCGACGAGAGGACTGAGTGAGAATCAGCTCCAAGCTCATCCTTATCTCGTCAATCGGAACGAACTGATTGTGACG
CTTTTTTATAAATATGGATTGCGTGTCCATCACATCATTCGTTTGCGAATGAGCGACTTGCATCTGGCCGATCACACCTT
CGACGTGTATGATCGTCTCGGAAACCGGTTCACGTTGAAGCTGTCACAGGAAGATCAATCATTGCTCATGAATTACCTGG
CTGATATCCCGACCCCGGTACGACCACGTTGGTACTCCGAAGATCCGGTCTTCGTCTCATTCGATTTCGCCCGGATGACG
TTCCGCTGGGTGTATGCGAAGAATCAACCGAAGCAACTGACGATTGTCATGATCACAAAGATGATGCGACAGTTGAACGA
GCGGAGTGGGCTCACGCGCTCCGTCACCCCATCGATGCTTCGAAACGCCCATGTGTTGAAGACATATGCTGGCGATATGA
CACCATCCGAACGGATGAATATCACCTGTATGCATAAGGAATCTTCCCTTCGCCGGTATGAACAGGCGTATGAAGAGTTT
GGAACTGAACTGTTCGAGTCAGATGAAAGACCCGCCCTCTCGTGA

Upstream 100 bases:

>100_bases
TAATCCCTCATTCCATAAAGTCTCACCTTCCATCTTACCACGAATCAGCGTATAGAGAACGTCCGTTTGTGGTAGGATAA
AGGAAGAAGGAGGCTCGACC

Downstream 100 bases:

>100_bases
AGGGTGGGTCATGTTTTTGTCTGTTTATAAGTGTTATCGAAATATGGCACGTAGGACATTCATAACTAAATAATGATTAA
GCCGATTATACTTTATTTGG

Product: site-specific recombinase, phage integrase family

Products: NA

Alternate protein names: Phage Integrase; DNA Integration/Recombination/Invertion Protein; Recombinase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Domain Protein SAM Domain Protein; Phage Integrase/Recombinase Family Protein; Phage Integrase Domain/SAM Domain-Containing Protein; Site-Specific Recombinase; Integrase/Recombinase Family Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MTKRRKDYPLPEFIETYLYHLGASGRQPSTLKRYRYDLIDVHKYFHDHNVELNEPTDWLDVPLESWKTFVNDFLIEEKHY
QQATVARIVTVINSLTQFLNPLRKKMLAYSQPAHTLTVDQVALESEFDRLVQTIRSTRGLSENQLQAHPYLVNRNELIVT
LFYKYGLRVHHIIRLRMSDLHLADHTFDVYDRLGNRFTLKLSQEDQSLLMNYLADIPTPVRPRWYSEDPVFVSFDFARMT
FRWVYAKNQPKQLTIVMITKMMRQLNERSGLTRSVTPSMLRNAHVLKTYAGDMTPSERMNITCMHKESSLRRYEQAYEEF
GTELFESDERPALS

Sequences:

>Translated_334_residues
MTKRRKDYPLPEFIETYLYHLGASGRQPSTLKRYRYDLIDVHKYFHDHNVELNEPTDWLDVPLESWKTFVNDFLIEEKHY
QQATVARIVTVINSLTQFLNPLRKKMLAYSQPAHTLTVDQVALESEFDRLVQTIRSTRGLSENQLQAHPYLVNRNELIVT
LFYKYGLRVHHIIRLRMSDLHLADHTFDVYDRLGNRFTLKLSQEDQSLLMNYLADIPTPVRPRWYSEDPVFVSFDFARMT
FRWVYAKNQPKQLTIVMITKMMRQLNERSGLTRSVTPSMLRNAHVLKTYAGDMTPSERMNITCMHKESSLRRYEQAYEEF
GTELFESDERPALS
>Mature_333_residues
TKRRKDYPLPEFIETYLYHLGASGRQPSTLKRYRYDLIDVHKYFHDHNVELNEPTDWLDVPLESWKTFVNDFLIEEKHYQ
QATVARIVTVINSLTQFLNPLRKKMLAYSQPAHTLTVDQVALESEFDRLVQTIRSTRGLSENQLQAHPYLVNRNELIVTL
FYKYGLRVHHIIRLRMSDLHLADHTFDVYDRLGNRFTLKLSQEDQSLLMNYLADIPTPVRPRWYSEDPVFVSFDFARMTF
RWVYAKNQPKQLTIVMITKMMRQLNERSGLTRSVTPSMLRNAHVLKTYAGDMTPSERMNITCMHKESSLRRYEQAYEEFG
TELFESDERPALS

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39610; Mature: 39479

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRRKDYPLPEFIETYLYHLGASGRQPSTLKRYRYDLIDVHKYFHDHNVELNEPTDWLD
CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VPLESWKTFVNDFLIEEKHYQQATVARIVTVINSLTQFLNPLRKKMLAYSQPAHTLTVDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH
VALESEFDRLVQTIRSTRGLSENQLQAHPYLVNRNELIVTLFYKYGLRVHHIIRLRMSDL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEHHHHCCHHHHHHHHHHHHH
HLADHTFDVYDRLGNRFTLKLSQEDQSLLMNYLADIPTPVRPRWYSEDPVFVSFDFARMT
HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHE
FRWVYAKNQPKQLTIVMITKMMRQLNERSGLTRSVTPSMLRNAHVLKTYAGDMTPSERMN
EEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCC
ITCMHKESSLRRYEQAYEEFGTELFESDERPALS
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TKRRKDYPLPEFIETYLYHLGASGRQPSTLKRYRYDLIDVHKYFHDHNVELNEPTDWLD
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VPLESWKTFVNDFLIEEKHYQQATVARIVTVINSLTQFLNPLRKKMLAYSQPAHTLTVDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH
VALESEFDRLVQTIRSTRGLSENQLQAHPYLVNRNELIVTLFYKYGLRVHHIIRLRMSDL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEHHHHCCHHHHHHHHHHHHH
HLADHTFDVYDRLGNRFTLKLSQEDQSLLMNYLADIPTPVRPRWYSEDPVFVSFDFARMT
HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHE
FRWVYAKNQPKQLTIVMITKMMRQLNERSGLTRSVTPSMLRNAHVLKTYAGDMTPSERMN
EEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCC
ITCMHKESSLRRYEQAYEEFGTELFESDERPALS
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA