| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yqjV [H]
Identifier: 229916030
GI number: 229916030
Start: 266102
End: 267346
Strand: Direct
Name: yqjV [H]
Synonym: EAT1b_0298
Alternate gene names: 229916030
Gene position: 266102-267346 (Clockwise)
Preceding gene: 229916029
Following gene: 229916031
Centisome position: 8.87
GC content: 50.76
Gene sequence:
>1245_bases ATGTTTCAATCACTCAAGCGGCTCGACCGCAACATTTGGATTCGTTTCTTAGGGGAGACGATTACGGGAATCATGATGTT CATGATTGCCCCATTCCTTGTTCTCTATTATAGTGACCAGTTAGACAGCTACCTTCAAGTCGGAATCATCATGGCTACTG GCCCGATCATGGCGCTCCTTGGTTCGATGATCGGAGGACGGCTAGCAGACCTGTATGGTCGAAAACCAATCATGATGATC GCCATCATCGGGGACGCACTTGCCCTCATCGGATTTGCGTTCGCCGACTCGTTCTGGCCGCTTCTTTTATTGAACGCGAT GCTCGGACTGACGAACTCGCTCTTCCACCCTGCCGCAAGCGCGATGGTCGCCGATGTCACGGAGCCAGAGCATATGAACG AAGCATTCGGACTTTTACGGATGGGACATAACATCGGCGCTGCATTCGGTCCACTTCTTGGTAGTGCGGTGCTGTTCATC GACCGCGAGCTCATCTTCTTTGCGGCGGCATTCGTCTTTGGACTATATGCGATTTCGCTCGGCACGTTCATACATGAGTC GTTGCCCGAGTTTACGGAAGATGAGACTCCAAGCAACCGGGAAGTGTTGCGCGTCTTTTATAACGATCGCGTGTTTCTCG TCTTCATCTTTGCGGGTATATTCATATCAATGGGATTCTCCGTCGTCGAGAGCATGCTACCACTCTTTTTAAAAGAATCG CTCCCGACGTATACCGCACAACAGAACCCATTCCCGTATCTGTTAGCACTGAATGGAATCATGGTTGTCTTTTTCCAGTT CCCGATTGCTTCAAAACTCGGGAACAAGCCGTTCGGTAAAGTCATGCTGGCCGGAGCAACCGTATTCGGTATCGGTATGA TCTTGCTTGCGATTGTGCCTAGAGCCTTGTTCGCACTCGATACCCCTTACGTGCCACTCGTCGGGATCTTACTCGCCGTA TATGCGTTTTATACGTTAGGTGAGATGATCATGTCCCCTGTTCAGCAGACATTCATCGCCTTGATCGCACCGGAGAATAT GCGTGGTGCCTATAACGGTGCAGCGAGTATCCAATGGCTGATCGGCGGTGTCACGGCACCAATCATCGCAAGTGTCTTTT TTGACAATCGTGCCGGACACATCGCTTTGATCCTCATCGGTGGAGCGAGTTGTTTATCAGGCATCATCTATTGGCAGCTC GGACGTCATGTCCAAGCGACGGAAGCAAAGCAAAAGACGGCTTAA
Upstream 100 bases:
>100_bases CTGCCTATCGAGGCATGCATAAACAACGTGGGACGTCGTATGCCTTCATGCATATGACGTCCCTTTTGTGTCTAAAAATT AAATAAAGCAGGTGACCTGT
Downstream 100 bases:
>100_bases CCGCTCATTGACCACACTCTCTGATTTCGGAAGTGTGGTCTTTTCATTCTTTTCATCTTTATTAAAATTTGAAATTATCA TTCAATTCACTTTACAATCA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MFQSLKRLDRNIWIRFLGETITGIMMFMIAPFLVLYYSDQLDSYLQVGIIMATGPIMALLGSMIGGRLADLYGRKPIMMI AIIGDALALIGFAFADSFWPLLLLNAMLGLTNSLFHPAASAMVADVTEPEHMNEAFGLLRMGHNIGAAFGPLLGSAVLFI DRELIFFAAAFVFGLYAISLGTFIHESLPEFTEDETPSNREVLRVFYNDRVFLVFIFAGIFISMGFSVVESMLPLFLKES LPTYTAQQNPFPYLLALNGIMVVFFQFPIASKLGNKPFGKVMLAGATVFGIGMILLAIVPRALFALDTPYVPLVGILLAV YAFYTLGEMIMSPVQQTFIALIAPENMRGAYNGAASIQWLIGGVTAPIIASVFFDNRAGHIALILIGGASCLSGIIYWQL GRHVQATEAKQKTA
Sequences:
