Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yueF [H]

Identifier: 229916029

GI number: 229916029

Start: 264732

End: 265832

Strand: Direct

Name: yueF [H]

Synonym: EAT1b_0297

Alternate gene names: 229916029

Gene position: 264732-265832 (Clockwise)

Preceding gene: 229916023

Following gene: 229916030

Centisome position: 8.82

GC content: 45.96

Gene sequence:

>1101_bases
TTGGAGCTTAATCGTCAACTTATTTGGAAACTGAGTGTAATCGGACTGATCTTGCTCGTCTTATGGCGTGTCATCAGTGA
ACCGGATACCATCTCACGTGTCTTACAATACACGTTTCAGTTACTGACCCCTATCATCATGGGGATCGCCATCGCCTTGT
TACTCAACACCGTACTCTCGTATATTGAAGAACGGTTCCACTTGAAGCGATATCAAGGACTACTCATCGTCTATATCACG
TTCATCGGCATCTTGGCAATTTCGGTCGTCACGTTGTTCCCGCGGATTTACTCGAGTCTGTCATCACTCATCAATGAGTT
ACCGGTTTATATCCGTCAAATCGACGTGTTTTTAGGTGAAGTGAACAATTACTTGAAAGACTATAACGCGACGATCGCCC
AAGCGATTGATTTTGCGCGCTTCGAGGATCGTTACTCTGGATGGGTCGAGACGGCCGTCCTCTCTTCCGTTAGTTATGTC
TCTAGTTTTACAATGACATTGATCAACTTCTTGATTGGGATTGTGATCTCCATCTACTTGTTAAAGGACAAAGAAGTCTT
CGCTCGTATGTTCAAGCGTCTTCTCTATGCGCTATTACCCGTCGGCACTGCGAAGACGACAATCGATATCTTTCAAGAGA
TGGATTATATCTTTAAGCGATATATCATTGGGAAGTCGCTCGACTGTCTGATTATTGGAGTGCTAGCAGTCATCGGACTC
TTGATCATCGGGGCCCCATATGCCCTACTTCTCGGAGTCATCGTCGGCGTCTTAAACTTCATCCCATATGTCGGACCGCT
ACTCGGGATGATCCCAGCGTTTATCATCACCTATTTCTATGATCCGTTCACCGCCGTATTGGTACTCTTGTTCATCTTCT
TGTTACAGCAGTTTGACGGATTGTGGCTCGGACCGAAGATTCTCGGAGATAGTGTCGGCATCACACCATTTTGGGTCATC
ACATCGATTATCATCGGAGGAAGCCTGTTCGGCCTCATCGGGATGTTCGTGAGCGTGCCGATCACGGCCATGATTCAAGT
CGTCTTGTCTCGCCTCATCGATTATCGACTGAACCGAAAAAATCTAAATGAATTACTTTGA

Upstream 100 bases:

>100_bases
GTCAAACATTTTTTTCAAAGAGAACATCTATTGAATCCTTTTCAAAAAACATTCATAGTAAAAGAGTAGAAAAATTATAT
TTGTATGAGGGGATAGAGCA

Downstream 100 bases:

>100_bases
TTCACCTCATAAATTTGTTGACACATTGAGGAAATGTGTCATACAGTTGAAGAGAAGAACACAATTAACAGAAAGGAGAG
GTTCCCATGTCAGTAGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MELNRQLIWKLSVIGLILLVLWRVISEPDTISRVLQYTFQLLTPIIMGIAIALLLNTVLSYIEERFHLKRYQGLLIVYIT
FIGILAISVVTLFPRIYSSLSSLINELPVYIRQIDVFLGEVNNYLKDYNATIAQAIDFARFEDRYSGWVETAVLSSVSYV
SSFTMTLINFLIGIVISIYLLKDKEVFARMFKRLLYALLPVGTAKTTIDIFQEMDYIFKRYIIGKSLDCLIIGVLAVIGL
LIIGAPYALLLGVIVGVLNFIPYVGPLLGMIPAFIITYFYDPFTAVLVLLFIFLLQQFDGLWLGPKILGDSVGITPFWVI
TSIIIGGSLFGLIGMFVSVPITAMIQVVLSRLIDYRLNRKNLNELL

Sequences:

>Translated_366_residues
MELNRQLIWKLSVIGLILLVLWRVISEPDTISRVLQYTFQLLTPIIMGIAIALLLNTVLSYIEERFHLKRYQGLLIVYIT
FIGILAISVVTLFPRIYSSLSSLINELPVYIRQIDVFLGEVNNYLKDYNATIAQAIDFARFEDRYSGWVETAVLSSVSYV
SSFTMTLINFLIGIVISIYLLKDKEVFARMFKRLLYALLPVGTAKTTIDIFQEMDYIFKRYIIGKSLDCLIIGVLAVIGL
LIIGAPYALLLGVIVGVLNFIPYVGPLLGMIPAFIITYFYDPFTAVLVLLFIFLLQQFDGLWLGPKILGDSVGITPFWVI
TSIIIGGSLFGLIGMFVSVPITAMIQVVLSRLIDYRLNRKNLNELL
>Mature_366_residues
MELNRQLIWKLSVIGLILLVLWRVISEPDTISRVLQYTFQLLTPIIMGIAIALLLNTVLSYIEERFHLKRYQGLLIVYIT
FIGILAISVVTLFPRIYSSLSSLINELPVYIRQIDVFLGEVNNYLKDYNATIAQAIDFARFEDRYSGWVETAVLSSVSYV
SSFTMTLINFLIGIVISIYLLKDKEVFARMFKRLLYALLPVGTAKTTIDIFQEMDYIFKRYIIGKSLDCLIIGVLAVIGL
LIIGAPYALLLGVIVGVLNFIPYVGPLLGMIPAFIITYFYDPFTAVLVLLFIFLLQQFDGLWLGPKILGDSVGITPFWVI
TSIIIGGSLFGLIGMFVSVPITAMIQVVLSRLIDYRLNRKNLNELL

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=359, Percent_Identity=25.0696378830084, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082271, Length=303, Percent_Identity=23.1023102310231, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41352; Mature: 41352

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCC
>Mature Secondary Structure
MELNRQLIWKLSVIGLILLVLWRVISEPDTISRVLQYTFQLLTPIIMGIAIALLLNTVLS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIEERFHLKRYQGLLIVYITFIGILAISVVTLFPRIYSSLSSLINELPVYIRQIDVFLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNNYLKDYNATIAQAIDFARFEDRYSGWVETAVLSSVSYVSSFTMTLINFLIGIVISIYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKDKEVFARMFKRLLYALLPVGTAKTTIDIFQEMDYIFKRYIIGKSLDCLIIGVLAVIGL
HCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LIIGAPYALLLGVIVGVLNFIPYVGPLLGMIPAFIITYFYDPFTAVLVLLFIFLLQQFDG
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LWLGPKILGDSVGITPFWVITSIIIGGSLFGLIGMFVSVPITAMIQVVLSRLIDYRLNRK
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
NLNELL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]