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The map label for this gene is rmuC [H]

Identifier: 229587048

GI number: 229587048

Start: 991973

End: 993259

Strand: Direct

Name: rmuC [H]

Synonym: RAF_ORF0962

Alternate gene names: 229587048

Gene position: 991973-993259 (Clockwise)

Preceding gene: 229587047

Following gene: 229587049

Centisome position: 77.59

GC content: 33.8

Gene sequence:

>1287_bases
ATGCCTTATTTATTACCCACTATTATAACTACTCTACTTATTTTATTAGCGCTAATAATTTGGTTTTATGTAAAAACTCA
AGCCTTAAGGACACAGCTACAATTTTTATCAGAACAGAATCTAGAAATTAGCAATAACAACCAATTATTAAATCAAGAAA
AGATAGGATATTTACAGAAAATTGAGCAATTGCAGTGTAAAATAGAATATCAAACACAGACTATTAAGGATTCAGAAAAA
ATAAGAGAAGAGTCATTTTCATCGGCTAAAGCTGCGTTATTTGATTTAGGTCAAGATTTGTCTAAACAATTAATAGAGAT
ACATAAAATGGAAAACACGGCGGCAAGAGAGCTAGCCGAGAAAAATATCGCTACTGCTTCAGGAAAATTTAATAGTGAGT
TTGAACGGTTAATTACGATGGTGGGAGCATTAAATAAAGATATAGAGCAATCAAAAGGTACGGTTGATTTGATAAAACAG
TCTCTGCTTTCTCCGATCGGGGCGGGGCTACTTGCTGAGATTACCCTTGAGAATATCTTAAAATCTTCGGGCTTACGTCC
TAATTTAGATTTCATTATGCAATACGGTCTAACTACATTAGATAGCGGGAAGCTAAGACCTGATGCGCTCATTTTTCTTC
CTTCCGGTAATTTAATGGTTATTGATTCTAAAGCTTCAAAGTTTCTTGTAAACGAGCAAGATAATAACATGAGTCTTAAT
AAAACTATGAATTACCATTTAAAATCTTTGGCGAATAAAGAATATGCCGCAAATATTTTAACTAATCTAAACAAAAAGGA
TCAGAGCTTTAACAATGTTATTACTTTAATGTTTTTGCCGACTGAACAAGCAGTTGAGAAAGTTATTGCAGCCGACCCTG
AATTTTTACAAAAAGCTTGGGGCTGTAATATCTTTCCGGTAGGACCTAGCGGCCTTATGAATATGCTATCATTTGCAAAA
TTTCAAATTACCGATCATCGCCGCTCAGAAAATTATAAGGTAATCATTGAAGAAGTGAGAAAGCTATTAAACTCCATCGG
TACTATGGCAGATTATTCTCAAAAGATCGGTAATAACCTGCATAATATGGTTACTAATTACGATAAATTTGCTGCCTCGT
TTAATCGTAATTTTATGTCAAGAGTAAAGAATATTCAAAAACTCGGTATTGATTCAGGGAATAAAGCCATGCCGGCTACC
TTAGAGCGTTATCAAATCGTTTCCTCTAAATCTGAGATTATTGAAGTGGAAGCAGAAAATCCACCACAAATAGCAGAAAA
ATTATAA

Upstream 100 bases:

>100_bases
TCACAATGACTATATCAACCTTTTCTAGGCAATGCCCAAATAATTAGTGCAAATTATGCGGTACTTTAGTATTATTTAAC
ATTAAACTTTGCTTCATTCT

Downstream 100 bases:

>100_bases
ATAAATTTTTCTCGTAATAGGTAATTTAAATGTTAAAAAAACTTTCCATAATCTGTATAGCCATATTGTTACTATGTGTA
AGCATATAAGATTAAAGCTC

Product: RmuC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MPYLLPTIITTLLILLALIIWFYVKTQALRTQLQFLSEQNLEISNNNQLLNQEKIGYLQKIEQLQCKIEYQTQTIKDSEK
IREESFSSAKAALFDLGQDLSKQLIEIHKMENTAARELAEKNIATASGKFNSEFERLITMVGALNKDIEQSKGTVDLIKQ
SLLSPIGAGLLAEITLENILKSSGLRPNLDFIMQYGLTTLDSGKLRPDALIFLPSGNLMVIDSKASKFLVNEQDNNMSLN
KTMNYHLKSLANKEYAANILTNLNKKDQSFNNVITLMFLPTEQAVEKVIAADPEFLQKAWGCNIFPVGPSGLMNMLSFAK
FQITDHRRSENYKVIIEEVRKLLNSIGTMADYSQKIGNNLHNMVTNYDKFAASFNRNFMSRVKNIQKLGIDSGNKAMPAT
LERYQIVSSKSEIIEVEAENPPQIAEKL