>Translated_414_residues MFQSLKRLDRNIWIRFLGETITGIMMFMIAPFLVLYYSDQLDSYLQVGIIMATGPIMALLGSMIGGRLADLYGRKPIMMI AIIGDALALIGFAFADSFWPLLLLNAMLGLTNSLFHPAASAMVADVTEPEHMNEAFGLLRMGHNIGAAFGPLLGSAVLFI DRELIFFAAAFVFGLYAISLGTFIHESLPEFTEDETPSNREVLRVFYNDRVFLVFIFAGIFISMGFSVVESMLPLFLKES LPTYTAQQNPFPYLLALNGIMVVFFQFPIASKLGNKPFGKVMLAGATVFGIGMILLAIVPRALFALDTPYVPLVGILLAV YAFYTLGEMIMSPVQQTFIALIAPENMRGAYNGAASIQWLIGGVTAPIIASVFFDNRAGHIALILIGGASCLSGIIYWQL GRHVQATEAKQKTA >Mature_414_residues MFQSLKRLDRNIWIRFLGETITGIMMFMIAPFLVLYYSDQLDSYLQVGIIMATGPIMALLGSMIGGRLADLYGRKPIMMI AIIGDALALIGFAFADSFWPLLLLNAMLGLTNSLFHPAASAMVADVTEPEHMNEAFGLLRMGHNIGAAFGPLLGSAVLFI DRELIFFAAAFVFGLYAISLGTFIHESLPEFTEDETPSNREVLRVFYNDRVFLVFIFAGIFISMGFSVVESMLPLFLKES LPTYTAQQNPFPYLLALNGIMVVFFQFPIASKLGNKPFGKVMLAGATVFGIGMILLAIVPRALFALDTPYVPLVGILLAV YAFYTLGEMIMSPVQQTFIALIAPENMRGAYNGAASIQWLIGGVTAPIIASVFFDNRAGHIALILIGGASCLSGIIYWQL GRHVQATEAKQKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081828, Length=335, Percent_Identity=26.2686567164179, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1787815, Length=346, Percent_Identity=25.1445086705202, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45251; Mature: 45251
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQSLKRLDRNIWIRFLGETITGIMMFMIAPFLVLYYSDQLDSYLQVGIIMATGPIMALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GSMIGGRLADLYGRKPIMMIAIIGDALALIGFAFADSFWPLLLLNAMLGLTNSLFHPAAS HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMVADVTEPEHMNEAFGLLRMGHNIGAAFGPLLGSAVLFIDRELIFFAAAFVFGLYAISL HHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTFIHESLPEFTEDETPSNREVLRVFYNDRVFLVFIFAGIFISMGFSVVESMLPLFLKES HHHHHHHCCHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPTYTAQQNPFPYLLALNGIMVVFFQFPIASKLGNKPFGKVMLAGATVFGIGMILLAIVP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RALFALDTPYVPLVGILLAVYAFYTLGEMIMSPVQQTFIALIAPENMRGAYNGAASIQWL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH IGGVTAPIIASVFFDNRAGHIALILIGGASCLSGIIYWQLGRHVQATEAKQKTA HHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure MFQSLKRLDRNIWIRFLGETITGIMMFMIAPFLVLYYSDQLDSYLQVGIIMATGPIMALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GSMIGGRLADLYGRKPIMMIAIIGDALALIGFAFADSFWPLLLLNAMLGLTNSLFHPAAS HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMVADVTEPEHMNEAFGLLRMGHNIGAAFGPLLGSAVLFIDRELIFFAAAFVFGLYAISL HHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTFIHESLPEFTEDETPSNREVLRVFYNDRVFLVFIFAGIFISMGFSVVESMLPLFLKES HHHHHHHCCHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPTYTAQQNPFPYLLALNGIMVVFFQFPIASKLGNKPFGKVMLAGATVFGIGMILLAIVP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RALFALDTPYVPLVGILLAVYAFYTLGEMIMSPVQQTFIALIAPENMRGAYNGAASIQWL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH IGGVTAPIIASVFFDNRAGHIALILIGGASCLSGIIYWQLGRHVQATEAKQKTA HHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]