Sequences:

>Translated_428_residues
MPYLLPTIITTLLILLALIIWFYVKTQALRTQLQFLSEQNLEISNNNQLLNQEKIGYLQKIEQLQCKIEYQTQTIKDSEK
IREESFSSAKAALFDLGQDLSKQLIEIHKMENTAARELAEKNIATASGKFNSEFERLITMVGALNKDIEQSKGTVDLIKQ
SLLSPIGAGLLAEITLENILKSSGLRPNLDFIMQYGLTTLDSGKLRPDALIFLPSGNLMVIDSKASKFLVNEQDNNMSLN
KTMNYHLKSLANKEYAANILTNLNKKDQSFNNVITLMFLPTEQAVEKVIAADPEFLQKAWGCNIFPVGPSGLMNMLSFAK
FQITDHRRSENYKVIIEEVRKLLNSIGTMADYSQKIGNNLHNMVTNYDKFAASFNRNFMSRVKNIQKLGIDSGNKAMPAT
LERYQIVSSKSEIIEVEAENPPQIAEKL
>Mature_427_residues
PYLLPTIITTLLILLALIIWFYVKTQALRTQLQFLSEQNLEISNNNQLLNQEKIGYLQKIEQLQCKIEYQTQTIKDSEKI
REESFSSAKAALFDLGQDLSKQLIEIHKMENTAARELAEKNIATASGKFNSEFERLITMVGALNKDIEQSKGTVDLIKQS
LLSPIGAGLLAEITLENILKSSGLRPNLDFIMQYGLTTLDSGKLRPDALIFLPSGNLMVIDSKASKFLVNEQDNNMSLNK
TMNYHLKSLANKEYAANILTNLNKKDQSFNNVITLMFLPTEQAVEKVIAADPEFLQKAWGCNIFPVGPSGLMNMLSFAKF
QITDHRRSENYKVIIEEVRKLLNSIGTMADYSQKIGNNLHNMVTNYDKFAASFNRNFMSRVKNIQKLGIDSGNKAMPATL
ERYQIVSSKSEIIEVEAENPPQIAEKL

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=257, Percent_Identity=26.4591439688716, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 48272; Mature: 48141

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYLLPTIITTLLILLALIIWFYVKTQALRTQLQFLSEQNLEISNNNQLLNQEKIGYLQK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHCHHHHHHHHH
IEQLQCKIEYQTQTIKDSEKIREESFSSAKAALFDLGQDLSKQLIEIHKMENTAARELAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNIATASGKFNSEFERLITMVGALNKDIEQSKGTVDLIKQSLLSPIGAGLLAEITLENIL
HHCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
KSSGLRPNLDFIMQYGLTTLDSGKLRPDALIFLPSGNLMVIDSKASKFLVNEQDNNMSLN
HHCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEECCCCCCCCHH
KTMNYHLKSLANKEYAANILTNLNKKDQSFNNVITLMFLPTEQAVEKVIAADPEFLQKAW
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHH
GCNIFPVGPSGLMNMLSFAKFQITDHRRSENYKVIIEEVRKLLNSIGTMADYSQKIGNNL
CCCEEECCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
HNMVTNYDKFAASFNRNFMSRVKNIQKLGIDSGNKAMPATLERYQIVSSKSEIIEVEAEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC
PPQIAEKL
CHHHHHCC
>Mature Secondary Structure 
PYLLPTIITTLLILLALIIWFYVKTQALRTQLQFLSEQNLEISNNNQLLNQEKIGYLQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHCHHHHHHHHH
IEQLQCKIEYQTQTIKDSEKIREESFSSAKAALFDLGQDLSKQLIEIHKMENTAARELAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNIATASGKFNSEFERLITMVGALNKDIEQSKGTVDLIKQSLLSPIGAGLLAEITLENIL
HHCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
KSSGLRPNLDFIMQYGLTTLDSGKLRPDALIFLPSGNLMVIDSKASKFLVNEQDNNMSLN
HHCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEECCCCCCCCHH
KTMNYHLKSLANKEYAANILTNLNKKDQSFNNVITLMFLPTEQAVEKVIAADPEFLQKAW
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHH
GCNIFPVGPSGLMNMLSFAKFQITDHRRSENYKVIIEEVRKLLNSIGTMADYSQKIGNNL
CCCEEECCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
HNMVTNYDKFAASFNRNFMSRVKNIQKLGIDSGNKAMPATLERYQIVSSKSEIIEVEAEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC
PPQIAEKL
CHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]